Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139378616
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Entry
139378616 CDS
T10872
Name
(RefSeq) USP6 N-terminal-like protein
KO
K20133
USP6 N-terminal-like protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139378616
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
139378616
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
139378616
NCBI-ProteinID:
XP_070977038
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All DBs
Position
21:complement(13920544..13965035)
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AA seq
919 aa
AA seq
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MSMQVLHMVRELVSPSRRRAAARYGASGTEQDAVLRLEQERAEIVSKYDKGKEGATVEPW
EDASFHLYKVIDRFGFVHENELPSYDSVEEKQKHLEVERTSKWLKMMKSWDKYKNSEKLV
RRIYKGIPLQLRGEVWCLLLDVPKIKEEKKDFYEKLKLRARGLSPDVRQIDLDVNRTYRD
HVMFMTRYDVKQQALFHVLTAYSVYNTEVGYCQGMSQITALLLIYMNEEDAFWALVKLLS
GQKHAMHGFFIPGFPKLMRFQEHHDRILKKMMPKLKSHLDTQEVFTSLYTMKWFFQCFLD
RTPFTLTLRIWDIYILEGERVLTAMSYTVLKLHKKHLLKLSMEDLVEFLQVTLAKDFFFE
DDFVIEQLQNNMVELRRSKLELAAPGKEDEYPKKLLGQLPPEPAVNQNHVANGQSHAQPA
EPPKAPSPSPERQRDSRPPSRARRDSLEKLVRQHKAEKREARSRGSGENSVHLDPHCKQP
SAPTLSTPERGFTPTPSPAPSPSPHPNPPTKVVDRGKPQNHATANHNSNAASSSSRKDIA
PRWVKPSETKLEAAKAAAAREIQPSSSPDDTLLLNRRPRSRGLIPGSNRGSNASQYDNVP
GGAEQDFVEVLELDRPPSQMRRSETPSLPPTHTPSLQGSMVSIGPVGRQAKHPIPTALSL
NSPVGGKSYVHPNGQSQYHTPPQQYSPGRPAMVPLHYPPYSVSLEQRGLGEDRHYGPPPS
RGTPPMGLMYGERAYVTTQRPSHSPEKALMNNSYATTHRQPPSSAQPPRTIQQLDSPGSN
ASTYLCQPTRLTSTAAAYPVYPPVDYNRYEGRRRGEQTPPYLPEGPGRGGAAEVQPWRQQ
EGGDMSRVPGGVPRSPSFQRAQMSPVQEFTFPDGLAHYRTQFHEQQQQPTMRQQLPPLFG
GPHYRHAPEAFTMQESMLL
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgcaggtgcttcatatggtcagggagctggtgtctccctcccgacgcagagca
gccgccagatacggagcgtctggtacagagcaggatgctgtgctgaggcttgagcaggag
agggctgagatcgtctccaaatatgacaagggaaaagagggcgccactgtggaaccctgg
gaggatgcaagcttccacctgtacaaagttattgaccgcttcggcttcgtacatgagaat
gaacttccgtcctacgactcggtggaagagaagcaaaaacacttagaggtagaaaggacc
tcaaaatggttgaagatgatgaagagctgggacaagtataaaaacagtgagaagctggtg
aggcggatctataagggaattcccctacagctccgaggagaggtgtggtgtctgctcctc
gacgttcccaaaataaaggaggagaagaaagacttctacgagaagttgaagctcagggct
cgaggtctgtctcctgacgtccgtcagattgacctggatgtgaacagaacctacagggac
cacgtcatgttcatgacccgctacgacgtcaagcagcaggctctgttccacgtactaaca
gcctactccgtgtacaacacggaggtggggtactgccagggcatgagtcagatcactgct
ctgttgctcatctatatgaacgaagaggatgccttctgggctctggtcaaactgctgtct
ggacagaaacacgccatgcatgggttttttatccccggcttccccaagctgatgcgcttc
caggagcaccatgaccgcatcctcaagaagatgatgcccaaactgaagtcacacctggac
acacaggaggtgttcaccagcctgtacactatgaagtggttcttccagtgtttcctggac
aggacccccttcaccctgaccctgcggatctgggacatctatatcctggagggagagaga
gttctgaccgccatgtcctacacggtcctcaaactgcacaagaagcacctgttgaagctg
tctatggaggatctggttgagtttctgcaggtgactctggccaaggacttcttctttgag
gatgactttgtgattgagcagctgcagaacaacatggtggagctaaggaggtccaaactg
gagctggccgcaccaggtaaagaggacgagtatcccaagaagcttcttgggcagcttccc
ccagagccggcggtgaaccagaaccacgtggcgaatggtcagagccacgcccagccggcc
gagcccccaaaagcgcctagcccctcccccgagcgccagcgggacagccgaccccccagc
cgggcgcgcagggactccttggagaagctggtccggcagcacaaggctgagaagagggag
gccagatcacgggggtctggagagaactccgtccacctagacccccactgcaaacagccc
tccgcccccaccctttctaccccagagagaggattcacacctacaccgtccccggcgccc
tctccctcgccacaccccaaccctcctacaaaagtggtggacagagggaagcctcagaac
cacgccacggccaaccacaactccaatgccgcctccagcagctcccgtaaagacatcgcc
ccgcgctgggtcaagccctccgagaccaagctggaagcggccaaggcagcggcggccagg
gagatccagccctcctccagccctgatgacaccctgctgctcaaccgccggccccgctcc
aggggcttgatcccaggctccaaccgcggctccaacgcctctcagtacgacaatgtgccc
gggggggcagagcaggactttgtggaggtcctggagctggacaggccaccgtcgcagatg
aggcgcagcgagacaccgtccctaccccccacccacacccccagcctgcaagggagcatg
gtctccataggaccagtgggtaggcaggccaaacaccccatccccactgccctgtccctc
aacagccctgtggggggtaaatcctatgtccaccccaacggccagagccagtaccacacg
cccccccagcagtactcccccggccggcctgctatggtgccactccactaccctccgtac
agtgtgagccttgagcagaggggactgggagaagacaggcactatggccccccaccctcc
cgaggcaccccacctatgggtctgatgtatggggagagggcgtacgtcaccacccagcgg
cccagccactctcctgagaaggccctcatgaacaactcctatgccaccacccacaggcag
cctcccagctcagcccagcccccccgcaccatacagcagctggacagccctggtagtaac
gcctccacatacctgtgtcagcccacacggctcacctccactgcagccgcctatccggtg
taccctcctgttgactataacaggtacgaggggcgcaggagaggggagcagaccccgccc
tacctgcccgaggggccaggccggggaggggcagcggaggtgcagccgtggaggcagcag
gaaggtggtgacatgtcacgtgtccctggaggtgtaccccgctcccccagcttccagagg
gcccagatgtcccccgtgcaggagttcaccttccctgacggcctggctcactacaggaca
cagttccacgagcagcagcaacagcccaccatgaggcagcagctccccccgctgttcgga
ggaccacactacaggcatgcaccagaggcattcaccatgcaggagtctatgttactgtga
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