Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139378561
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Entry
139378561 CDS
T10872
Name
(RefSeq) myosin-binding protein C, slow-type-like isoform X1
KO
K12557
myosin-binding protein C, slow-type
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139378561
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139378561
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
139378561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
THB
Ig_DSCAM-DSCAML_C
Ig_CYK3_C
PHD_4
Motif
Other DBs
NCBI-GeneID:
139378561
NCBI-ProteinID:
XP_070976938
LinkDB
All DBs
Position
21:complement(12602545..12640403)
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AA seq
1390 aa
AA seq
DB search
MPEPTKKDETPNGEKESVATDSSEAPMPTPEISLEVSPPPPEQPVETEGKDPQPIEVIKP
VQPEPVENGSKEPEPEAVVVRAKEQVESVNSEVKEEAQSPCSPPLPATVKEEAEPVVTEV
NQPPEPVVTVVTPPPPPPPERVVTDVTQPPEPVVTVVTPPPHPEPVVTEVTQLPEPVVTV
VTPPPQPVVTEVTQPPEPVVTLVTPPPPPPPPEPVVTVQVTPPPPPADKDDDATTNTPSP
PPPPEDANTAKKLSIELPNDSVHVSAMGRKDSVWSLGEGQAPEDLDKPVDTPPLSSLLIE
RPQGGSITVGGDISFVAKVEAQDLLRKPTIKWFKGKWMDLASKTGKHLQLKETFDRRTKI
HTFEMHIIKAKDNYAGNYRCEVTYKDKFDSCSFDLEVKELEQSQSVDIRSAFKRSSEGHE
DAGDLDFSGLLKHREPKQDETPEVDVWEILKSARPDQYEKIAFEYGITDLRGLLKRLKKT
KKEEKKSEAFAKKLDPAYQADKGGKIRLMVDLADPTVELKWYKNGQEIRPTPKFIFEQKG
TQRILVINNCGLNDDAAYSVAAGEEKCTTELFVKELPVKITKEIEAVKTTVNERIELECE
VSEEGAQVKWCKNGVEVPTGPRSRYRVKSEGLKHWLIIDDASKEDTGTFSLMASGGTSEA
KVQVELKPLKIIQDLQDMTVLLGQPLKMHCEIFPGNVPGRWYRNGQLIQSNDRINILQRA
KNHRLEIVNSTIHDAGDYTFVPEGYSQSLCAKIHIVDPPRVHLESLNFPDNTVTIVAGNK
LRVEIPISGEPAPRVVWMKGERVILDSGHRVRAETFSDHTSLTIDIAEKEDTGNYKIVLQ
NEAGEAGASVKVKVVDIPDPPEVPLVTEVGGDWCSMTWEPPIYDGGSPILGYFIERKKKQ
SSRWMRLNFDLNKETTFEPKKMIEGVPYEVRVFAVNAIGVSKPSEPSKAFVPLAVTSEPT
MLVVDDVTDTTVTMKWRPPDTIGAAGLDGYLVEYCIEGTDDWRVTNKELTEKTKYTITGL
PPEAKILVRVRAINAAGASTPRTLQHSILVKEVIEPPKIRIPRHLKQTYTRKVGEAVNLV
IPFMGKPRPKVSWLKEGETVDPTQVTIRNTDCDSIIFIRKAERKHSGKYDMKVEVENHVD
TAIVDIQIVDLPGPPQCVKIDEVWGGNVALDWTPPKDNGNAAITGYTIQKADKKTMEWYT
CIEHYHRTCITITELVVGNEYYFRIYSENMVGLSEGATQTKDSALIVKEGMQLKNPEYID
HDFKEPPKFTQPLINTFAIAGYNATLNCSVRANPRPKVIWMKNKIAIIDDPRYRMFSNQG
VCTLEIRKPSPYDGGMYSCKAINDLGDALVECKLEVKGGFTFSELMQRGVPLHLIDKYMS
ETKAVEQPEK
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgccagagcccacaaaaaaagatgagacacccaatggtgaaaaagagagtgttgccaca
gacagtagtgaggcgccaatgcccacacctgagatatccctcgaggtctcacctccaccc
ccagaacaaccggtagagactgaggggaaggatccacagcccatagaggtgattaagcct
gtacagccagaaccagtagagaatgggtctaaagaaccagaaccagaggcggttgtggtc
agggctaaagagcaagtcgagtctgtgaactctgaagtaaaggaggaggcccagtcccct
tgctcacccccactgcctgcaaccgtgaaggaggaagcagagccagttgttacggaggtt
aaccaaccgccagagcctgttgttacagtggttaccccaccaccacccccacctccagaa
cgagttgttacagatgttacccaaccgccagagcctgttgttacagtggttaccccacca
ccacatccagaaccagttgttacggaggttacccaactgccagagcctgttgttacagtg
gttaccccaccaccacaaccagttgttacggaggttacccaaccaccagagcctgttgtt
acattggttaccccaccaccaccacccccacctccagaaccagttgttacggtgcaggtt
accccacccccacctccagcagataaagatgatgacgctacaaccaacaccccatcacca
ccgcccccaccagaggatgccaatacagccaagaaactgtctattgagctgcctaatgat
agcgtccatgtgtcagccatggggagaaaagactcagtgtggtctctgggagagggacag
gctccagaggaccttgacaagcccgtagacaccccaccgctgtccagcctgctcatagaa
agaccccagggcggatccatcactgtgggtggagacatctcctttgttgccaaggtggag
gcccaagacctgctccgtaaacccaccatcaagtggttcaaagggaaatggatggacctg
gccagcaagaccggaaagcacttgcaactgaaagaaacctttgaccgacgcaccaagatt
cacacatttgagatgcatatcatcaaggccaaagacaactatgctggaaactacaggtgt
gaggtcacctacaaggacaaatttgacagctgctcttttgacctggaagtgaaagaactg
gaacagtcacagagtgttgatattcgatcagctttcaaaagaagcagtgaaggacacgag
gatgcaggggatcttgactttagtggtcttcttaaacatagggagcccaagcaggatgag
acccccgaagtggacgtgtgggagatcctgaagtcggccaggccagaccagtacgagaag
atcgcctttgagtacggcataacagacctgcggggtctgctcaagaggttgaagaagacc
aagaaagaggagaagaagagtgaagcttttgccaagaagttggatccagcataccaggct
gacaaaggagggaagatccgcttaatggtggatcttgcagaccccacagtagagctgaaa
tggtacaagaacggccaggagatccgtccaactccaaagtttatctttgagcaaaagggc
acgcagcggatcctggtcatcaacaattgcggcctgaatgatgatgctgcttattccgta
gctgcgggagaagagaagtgcaccacagagctgtttgtcaaagagttaccagtgaagatt
actaaagagattgaggcggtgaaaacgacagtgaacgagaggattgagttggagtgtgaa
gtgtctgaagaaggagctcaagtaaaatggtgtaagaatggcgtggaggtaccgaccggg
ccccggtcacgctaccgtgtcaagtctgaggggctgaaacactggctaatcattgacgat
gcctcaaaggaggacactggaaccttctccctaatggcctctgggggcacctctgaagcc
aaagtccaggttgaattgaagccactgaagattattcaggatttgcaggacatgacagtg
cttttgggccagccgctgaagatgcactgtgagatcttccctgggaatgttccaggtcgc
tggtacaggaacggacagttgatccagtccaacgaccgcatcaacatcctgcaaagagcc
aagaaccaccgattagaaattgtgaacagcaccattcacgatgccggggattataccttt
gtgccagagggatactctcagagcctctgtgccaaaattcatatcgttgatcctcccagg
gtgcacctggagagcttgaacttccctgacaacacagtgaccattgtggcaggaaataaa
ctccgtgtggagatccccatcagtggagaaccagcacccagagtggtgtggatgaaggga
gagagggtaatccttgactcgggccaccgtgtgcgagctgaaaccttctcggaccacacc
agtcttaccatcgacatcgcagagaaggaagacacaggaaactacaagatagtcctgcag
aatgaggctggggaagcaggggctagtgtcaaagtcaaggtggtggatatcccagaccct
cctgaagttcccctggtcacggaggtgggaggagactggtgctctatgacatgggaaccc
ccgatctatgacggaggctcacccatcttaggctacttcatcgaaaggaagaagaagcag
agttccagatggatgaggctgaactttgacctgaacaaagagaccacatttgagcctaaa
aagatgattgagggtgtcccatacgaggtgcgcgtctttgctgtgaatgccatcggtgtg
tccaaacccagcgagccatccaaagcctttgtgcccctggctgtgaccagcgagcccacc
atgctggtggtggatgatgtcacagacaccacggtgaccatgaagtggcgtcccccagac
accattggagctgcaggcttagacggctacctggtggagtattgcatcgaaggaactgat
gactggagagtaaccaataaggagctgacagagaagactaagtataccatcactggcctc
cctccagaggctaagattctggtaagggtaagggccatcaatgctgccggcgccagcact
cccagaacacttcagcactctatcctggtcaaagaggtcatcgaaccacctaagatccgc
atccctcgtcacttgaagcagacgtacactcgtaaagtcggagaagccgtcaatctcgtt
attccattcatgggaaagcccaggccaaaggtgagctggctgaaggagggtgagacggtg
gaccccacgcaggtcactatccgcaacacagactgtgacagcatcatcttcatccgcaaa
gcagagaggaagcactctgggaagtacgatatgaaggtggaggtggagaaccacgtggac
acggccatcgtagacatccagatagtagacctcccagggcctccacagtgtgtgaagata
gatgaggtctgggggggaaacgtggctctggactggacccctccaaaggacaatggcaac
gccgccattacaggctacaccatccagaaagcagacaagaagaccatggagtggtacacg
tgtattgagcactaccaccgcacctgcatcaccatcaccgagctggtggtggggaacgag
tactacttcagaatctactctgagaacatggtgggtctgagcgagggtgccacccagacc
aaggacagcgccctcattgttaaagaaggcatgcaactgaagaacccagagtacatcgac
cacgacttcaaagagcctcccaagttcacccagcccctcatcaacacctttgccatcgct
ggttacaatgccaccctcaactgcagcgtccgtgccaacccacggcccaaagtgatttgg
atgaagaataagatagccatcattgacgacccgcgctaccgcatgtttagcaaccaaggg
gtctgcaccctggagatccggaaacccagtccctacgacgggggcatgtactcctgcaag
gccattaatgacctgggtgatgcactagtggagtgtaagctggaggttaaagggggcttt
accttctctgagctcatgcagcgtggagtgcctttacacctgatcgataagtacatgagc
gagaccaaggccgtggagcagccagagaagtag
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