KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139378478
Entry
139378478         CDS       T10872                                 
Name
(RefSeq) periodic tryptophan protein 1 homolog
  KO
K14791  periodic tryptophan protein 1
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ocla03009]
    139378478
Ribosome biogenesis [BR:ocla03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    139378478
  Pre-60S particles
   Other pre-60S particles
    139378478
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR5 WD40 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_RIG_2nd WDR55 EIF3I Beta-prop_WDR3_2nd Beta-prop_EIPR1 Beta-prop_EML_2 WD40_Gbeta WD40_RFWD3 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_EML WD_LRWD1 Beta-prop_WDR41 Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP ANAPC4_WD40 Beta-prop_Aladin Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 Beta-prop_ACSF4
Other DBs
NCBI-GeneID: 139378478
NCBI-ProteinID: XP_070976780
LinkDB
Position
21:9055661..9063574
AA seq 496 aa
MSSQITCVGWVKRGISKETPDKVELSKEELQHIIAEAKEQLGERVGEEEEEEEEDEGMAS
GQEQSDEAEAVQGQEPEQDENEAGREEADELATYGLDRYDEEDSVTANLGDSLAGLTVFS
TNEEDPYITIKDTDQYEREDFQIKPNDNLIISGRAEKDCCNLEIHVYNSEEESLYIHHDI
LLPAYPLCVEWLNFDPSPEGTGNYAAVGNMTPQIDVWDLDVVDCLEPAFTLGSKKASKKK
RKNKKAAAEPVEGHTDAVLDLSWNKLVRNVLASGSADETVILWDLAQGKPATTLRKHTDK
VQTLMFHPFEAQTLISGSYDKSAILYDCRSPDSSHRTWRFSGQVERVAWNHFSPCNFLAS
TEDGFVYCLDARSDKPVFTLRAHDGEVSGLDLSSQIRGCLVTSSADKHVKIWDILGNKPN
LVHTRDMKMGVLFCAACCPDMPFVYAFGGQRDGLRVWDISDVAAVAEVFGNRERLVATTA
PEASSSTSSTADMELS
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgagttctcaaatcacttgtgttggatgggtaaagcgtggcatttcgaaggaaacacca
gataaggtggagttgagcaaagaagaattgcaacacataatagcagaggcaaaagaacaa
ttgggtgaacgtgtaggtgaagaggaggaggaggaggaggaggatgaaggcatggccagc
gggcaggaacagagtgacgaggcagaagctgttcagggacaggagccagagcaagatgaa
aatgaagcaggaagggaggaagcagatgaactagcaacgtatggtttggatagatatgat
gaggaagactcggtgactgccaaccttggtgacagccttgccggcctcacagtgttcagc
accaatgaggaggatccttacattaccatcaaagacacagaccagtatgagcgagaggac
tttcaaatcaagcccaatgataacctcatcatttcaggcagagcagagaaggactgctgc
aacctggagattcacgtatacaactccgaggaggaatccctctatattcaccatgacata
ctcctaccagcctatccactgtgtgtggaatggcttaactttgaccctagtccagaaggc
actggcaattatgcggctgtaggcaacatgacaccgcagattgacgtgtgggacctggat
gtggtggactgcctagagcctgccttcactctggggagcaagaaggcctccaagaagaaa
aggaaaaacaaaaaggctgcagcagagccagtggaaggtcatacagatgctgtactggac
ttatcctggaacaaactggtccgcaacgtcttggccagtgggtcagctgacgaaaccgtg
atcctgtgggatctggcacagggaaagccggccacaacactgcgcaaacacactgacaag
gttcagacgttgatgttccacccctttgaagctcagaccctgatatcaggatcatacgat
aagtcggcaatcctgtatgactgccgcagcccggacagcagccatcgcacttggaggttt
agcgggcaggtggaaagggtcgcctggaaccacttctcgccctgcaacttcctggcgagc
acagaggacggctttgtttactgtctggacgcacgctcggacaagccagtgtttacgcta
agggcacatgacggagaggtgtcaggcttggaccttagcagccagatccggggatgcttg
gtcacctcgtcagcagacaaacacgtcaagatttgggacatcttggggaacaagcccaat
ttagttcacacccgggacatgaaaatgggggtgctgttctgtgcagcgtgctgtcctgac
atgccctttgtatatgcctttggaggacagagggatggcctgcgggtttgggacataagt
gatgtggcagcagtcgctgaggtgtttggcaatcgggagcggttggtggcaaccacagcg
cctgaggcatccagcagtacttcatccacagcagatatggagctttcctag

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