Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139378630
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Entry
139378630 CDS
T10872
Name
(RefSeq) F-box DNA helicase 1
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139378630
Enzymes [BR:
ocla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
139378630
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
139378630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
F-box-like
F-box
AAA_19
Viral_helicase1
AAA_30
PhoH
AAA_11
AAA_22
ResIII
rve_3
RFC1
Motif
Other DBs
NCBI-GeneID:
139378630
NCBI-ProteinID:
XP_070977074
LinkDB
All DBs
Position
21:complement(15183724..15204855)
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AA seq
1028 aa
AA seq
DB search
MMESSTKGKAKRRHLNSEECREISRRPEGSQPLTQPHSVTRRHSNSDTNRGLYPRTPTKR
KRDARDDKKQQGITKFFPVISVVKVLSPQKAALSQCSGSIKTEGLNGELIPKNETIEEKA
LATSMKEEPEDEKVDYLEGLTTDMFGDDKEFERCWSDPDPALMNHHEEEVEALPDALYGL
LGSSRGLAHPQGHVDDLPEEVLMLVLSLLPAEDLYCNVSLVCQRWRNIVTQSLFVPWKKL
YYRYTKKEIDAVKEINAILETHRIIKDDQESILHIVEFMAQYKPSQKVKPESVLQSVRTH
CLFPQAEACIKHRLPKLEGIEGGPNPWAAMALMLVLCDGVGDVLDLVVCLRSCLPSASAI
TEYLSAMATMLLAMRRNDINISNRWHYNIFYVLHLMENALPTAITNQSGRAQVQVTHEQQ
QILNHDIHRDHVVKIMAFAGTGKTTTLIRYAQLRPHHHFLYMAFNKSVATQAQRCFPSNV
DCRTVHSMAFGAVGKRYQELKKLSSNVKPFSVAWVLPKGSGGFVNAKVVTLTLNAYMASA
DTHITPNHVPNTYKNTHGKMTVPDCNAKRMFARDAQRIWDKMVALEETREYAHHMTHDGY
LKLWQLQRPTLDKYDVIFIDEAQDCTPAIMDIMLLQHCGKILVGDPHQQIYTFRGAVNAL
NLVEHTHLYYLTQSFRFGSEIAYIGATILQVCKKVKKILVGGKQDGCVWGKAVDSLRPLT
TGLSPGRGKLAVLSRSNVSVFDQAVRLTDANPRCRLHIVGGVENFGLKRIMDIWVLMQPE
NNRSRGIKDSFIRRFTQQSLGGYFGLKSYAKKTEDRELEGKLSMVEKYNSRIPELVERLY
GCTEREAQHADFILGTVHKSKGLEFDTVVITDDFAKVPCAAHNLPRLSSCSGGDVPDDEW
NLLYVAVTRAKSSLVITKNITNILTLAGEYFLRTELTSALLTEGQPPCCSVRECHNHIMP
VWPLAMCKLPLQYMDSADDGGPMCGACVLQRVGPTASLLASPELLKVLPVTEERLNLPIN
YALLMALF
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgatggagtcgtccactaaaggaaaagccaagcgaaggcacctgaactcagaggagtgt
cgtgaaattagtaggagaccagagggcagccaacccctcacacagccccactccgtcact
cgtaggcacagcaactcagacactaaccggggtttgtaccccagaacacccacaaagaga
aagagagatgcacgtgatgacaagaagcagcaagggatcacaaagtttttccctgtgatc
agtgtggtcaaggtgttaagtcctcagaaagcagccctgtcccagtgctcaggttccata
aagacagagggactcaatggagagctcatccccaaaaatgagactattgaggagaaggca
ctagccacctctatgaaggaggaacctgaggatgagaaggtggactatctggaggggctg
acaacagacatgtttggggacgacaaggagtttgagcgctgttggtcagatccagaccca
gccttaatgaatcatcatgaggaggaggtggaggccctgcctgacgccctctatggcctc
ttgggaagcagcaggggcctggcccatccccagggtcacgtggacgacctcccagaggag
gtgctgatgctggtgttgagcctcctgcctgctgaggacctctactgtaacgtcagcctg
gtctgccaacgctggaggaacattgtgacccagtcactgtttgtgccctggaagaagctg
tattaccgctacacgaagaaggagatcgacgccgtgaaggagatcaacgccatcctggaa
acccatagaatcataaaggacgaccaggagagcatcctccatatagtcgagttcatggcc
cagtataagcccagtcagaaggtgaagcctgagtcagtgttacagagtgtgaggacacat
tgtctgttccctcaggctgaggcctgcattaaacaccgactccccaaattggagggtatc
gaggggggccctaacccgtgggcagccatggccctgatgctggtgctgtgtgacggtgtg
ggagatgttctggacctggttgtctgtctcagaagctgtctcccttcagccagcgccatc
acggagtacctcagcgccatggcaaccatgctgctcgccatgaggaggaacgacatcaac
atcagcaacaggtggcactacaacatcttctatgtccttcacctgatggagaatgccttg
cccacagcaataaccaatcagagtgggagagcccaagttcaggtgacccacgaacagcag
cagatcctcaaccacgacatccatagagaccacgtggtcaagatcatggccttcgcaggc
acagggaagaccaccaccctgattcggtacgcccagctgaggccacaccaccacttcctc
tacatggccttcaacaagtctgtggctacccaggcccagcgctgtttccccagcaacgtg
gactgcaggacggtccactccatggccttcggggccgtcggaaagaggtaccaggagcta
aagaagttgtctagtaacgtgaagcccttctctgtggcctgggtgctgcctaagggcagc
gggggctttgtcaacgccaaggtggtcaccctgaccctcaatgcctacatggcctcggcc
gacacacacatcacccccaaccacgtcccaaacacgtacaaaaacacacatggcaaaatg
accgtgcctgactgcaatgcaaaaaggatgtttgcgagggatgcccagaggatctgggac
aaaatggttgccttagaagagaccagggagtacgcacaccacatgacccatgatgggtat
ctgaagctgtggcagctgcagaggccaactctggacaagtatgatgtcatctttatagac
gaggcacaggactgtactccagccatcatggacatcatgctacttcagcactgtgggaag
atcctggtgggagaccctcatcagcagatctataccttcagaggagcagtcaatgccctg
aacctggtggaacacacacacctctactacctcacccagagctttcggtttggttcggag
attgcctacattggagccacgattctccaagtgtgtaagaaagtgaagaagattctggta
ggaggaaaacaagacggctgtgtgtggggtaaggctgtggactcactgcgtcccctgact
acagggttgagtcctggccggggtaagttagcagtactgtctcgctctaacgtctccgtg
ttcgaccaagcagtcagactcaccgatgccaacccccgctgtaggctgcacatcgtaggg
ggggtggagaattttgggctcaaaagaatcatggacatttgggttctgatgcagccagaa
aacaaccgctctcgaggcatcaaggacagcttcatccgtaggttcacccagcagagtctg
gggggctactttggactgaagagttacgctaaaaaaacagaggaccgtgagttggagggc
aaactctccatggtggagaaatacaacagccgcatccctgagctggtggaacgcctctac
ggctgcacagagagagaggcccaacacgcagattttatcctggggacagtccataagtca
aagggtctggagtttgacacggtggtgatcactgatgactttgctaaggtcccctgtgcc
gcccacaacttacccagactttccagctgctcaggaggtgacgtcccagacgatgagtgg
aacctgctgtatgtggcggtgactcgggccaagagctctctggtcatcaccaagaacatc
accaacatcctcacacttgctggggagtacttcctgaggacagagttgaccagcgccctg
ctgaccgagggccagcccccatgctgctccgtgcgggagtgtcataaccacatcatgcct
gtctggcccctcgccatgtgcaagctgccactccaatacatggatagtgcagacgatgga
ggtcctatgtgtggggcgtgtgtgttgcagcgtgtcggccccacggccagtctcctagcc
tccccagaactgctcaaggtcctgccagtgaccgaggagcgcctgaacctgcccatcaac
tacgctttgctgatggctctcttctga
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