Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139378509
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Entry
139378509 CDS
T10872
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2-like
KO
K05629
atrophin-1 interacting protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139378509
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
MAGI_u1
PDZ_2
WW
Guanylate_kin
DUF6288
Motif
Other DBs
NCBI-GeneID:
139378509
NCBI-ProteinID:
XP_070976834
LinkDB
All DBs
Position
21:10246806..10518047
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AA seq
1689 aa
AA seq
DB search
MSKSLKKKNHWTNKVYESVLCRNKEGELGFELKGGAENGQFPYLGEVRQGKVACQSGRLS
QDELLLEVNETPVAGLTIRDVHAVVRHSKDPVRLKCVKQGGVIDKDLRHYLNLRFQKASV
DHELQQIIRDNLYLRTIPCTTRQPKEGEVPGVDYNFVTVDRFMELEKSGALLESGTYEEN
YYGTPKPPCEPSPLLLNVTDQLLPGARPSSKGKRKRNKSVSNMEKAGIEPPEDEEEERPV
VNGNGNGITPESSEHEDKSTDVSSGDVPTQTCPPTETPTTPNNEVPQEEGGELAKSPPKP
DENESELGPLPENWEMAYTEKGEVYFIDHNTKTTSWLDPRLAKKAKPPEECKEDELPYGW
EKIDDPIYGSYYVDHINRRTQFENPVLEAKRRVQQHQQMQEQGLSSLPLPTIYRVVEEVP
LSATLPRATLAHIGPAPERCQSLSDLSQSLPPGHRVSLLGLHTHTPPASITNSPLRRPHR
ARRDTSCCPHLHLHQSLHAFVVEPAAVGCSPLWCSLKKPLFTRDATQLKGSFLSTALQKS
NMGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMDTGDVIVYINDVCVLGTTHADVVKL
FQSVPIGQSVTLVLCRGYQLPYDPEDPGASAGTTTTLLSPLGLMEQRPLLVNGRSNYDSY
MDYISRTARFVQEHGDQHLNAHHHHQPPPPPHPGDTHLDGSSLTPGGPHGEDSVSMASSG
ATQAELLTLTMVKGAEGFGFTIADSPTGQRVKQVLEPQGCPGLCEGDLIIDINQQGVQGL
SHTQVVELLKECAVGAETSLVIQRGGGGHYSPWKTPKQVLEQWDAAQGQGGGQGSPQTSL
SAPVVPHNAPFLTRHLHRASVPDSALPEGFDLSRPDPYDLYEKSRAIYENSRQPGLPRTI
FSVDHSGAEYQEVEVHLRRQKSGFGFRILGGDEAGQPVSPDTREKILIGAIIEKSPADRD
GRLRPGDELIFMDGIPVAGKPHRYVIDLMHGAARNGQVNLTIRRRLQGPGEPCPENGRSP
GSVSTQHSSPRSDFTNVTYPGNNAAPPTDAMGTGSTTDGEPTSSVQQPPSDVIIHRKESE
GFGFVIISSLNRPETAAAISVPHKIGRIIDGSPADRCGKLKVGDRILAVNSQSIVNMPHA
DIVKLIKDAGLSVTLRIIPQEELSPSAPSSEKQSPAVTQQHSPQAQPSPAVGQPIPAVTQ
PSPAVTQPSPAVTQPSSLTHQSPITQTPAPPPQIYTHDSSYRSEVKARQDVKPDIRQPPF
TDYRQPPLDYRHPPVADYRQPPTLDYRHPPLMDYRQLSTDPRHFPMPVPHDYRQIQPQMP
QVYQDFDFFTVELEKSVKGFGFSIRGGREYKMDLFVLRLAEDGPAIRNGRMRVGDQIIEI
NGDTTRDMTHARAIELIKSGGRRVRLLLKRGTGQVPEYDSTSPWDARPSASPSLSEVALP
PDTLTMPSPSSHLTPSQQPPGPDLARLPPQEVPREPAVQESRKADRSQSPRKAPTETQNP
DQTGHGRRDRDRPSGSGCSNGRAKQKEGGRSTRRGSCPKEGGPVGRDELLPGGGEPKSSS
RGRSKERIAGESSSTSHGKREPTQSPTKGSKPSYTNSNGNGSSGGTQSGSSSHPDVSVGH
QGEPAQEKPRPREAERGPGETRPCRPNKSTSSSSTAAGRKATVSPGPWKIPGSDKLPSTL
RSGTSTVSR
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaagcctgaagaagaaaaaccactggaccaacaaagtctatgagagtgtcctt
tgcaggaataaggaaggggagcttgggttcgagttgaagggaggcgcggagaatggacag
ttcccatatcttggggaggttaggcaaggcaaggtggcctgccagagcggcagactgtcc
caagatgaactactccttgaggtcaatgaaacgccagtggccggactaaccatcagggac
gtacatgcagtggtcagacacagcaaagaccctgtccgccttaagtgtgtcaaacaaggg
ggcgtcatagacaaggacctgcgtcactaccttaacctgcgcttccagaaggcctcagtg
gaccacgagctccagcagatcattagagacaacctctacctccgcaccataccctgcaca
accaggcagcccaaggagggagaggtcccgggggtggactacaactttgtgactgttgat
cggtttatggaattggagaaaagtggagccttactagagagcggaacttatgaagagaac
tattacggtacccccaagcccccgtgcgagcccagccctctgctgctaaatgtaacagat
cagctcctgccgggcgcccgacccagctccaagggaaagaggaaacggaacaagtcggtc
agcaacatggagaaggccggcatcgagccacccgaggatgaggaagaggagaggcccgtt
gtcaatggcaacggcaatggcatcaccccagagtccagtgaacatgaagacaagagtaca
gatgtctcctcgggggacgtccccacccagacctgtccccccaccgagacccccaccacc
cctaacaacgaagtcccccaggaggaggggggcgagctagccaagtcgccccccaagcca
gatgagaatgagagtgagcttggccccctgccagagaactgggagatggcctacacagag
aagggagaggtgtactttatcgaccacaacaccaagacgacgtcgtggctggacccgcgg
ctggcgaagaaggcgaagccaccagaagaatgcaaagaggacgagctgccgtatggctgg
gagaagatcgatgaccctatttacggaagctactatgtggaccacataaacaggcggaca
cagtttgagaacccagtcttggaagccaagaggagagtccagcaacaccaacaaatgcaa
gagcagggtctgtcctcgctgcccctacctactatctacagagtggtagaggaggtccca
ctctccgccacattacccagagccaccctggcccacatcggacctgccccggagcgctgc
cagagcctcagcgacctctcccagtccctccccccgggccaccgggtgtcgctgttgggc
ctgcacacccacacaccccctgcctccatcaccaactccccactgcggcgcccccaccgt
gcgcggagggatacgtcgtgctgcccacacctgcacctccaccagtcgcttcacgccttt
gtggtagagccggctgctgtgggttgtagccccctgtggtgctctctcaagaagcccctt
ttcacacgggacgccacccagctgaagggcagcttcctgtccacggccctgcagaagagc
aacatgggttttggcttcaccatcatcggaggagacgagccagatgagttcctgcaggtc
aagagtgtcatacctgacggccccgctgcacaggacggaaagatggacacaggtgatgtc
atcgtgtacatcaatgacgtgtgtgtcctgggcaccacccatgccgacgtggtcaagctg
ttccaatcagtgcccatcgggcagagcgtaaccctggtgctgtgccgtggctaccagctg
ccctacgaccccgaggacccgggcgccagcgccggcaccaccaccaccctcctctccccc
ctgggcctgatggagcagcgccccctcctggtcaatggacgctccaactacgacagctac
atggactacatttcgcgcacggcacgcttcgtccaggagcacggtgaccaacatctcaac
gcccaccaccaccatcaaccccctccgccgccgcaccccggcgacacccacctggacggc
tcctccctgacgcccggcgggccgcacggcgaggactcggtgtccatggcgtcatcgggg
gcgacgcaggcggagctgctgacgctgaccatggtgaagggggcggaagggttcgggttc
accatcgcagacagcccgacgggccagagggtgaagcaggtgctggagccccaggggtgt
cctggtctgtgtgaaggggacctgatcatagacatcaaccagcagggagtgcagggcctc
agtcacacccaggtggtggagctgctcaaggagtgtgccgtcggggctgagaccagcctg
gtcatccagaggggtggaggaggtcactattcaccctggaagacccctaaacaggtgttg
gagcagtgggacgcggcccaaggccagggagggggtcagggcagcccccagaccagtctg
tctgcccccgttgtcccccacaacgcccccttcctgacccgccacctccacagggcctca
gtcccagactctgccctccccgagggctttgatctgagcaggcccgacccctatgacctc
tatgagaagtccagggctatctatgagaatagtaggcagccaggcctgccacggaccatc
ttctctgtggaccactcaggggcagagtaccaggaggtggaggtccacctgaggaggcag
aagtccggcttcggcttccgcatccttgggggagacgaggcgggtcagcctgtgagtccg
gacacccgtgagaagattctgattggggccatcatagagaagagccctgcagacagagac
gggcgcctgcggccaggcgatgagctcatcttcatggacgggatcccggtggcggggaag
ccccaccgctacgtcatcgacctgatgcacggcgccgcccgcaatggacaggtcaacctc
accatcaggaggaggctacagggcccaggagagccgtgtccagagaacggccgcagcccc
ggctctgtgtccacccagcacagctccccacgcagcgacttcaccaacgtcacgtatcct
ggcaacaacgcagccccacccactgacgccatgggtacaggtagcaccacagacggagag
ccgacctccagcgtgcagcagccaccgagtgatgtcattatccaccgcaaggagagtgaa
gggtttggattcgtcatcatcagctcgctcaaccggcccgagaccgccgccgccatcagc
gtgccccataagattgggcgtatcatcgacggcagcccggcggaccgctgtggcaaactg
aaggtgggtgaccgcatcctggcggtaaacagccagtccatcgtcaacatgccccacgcc
gacatcgttaagctcatcaaggacgccggcctcagcgtcaccctccggatcataccacag
gaagagctgagcccgtcagcccctagctcagagaagcagagcccagcagtgacccagcag
cacagtcctcaggcccagcccagtcccgccgtgggccagcccatccctgcagtcacccag
cccagccctgcagtcactcagcccagccctgcagtcacccaacccagctccctgacccat
caaagccccatcacacagaccccagcccccccaccccagatctacacccacgacagcagt
tacaggtcagaggtgaaagcgaggcaggatgtgaaaccggacatccgacagcctccattc
acagactacagacagcccccgttggactacagacaccctcctgtagcagactaccgccag
ccacccaccctggactacagacaccctcctctgatggactacagacagctgtccactgac
cccaggcacttccctatgcctgtgccccacgactacagacagatccagccacagatgcca
caggtctaccaggactttgacttcttcaccgtggagctggagaagagtgtgaagggattt
ggcttcagtatccgtggagggagggagtacaagatggacctgtttgtcctgcgactggcc
gaggacggacccgccatccgcaacgggaggatgagggttggggaccagatcattgagatc
aatggggacacaaccagggacatgacccacgcccgggccatcgagctcatcaagtcaggg
ggccggcgggtgcgtctgctcctgaagagaggcacagggcaggtcccagagtatgacagt
acctccccctgggatgcacgcccttcagcctccccaagtctgtcggaagtagccctgccc
ccagacactctgaccatgccatcgccctcatctcatctgaccccgtcccagcagccccca
ggccccgacctggctcgcctgccaccacaggaggtcccgcgggagccggcggtgcaagag
agcaggaaggcggatcgctcccagagcccccggaaggccccgaccgagacgcaaaatccg
gaccagaccggccacgggaggagggaccgggaccggcccagtgggagtggttgcagtaat
gggagggccaagcagaaggaaggtggcaggtccacccgcagagggagctgccccaaagag
ggagggccggtggggagggatgagctgctacctgggggaggggagcccaaaagctcctcc
agggggaggtctaaggagaggatagctggggagagcagcagcacgtcccacgggaaaaga
gaacccacacagtccccgacgaaaggctccaagccctcatacacaaactctaacgggaac
ggcagcagcggtggtactcagagcggcagcagcagtcacccagacgttagtgtcgggcat
cagggggagccggcgcaggagaagcccaggcccagagaggcagagaggggccctggagag
acccggccctgccgccccaacaagagcaccagcagcagcagcacggcagcgggtaggaag
gccactgtgtcccctgggccctggaagatccccggctctgacaagctgcccagcaccctg
cgctcaggcacgtccactgtgagcagataa
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