Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139378519
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Entry
139378519 CDS
T10872
Name
(RefSeq) golgin subfamily B member 1-like isoform X1
KO
K20478
golgin subfamily B member 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139378519
Membrane trafficking [BR:
ocla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
139378519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HALZ
Motif
Other DBs
NCBI-GeneID:
139378519
NCBI-ProteinID:
XP_070976860
LinkDB
All DBs
Position
21:10729075..10752331
Genome browser
AA seq
3096 aa
AA seq
DB search
MFSRLSQGFTNVLQELSGDEPPDGAPQDMLVPQLPPGDAPGAPEESGPGVEEEPLERLAH
LEQLTVHLKEVVRDKDSQLATFETQLKSERETAEARFTKLKLQAKTKMATLNKQIADLKG
QEGATSSPDSSFTSSAPAVEEELQELRKQLSEVSTSAKNLEERLQMSEQALCEKEAVHTE
QVRVLQAVVCEKDVRFQEQIQKHEDELLRVTVQSQNDAELQQVQQALRAAQRRCEEQEEA
MRSRCQVLEMLQGELNNADQQKQILTAQFRQMEQELAEAGRQREQELAEAGRQREEERQQ
WAGWSSQAEAELVALRANLEASEQDRAAQLANLEASEHDRAAQLASLEASERDRSTQMEE
LTVKLECATREREEVTNREVARLEKELAALREEYGEGQRAGEALAELLTGLRSLAGEGVK
EDSPVPTDPAQCLGTLQALEARLERLRVEQRESEERCAQVTHTMETLQEQLDKRTAEGEE
AVARIQQLEQQIGMAARESLVQCVTDPSVEEVTDAEKAQILALEQQLLEKDHELAALRES
LVLAEEQGSNDAFKVSADQILDQSEDTAMAPCDSPTVLPDLLEDTREEDTTLVAEDRSIL
SVSADNESSPEFIEPQSDSPGESKGASSDEMVTSSDSEVAHSSWTLLEAVNQDEGQQSPP
ILQGFSQLQMQSWEENSSEQETSTVQVESSSVIIRETVQVHLSQQGATLFDSDSAPGQVF
AQALADELQNRYSELMVELQRLREAASESQERTQGLEEEIRSLTVAKDEAESQAQRYEEE
LQSARSEMDTVAQHSGSDLERQSMEMHLLEEQLAGLQTEGRSKEQQIQALQADLDKAQHS
LSQQEGQARMLSAQLEEGEITSSELEQKLQDMEASLLEISQARDMAKAVLCERDTEINEL
QLRITQKEQEMMELSNGMSAKLLQTGEEKFLMSAEVKKLKEQIIELEKAGEKEKAKGESH
VEDSDELTSLRKDKEDLTTQVATIKKRLQAALVQRKELMKKVAAFEKEADQRKGQVGKAT
EEAPASVPALEKDRKQEDMAIETTLEEFRQALRSKEEVMEVLEQKISQQDQVLEETLEMN
RRLSEGAQHTPEADTSSEITGLQSQVASLESDCETLQKKLQEAQDSRKDTIRMAKEKDRH
HREQLKQQKEEYNGLLERLEEQVGERDGLLTRLRELEELQAQKEESTEKEVHAELETNAA
VEKIEKPAAGDWVQEDWVDFAAPENEAQQRGDKPIPSAEEPSQVLSADIEASFQALKEEV
QAEKASCTELEGQLQESQASLSLRESELLELGKELQALREKESHIEHVYEELEALREKCL
QAQTYAEAVKAELEAAAKGAASDSAESTIAILQTEVEDFKQFLSNKNDEIMELSQQLGEQ
SSLLQSMQETVYEKDQSIASLQEGLRAEKEKSQRLEAEIPQRQEEEKGSEAKILQLQQKL
KAALISRKEALKENKSQKEELASTEKVITELQQRMDAREVELEKLRAERERLIEEVDRTL
VENQSLGGSCESLKLAMEGMLTEKDFCKREAESAKEEAARTCRECEEKVHGMKDEYETLL
KSYENVSDEAERVRRVLEAARQERKELVARARTHEAAKQEAERQKEEAQKEVDTVKDKMR
KFAKTKQQKIMDLEEENERLREMDEKKGIRREDKALKGELERLKEEFEALKADLNATTAQ
RDSLEQQVVEVREQLAQELEKGDRLARDKTPSSDDVVEETVVAQQSSTVMTETTQEPVKS
QPQDIEPHSQAIESEVAAPEMHSFEETGKNEITESTQALIDVKLSKMEAALQSERELRQE
REAELTAELASLEQRLQESKEKEQTQGEEPVKTDMSESELATIEGKRREMEAALHSEREQ
WQKSEAELKAGLASLEQLLQESKDKEQSLMEESSKREAQLQELHSSLEVEKDDLEERLMN
QLAQLNGSIAGYQQDAADSRERLAELQREVERLERERAELEALAESERDRAARLEEDKRQ
AQRERAEAEAESGKQRELEQQLKSAQRVKEGSQSRAKQLEELLREKQLEVRQMQKDCIQY
QERISEMAREGKALQLGSNEIHKELGQAYLERTKVTDALKKTEAELSNCKAQLVEAQTEA
SQAQAERRACEQTALQREAELKAEAEQSLDSVRFRLGAELKQIELRLEESYREREREENA
TREAKELADTAERQAQQMQARLDESLARLAAFSRCMSSLQDDRDRVLDETRQWESRFNST
LQGKEAEVREGETRSRDLAEQLQKETAQREELQLTVDRLQKADEQWQLKWEQEEKRLREN
QAALEQERGELQKSLAQTETSLADTRAHLASLESEAEGLRHRAQALEEAVGKLQGETNEA
RSQLKEREAEGRRLGLSVEQLETDLRSSKTLTESLQTELSEKERREVELLGEKEQAVTQA
AEEARREADARAQEAEKELEERREEVRGLEDRLRKAEEESSHSKARLDAFTKAMGSLQDD
RDRVLGMYKQLEEKHLQVMMEKDALIQEAAAENNSLKEELRSLLVQRDDLHAEKAKLSAQ
LHGYRDDLTQVLTMKESQHKQLLSGQLERIATLEKERAELEAKIKSLEGGEAFVQAVERE
TLSQAGDSGNRQVRDAPGAEVEKLREQLQAARAQVESLEESLAKEREVQEARQKELKELR
WEGGVTRTESETAAERVAELARDLLSMEQRLLEEREVAGQLRAQNQAFGQAMASLQGSRD
QALSQAQELSLRLEEMSRAGGQQTPTTGHGGSTAEVWGLKNSLSALQNDRERLLEQLQRQ
HSELTRLGGGELSRLSQELEEEKRRSDEMVDRMRELDNLRQRENQELEILRLEQVDWQAQ
AELLKQQTLATLSDRDQQVRQLGAMLEEARATRPKPPEEHHQRQAPLEADLSSKVEVLQS
ESGPLNDLQLREQRITQLSNKVESAEPVAVPPSPQLSQVFEENRHLSSQFQGSSQRLDEA
ESRCTALQRQLQELHEDKRNRTGEVDSAPGAPQQHSGPSESESLRVDFEELQRRLDEEQQ
YRVAVEEQLMAAQDRLKLINQGEWQSAHEGQFSASETAVLIEPPGGSVTRIRSSNGPGLM
RMLRVSFCSRQRTPLLVSLYLLTVHVLLLLCLGGYV
NT seq
9291 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccggctgtcccagggctttaccaacgtcctgcaggagctgtctggggacgag
ccccccgatggagcccctcaggatatgttggtcccccagctcccccctggagatgccccc
ggggcccctgaggagtctgggcctggggtggaggaggagcccctggagaggctggctcat
ctggagcagctgactgtgcatctcaaggaggtggtcagagataaggacagccagctggcc
acattcgaaacgcagctcaagagtgaaagggagacagcggaggcacgcttcactaaactg
aagctgcaggccaaaaccaagatggctactctgaacaaacaaattgctgacctcaagggg
caggagggagcaacaagctctccagacagctccttcaccagctcagctcctgctgtggag
gaggaactccaggagctgaggaagcagctcagtgaggtctcgacctcggcgaagaacctc
gaggagcgtctccagatgtccgaacaggccctgtgtgaaaaggaagccgtacacacggag
caggttcgtgtgcttcaggcagttgtctgtgaaaaggacgtgcgtttccaggagcagatc
cagaagcatgaggacgagctgctgagggtcacagtgcagagccagaacgacgctgagctg
cagcaggtacagcaggctctacgtgcagcccagcggcgttgtgaggagcaggaggaagcc
atgcggtcgcgctgccaggtgctggagatgctgcagggggagctgaacaatgccgaccag
cagaaacagatcctcacggctcagttccgccagatggagcaggagctggctgaggctggt
aggcagagggagcaggagctggctgaggctggcaggcagagggaggaggagaggcagcag
tgggctgggtggtccagccaggccgaggcagagctggtggccctccgagccaacctggag
gcctccgagcaggacagagcagcccagctagccaacctggaggcctccgagcatgacaga
gctgctcagctagccagtctggaggcttcagagagagacagatcaacccagatggaggag
ctgacagtgaaactggagtgtgccactagagagcgggaggaagtgaccaacagagaagta
gccaggttggagaaggagcttgctgccttaagagaggagtatggagaggggcaaagggca
ggagaggccctggctgagttgttgacaggcctgcgctctctggctggagagggggtcaag
gaggacagccctgttcccaccgacccggcccagtgcctgggtacactgcaggccctggag
gcccggctggagaggctgagggtggagcagagggagagcgaggaacgctgcgcccaggtc
acccacaccatggagacattgcaagaacaactggataagcgcaccgcagaaggcgaagag
gcagttgctaggatacaacagctggagcagcaaattggaatggctgctagggagtcattg
gtccagtgtgtgactgacccgtctgtggaagaagtgactgatgctgaaaaagcccaaata
ttggctctggagcagcagctattggagaaagaccatgaattggctgccctgcgagagagt
cttgtgctggctgaagagcagggctcaaatgatgcattcaaggtaagcgctgatcagatt
ctagaccagagtgaggacactgccatggccccctgcgacagtcctacagtgctgccagac
ctcctagaagacacgcgagaggaggacaccaccctggtggcagaggataggtcaatcctg
tcagtctccgctgataacgagagcagtccagagttcattgaaccccagtctgactctccc
ggagaatctaagggggcctcctctgatgagatggtcacgagcagtgactccgaggtggcc
cacagcagctggaccctcctagaggctgtgaaccaagatgaaggtcagcagtcgcctccc
atactgcagggctttagccagctccagatgcaatcctgggaagagaacagctctgagcag
gaaacatccacagtccaggtggagtcctcatcagtcatcatccgtgagactgtgcaggtg
cacctcagccagcagggggcgaccctctttgactctgactctgcccctggacaggtgttt
gcccaggccctagcagatgagctgcagaacaggtacagtgagctcatggttgagctccag
agactgagagaggctgcctcagagtcacaggagagaacccaaggccttgaggaagagatt
cggtccctgacagttgccaaggatgaggcagaatcccaggcccagagatatgaggaagag
ctccagtcagccaggtcagagatggacacggtggcccagcacagtggctctgacttggag
aggcagagcatggagatgcatctcctggaggagcagctggccggcctgcagacagaaggc
cgctccaaagagcagcagatccaggccctgcaggcagacctggacaaggctcagcactct
ctctctcagcaggagggccaggccaggatgctgagtgcccagctggaagaaggggagatc
acctcctctgagctggagcagaagctccaagacatggaggccagcctactggagatctcc
caggctagggacatggccaaagctgtactgtgtgagagggacacagagattaacgagctg
caactgcgcatcacccagaaagagcaggagatgatggagctgagcaatggcatgtctgcc
aaactgctccagaccggtgaggagaagttcctgatgagtgctgaagtcaagaaactgaag
gagcagataattgagcttgagaaagctggagaaaaagagaaagcgaaaggggagagtcat
gtagaggatagtgatgagctcactagtttgcgaaaggacaaagaggatctgacaacccaa
gtggccaccattaaaaagaggttgcaggcagccctggtgcagcgcaaagagctgatgaaa
aaagttgcggcgtttgagaaagaggcagatcaaaggaaaggacaagtagggaaagcaaca
gaggaagcccctgcaagtgtaccagctttagaaaaagacagaaaacaagaggatatggca
attgagactactctcgaagagttcagacaagccttgaggtccaaagaagaggtcatggag
gttttggaacagaaaatcagccagcaggatcaggttctggaagaaacacttgaaatgaac
agaaggctgagtgagggagctcagcacactccagaggctgacacctcatctgaaatcact
gggttgcagtcccaggtggcctcactggagtcagattgcgaaacactgcaaaagaaactc
caggaggcccaggactctcgcaaagacaccattcgcatggccaaagaaaaggacaggcac
caccgcgaacagcttaaacagcaaaaggaagagtacaacgggctgttggagcgtttggag
gagcaggttggtgaacgagatgggctgttgactagactgagagagctcgaggaactgcag
gcacagaaagaggagagcacagagaaggaagtccatgccgagctggagaccaacgctgca
gtggaaaagattgagaagccagctgcaggagattgggtccaggaagactgggtggacttt
gccgctcctgagaacgaagcacaacaacgaggtgataaacccattcccagtgctgaggaa
ccctctcaggtactttcagctgacattgaggcctcatttcaagctctgaaagaagaggtc
caggctgagaaggcatcttgtacagagttggagggccaactgcaggaaagccaggctagc
ctgtcactcagggaaagtgagcttctagagctgggcaaagagctgcaggccctgagagag
aaggagagccatattgaacatgtctatgaggagttggaggctctgagggagaagtgtctc
caggctcagacctatgcagaagctgtgaaagcagagttggaggctgcggccaaaggagcc
gcctcagactccgctgagtccaccattgccatcctgcagacagaggtggaggacttcaag
cagttcctgagcaacaagaacgatgagatcatggagcttagccagcagctgggtgagcaa
agctccctcctccagtctatgcaagagacagtgtatgagaaggaccagtcgatcgcctcc
ctgcaggaaggcctgagagcagagaaggaaaagagccagagactggaggccgagatcccc
cagaggcaggaggaagagaagggcagcgaggccaagatcctgcagcttcagcagaagctc
aaggccgcccttatctcccgcaaagaggccctcaaagagaacaaaagccagaaagaggag
ttggcctccactgagaaagtcatcactgaactgcagcagaggatggatgctagagaagtc
gagctggagaagctgagagcagaaagagagaggctgatagaggaggtcgatcggaccttg
gtggagaaccagagccttgggggatcctgcgagagcctcaagctggccatggagggtatg
ctgacagagaaagacttctgtaaaagagaggccgagtctgccaaggaggaggctgcccgg
acatgcagagaatgtgaggagaaggtgcatgggatgaaggatgagtatgagactctgcta
aagtcctatgagaacgtgagtgatgaggcagagcgtgtgagacgggtgctggaagctgct
aggcaggagaggaaggagcttgttgctagagccaggacccacgaggcagccaagcaggag
gctgaacggcagaaagaagaggcccagaaagaggtggacactgtcaaagacaagatgagg
aagtttgccaagaccaagcagcagaaaataatggatttagaggaggagaatgagagactc
cgagagatggatgaaaagaaaggaataagaagggaggacaaggcactcaaaggagaactt
gaaagactcaaagaagagtttgaggctctgaaagctgatttgaatgccactacggcacag
agggactccttagaacagcaagttgttgaggtgagggaacaactagcccaagagctagag
aaaggggacagattagctcgagataaaacccccagctctgatgatgtagtggaggaaact
gttgttgcccagcagtctagtacagtcatgactgaaactacccaagagccagttaagagc
cagcctcaggacatagagccacatagtcaggctatagagtctgaggtagctgcacctgaa
atgcactcttttgaggagacggggaagaacgaaataactgaaagtacacaggccctaatt
gatgtgaaattgagcaaaatggaggcagccctacagtcagagagggaactgaggcaagag
cgtgaggctgaactcactgctgagctggcctctctggagcagcgccttcaggagagtaaa
gaaaaggaacagacccagggggaggagccagtgaagacggacatgtctgaaagtgaactg
gccacaattgagggaaagcggagggaaatggaggcagccctacattcagagagggaacag
tggcaaaagagtgaggctgaactcaaggctggactagcctctctggagcagctccttcag
gagagtaaagataaggaacagagcctgatggaggagagctctaaaagggaagcccaactc
caggagctccacagcagcctggaggtagagaaggacgacctagaggagcgtctgatgaac
cagctggcccagctgaatggcagcatcgccggctaccagcaggacgcggcagacagccgg
gagcgccttgcggagctgcagcgggaggtggagagactggagagggagcgggccgaactg
gaagccctggccgagagcgagagggaccgggcagccaggctggaggaggacaagaggcag
gcccagagagagagggccgaggcagaggcagagtcagggaagcagagggagctggagcag
cagctgaagtccgcccagagggtgaaagagggcagccagagtcgggcaaagcagctggag
gagctactgagagagaagcagctggaggtgcgccagatgcagaaggactgcatccagtac
caggaaaggatcagcgagatggccagggagggcaaggctttgcaactgggcagcaacgag
atccacaaagagcttgggcaagcctatctggagaggaccaaagtcacagacgctttgaag
aagactgaggctgagctatctaactgcaaagcccagctggttgaggcccagacagaggcc
agccaggcccaagctgaaaggagagcctgtgagcagaccgctctacagagagaggctgag
ttgaaagcagaggcagagcagagcctggactctgtgaggttcaggctgggagccgagctg
aagcagattgagctgaggttggaggagtcttaccgggagagggagagagaggagaatgcc
acccgggaggcaaaagagctggctgacaccgctgagagacaggcccagcagatgcaggcc
cgcctggatgagtctctggcccgactggctgccttctcgcgctgtatgtcctccctgcag
gacgacagggaccgcgtgctggatgagacccggcagtgggagagtcgcttcaacagcacc
ctccaggggaaggaggccgaggtgcgggagggagagacccgctccagagatctggctgaa
cagctgcagaaagagaccgcacagagagaagagctacagcttacagtggacagactgcag
aaagcagacgagcagtggcagctgaaatgggagcaggaagagaagaggctccgtgagaac
caggctgccctggagcaggagaggggggagcttcagaagtccctagcccagactgagacc
tccctggctgacactcgcgcccatctggcttccctggagagcgaggcggaggggctccgc
cacagagcccaggccctggaagaggcagttgggaagctgcagggagagaccaacgaggcc
aggtcccagctgaaggagagggaagcagaggggagaaggctgggcctgagcgtggaacaa
ctggagacagacctgcgctcctccaagaccctgacagagagcctgcagacagagctgagt
gagaaggagaggagagaggtagagctgctgggggagaaggagcaggccgtgacacaggct
gcagaggaggccaggagggaggctgacgccagggcccaggaggctgagaaggagctggag
gagaggagagaggaggtgcggggtctggaggaccggctgcggaaggcagaggaggagagc
agccacagcaaagccaggctggacgccttcaccaaggccatgggctctttacaggacgac
agagacagagtacttggcatgtacaaacagctggaggagaaacatctgcaggtgatgatg
gaaaaggacgctctgatccaggaggctgctgcggagaataacagtctgaaggaggagctg
cgctccctattggtccagagggacgacctccatgcagagaaggccaagctatctgcccag
cttcacggctacagggacgaccttacccaggtcctcaccatgaaggagtcccagcacaag
cagctcttgtccggccagctggagcgcatcgctaccctggagaaggagagagctgagcta
gaggctaagatcaagagcctggagggaggggaggcttttgttcaggcggtggagagggag
acactcagccaggctggtgatagtggaaacaggcaggtgagagacgctcccggggcggag
gtagagaagctgagggagcagctgcaggctgccagggcccaggtggagagcctggaggag
agccttgccaaggaaagagaggtgcaggaggctcggcagaaggagctgaaagaactgcgt
tgggagggaggggtgacgcgcacggagtcggagacagcggcagagagggtggctgagctg
gcccgagacctgctgagcatggagcagaggctgctggaggagagggaggtggccggccag
ctccgggcccagaaccaggcattcggccaggccatggcgtcactgcagggcagcagggac
caggcactcagccaggcccaggagctcagcctcagactggaggagatgagcagggcaggg
ggccagcagacacccaccacgggccatggaggatccactgcggaggtgtggggactgaag
aactccctgtcagccctgcagaacgacagggagagactgttggaacagctccagcggcag
cactcagagctcactcgactgggaggaggagagctgtctagactcagccaggagctagag
gaggagaagaggaggtctgatgagatggtggacaggatgagggagctagacaacctgagg
cagagggagaaccaggaactagaaattctcaggctggagcaggttgactggcaggcccag
gcagagctcctgaagcagcagaccctggccaccctctcagaccgtgaccagcaggtgcgc
cagctcggtgccatgttggaggaggcccgcgccaccaggcccaaaccaccggaggaacac
caccagagacaggcacctcttgaggcagacctgtcatctaaagtagaggtccttcaatca
gagagtggcccgctgaatgatcttcagctgcgagagcagcggattacacagctcagtaac
aaggtagagtctgctgagcccgttgctgtccctccctcccctcagctctcgcaggtgttt
gaggagaaccgccatctctcctcccagttccaaggcagttcccagaggctggatgaggcc
gagagccgctgcactgccctccagaggcagctccaggaactgcacgaagacaagcgcaac
aggacaggggaagtggacagtgcccccggagctcctcagcagcacagtggcccttcagag
agcgagagcctcagggtggattttgaagagctccagcgcagactggatgaggagcagcag
tatagggtggctgtggaggagcagctaatggccgcccaggaccgcctcaaactgatcaac
caaggtgaatggcagtcggcccatgaagggcagttctctgcttctgagacagctgtcctc
attgagccaccaggaggctctgtcacccgaattcggagcagcaacggaccaggcctgatg
agaatgctgcgcgtgtccttctgctctcgccagcgcacacccctgctggtgtccctctac
ctgctcaccgtgcacgtgctgctactgctctgcctggggggttacgtttag
DBGET
integrated database retrieval system
