KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139378628
Entry
139378628         CDS       T10872                                 
Name
(RefSeq) splicing factor 45-like isoform X1
  KO
K12840  splicing factor 45
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    139378628
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ocla03041]
    139378628
Spliceosome [BR:ocla03041]
 Complex A
  U2 snRNP components
   U2 related factors
    139378628
 Complex B
    139378628
SSDB
Motif
Pfam: G-patch RRM_1
Other DBs
NCBI-GeneID: 139378628
NCBI-ProteinID: XP_070977065
LinkDB
Position
21:complement(15124992..15139368)
AA seq 430 aa
MSLYDDMGVGSATSDTKTEGWSKNFKLLQSQLKVKKAALTQAKSQRMKQGTVLAPVIDLK
RGGSADDRQIIDTPPHIAAGLKDTAPSGFSSGDALIPLADEYDPMFPNDYEKVVKRHREE
RQRQREQERLKEIEEREKKRKDRHEGSSAPSGFSRFPAAEGESDEEEEDYEKEKRKRSMG
GAAIAPPSSLVDSRDSSSYSYEDEMRPSRGSKAAIPPPMYEDSDRPRSPPGGPTNSFLAN
MGGTVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIIGDATEKTPGSSNQT
AAAEPLGWGSASIVDPSKKSEANPLTEILKCPTKVVLLRNMVGRGEVDEDLEGETKEECE
KYGKVIKCVIFEIAQVTDDEAVRIFLEFERVESAIKAVVDLNGRFFGGRVVKACFYNQDK
FRVLDLGEQM
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgtcgctttacgacgacatgggcgtcgggagtgcgaccagtgacaccaagaccgagggc
tggtccaagaattttaagctactgcaatcacagctgaaagtaaaaaaagcagctctgact
caggctaagagtcagcggatgaagcagggtactgtcctggctccagtcatcgacttaaag
agaggaggttccgctgatgacagacagataatagacacacccccacacattgcagcagga
ctcaaggatacagcacccagcgggttctcctcgggggacgcgctaatccccctggctgat
gagtatgaccccatgttccccaacgactacgagaaggtggtgaagagacaccgcgaggag
aggcagaggcagagagagcaggaacgactgaaggagatagaggaaagagagaaaaagagg
aaggaccgacacgagggcagcagcgctccgagcggattctcccgcttccccgcggcagag
ggagagtcagatgaggaggaggaggactatgagaaggagaagagaaaaaggagtatgggt
ggagcagccatcgccccaccctcatcgctcgtggatagtagagacagctcgtcatactcc
tatgaggatgagatgcgaccctcccgtggttctaaagcagccatccctccccccatgtac
gaggactcagaccgcccccgctcgccacctggcggtcccacaaactcgttcctggccaac
atgggagggaccgtggcccataagatcatgcagaagtatggcttccgggagggccagggg
ctgggcaaacacgagcagggtctcagcacggccctgtctgtagagaagaccagcaagagg
ggtggcaagatcatcataggagacgccactgagaagacaccaggatccagtaaccagacg
gcagcagctgagcctttaggctggggctcggcttcaatagtggacccctccaagaagtca
gaggccaaccccctcacagagatcctcaaatgccctaccaaagttgtgctgctacggaac
atggtgggcagaggagaggtggatgaagatttggaaggggagaccaaagaagagtgtgag
aaatatggcaaggtcatcaagtgtgtcatctttgagattgcccaggtgacagatgatgaa
gcagtgaggatatttctggagtttgaaagagtcgagtctgccatcaaagctgtggtggat
ctgaacgggaggttctttggtggtcgggtggtaaaagcctgcttctataaccaggataag
ttccgagtgttggacctgggagagcagatgtga

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