Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139378655
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Entry
139378655 CDS
T10872
Name
(RefSeq) stabilin-2
KO
K19013
stabilin-2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
139378655
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ocla00536
]
139378655
Glycosaminoglycan binding proteins [BR:
ocla00536
]
Hyaluronan
Cell surface receptors
139378655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
Xlink
EGF_STAB1-2
cEGF
EGF_TEN
EGF_MSP1_1
FXa_inhibition
EGF
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
139378655
NCBI-ProteinID:
XP_070977129
LinkDB
All DBs
Position
21:16284199..16324767
Genome browser
AA seq
2546 aa
AA seq
DB search
MAPVTGPLALMLLLLGLDRYTSSAAAAKNRCDKTTLVMTKTECHSCSVSSNVGCPAGFNK
KIPGKGNPDCKYRVSPMASLVLNIKGCSHECYKEVVEPHCCPGYWGPDCIECPEDADRPC
SNNGLCSEGMGGNGSCSCKPGFVGTACEDCADNLYGSTCSSACTCGHGLCNAGIHGDGIC
TCFSGYKGPKCDLELPECSSLLCPQNTRCMQGSLDGSLRCQCLPGYRTSGDQCISINPCL
QQVCHIHATCAHVGPNKQLCTCAQGYSGDGHVCVPIDPCQTHLGGCSADSARCVYDGPGK
SHCECQDGFDHLTGGVSCSLKDLCRPNSCSKHANCSTVEPNIVECTCHEGYVGNGKICYG
NIMQRLNDLNSEPGGQWTGQLSNAITLFGAITWPLSNFGPFTIFVPINKGFKGTPLITLM
ADPMKAKYLCKLHIAPVEMPYDMLNRGVIYYTLTGKAGETVTTDDDKQLKIRIHGSRKKG
GVLQSDVIASNGIIHIINKLMDSVSPTVESDKKENLMKILSDYGKFSKFKDLLMKANVDS
VLEEAGPSTIFAPTNTAFDAMKEGQLDYLTSSEGSTKLLELLRNHVIPSFNLECYNAVSN
QRIRTIANQILSFNVTENGQILVNGMAVLEADVEAKNGRLYSMDGVLIPPSIEPVLPHRC
DITENKLLKGDCVSCSKVTKSGCASGVSTNTFLRGCVFRNILSFNILTFGCAPICNRTLT
TPLCCKGFYGPDCTPCPGGFNTPCSRHGQCSEGIEGNGTCVCETNFKGSRCHYCSNPNKY
GPACDKTCDCIHGVCDNRPEADGRCKVDSCQPGYTGQYCERHTQACGPQVTFCHAHAECN
FNGGAVRCVCKPGFQGDGITCVYTEPCALPHRGGCDVNAKCIKTGPVSHTCQCLAGWRMD
EDGCQPINDCLGPDRGGCHPNATCIYVGPGQSGCACNSGFRGNGRECEASNPCVAQNGGC
HYLASCLYVSGAWKCVCEDGYTGDGEVCYGNVGQELMALPDVTEFAKWVTDIGISQLPLM
NSQNITLLVPSTAATDKMTKEDKDFWTTQGNLPSIIKNHMIQGVYSLDDLRDASSNLQLT
SVLKKALPVTMTNESTVIGGATITTANVASTNGLIHIIDTVLVPERSLSEGLLELLARRP
EFSLFRSYLVHHNLTAEIEQASAYTVFAPTDGAVLEYLKNTASDTMDLNTTRYHIVLSDR
LMKVDLLGGAYKETMLGFSYQLGILPRDDKLFVNEAQVNVSDILGGKGVIHGLSAVLDIT
KNRCDIQQFKTFPGLCQDCFYPQLNSCPTGATTIALVRKKCMFSRVYQGERLLSIGCRTI
CKNTTIVRRCCGGFYGEHCEPCPGPKGQPCYGNGMCQDRTNGTGVCQCNKSFNGTACETC
QEGKYGIHCDQDCRCKNGRCNDGIHGDGTCECDAYWRGVTCDDKFTREENCGDRKCHTSA
ICVVGRCECLAGFQGNGTDCKAKDACKDNNGGCSPHAVCKRTLPGRRQCVCNTGYHGDGM
VCVQINPCLDGKGGCHVNADCIHTGPNKTSCVCSQGYTGDGKESCTVINLCRTKQRDCHR
YARCNMTGPGERSCTCMGGYMGDGISCKGTVGKELLTRKLRDFYLGLMMADISLKGRGPF
TVFAPTAEAFGQGETAKELRHPSKREKRAKILRYHIVSCHTLLASDLTTPRNLTTLMGDV
LTITYSEGTILINNMVKVVHSDDPSINGIIHEIDTFMIPESLKKADVIEGPLNLTDVADG
NGYKTFYKLLLDTDVMAMVNDPLHQPVTLFLPSDRAMATLPQEQKDFLYNTQNRGHLLEY
LKYHILRDTKVYAAELVHIDPIRTLQGSELKANCGGLDNIGEIFLNDGNCRIIQRHLLFN
GGIAYGIDCLLNPPSLGGRCDKKETVDFPLPCAFCTSSTRCPPGSKLKEVKKCDLHMIVN
MNEGCQAICTFVLWQPKCCAGFYGRDCLVCPGGNTSPCLNHGKCDAGHLGNGNCTCDTGF
HGDACELCKKGHYGPDCTACNCTEHGSCEEGLKGTGSCFCEQGWTGQRCETQLAEGPVCS
PTCSQNGICKENNTCVCKLFYEGDGISCIVADLCKFWNGGCAQGAKCSQKGEKVSCACPQ
GHSGDGFICRPVDPCSVDDNGGCHEHATCTMTGPGKKKCVCKDNYIGDGVTCEVKELLVN
RCLQENGQCHSDAQCTDLHYEDSTVGVFHFRSNKGQYKLNYTSAQEACTGEGGTIATYTQ
LSYAQQAGLNLCAASWLDQARVAYPTTYSNPKCGFGHVGIVDYGLRNNLSETWDTFCYRV
KEVKCECKAGYIGDGYSCTGNLLQVLTEKPTFSNFLSQILNYSQMSVSGKQFMMRLSNLT
IQSTLFVPDNTGLYQNQTLTHRDMEYHLSEGRALALKDLTNGSRIRTRLGQSLVVLGIVD
FLNPKALSSSRYINDRFIVDSDILASNGIIHVLQGPLKAPPPWIVLHAGHKAGMGIGVVL
LITLMAGAGFVGYHFYTHKTKPFQFHYFKEEDETPPDCNPAICNPNIVNPTYDSAPATSE
PVPSELPEEDKHQVVEGGPYDLLQDC
NT seq
7641 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgtgaccggaccactggcgctcatgctgctacttctggggttagaccgctac
acctcctctgctgctgccgccaagaaccggtgtgacaagacaaccctggtgatgaccaag
acagagtgccactcctgtagcgtcagctccaacgtgggctgtccagcaggcttcaacaag
aagatccccgggaagggaaacccagactgcaagtaccgtgtgagtcccatggccagtctg
gtgctgaatatcaagggctgttctcatgagtgttacaaggaggtggttgagcctcactgc
tgtccagggtactggggaccagactgcatcgagtgcccagaggacgcagacaggccctgc
agtaataatggactgtgttctgaaggcatgggtggcaacgggagctgcagctgtaagcct
ggcttcgtgggaacagcttgtgaagactgtgcagataatctttacggctcaacctgtagt
tctgcctgcacgtgtggacatggcctgtgtaatgctggtatccacggtgacgggatatgc
acctgtttctctgggtataaaggcccaaaatgtgatctggagctgccggagtgctcttct
ctgctttgtccacagaacactcgctgtatgcagggctcgctggacgggtcgctgcgttgt
caatgtctacctggctaccgaacctctggagatcaatgcatatccataaacccgtgcctg
cagcaggtgtgccacatccatgccacctgtgcccatgtggggcccaacaagcaattgtgt
acctgtgcccagggctacagcggggacgggcacgtgtgtgttcccatagacccctgtcaa
acacacctgggggggtgctctgctgactctgcgcgctgcgtgtacgatgggccagggaag
tctcattgtgagtgtcaagacgggtttgaccacctgacaggaggggtgagctgcagcctg
aaggacttgtgcagacctaactcctgcagcaaacacgccaactgttcaacagtggagcca
aacatagtagagtgcacatgtcacgagggttacgtcggcaacggcaagatttgctatggc
aacatcatgcagcgtctgaacgatctgaactcagagcccggaggccaatggaccggtcag
ctcagcaatgccatcacactctttggtgccattacttggcccctgagcaactttggcccc
ttcaccatcttcgtcccaatcaacaagggcttcaaaggaactccgctgataactctgatg
gctgacccaatgaaggctaagtacctgtgtaagctgcacattgctcccgtggagatgccc
tatgacatgctgaacagaggggtcatctactacactctgacgggcaaggcaggggagacg
gtgacgacagatgacgacaagcagctcaagatccgtatccatggcagcaggaagaagggc
ggggtcctgcagtctgatgtcatcgcttccaatgggatcatccatattatcaacaagctg
atggacagtgtctcacccacggtggagagcgacaaaaaggagaatctgatgaagattcta
tcagactatgggaagttttccaagttcaaggatttgttgatgaaagccaatgttgattct
gtattggaggaggctgggccctccaccatctttgcccccaccaacacagccttcgatgcc
atgaaggagggacagctggactatctcacctctagtgagggaagcactaaactactggag
ctactaaggaatcatgtgatcccctcattcaatttggagtgctataatgctgtgagcaac
cagcggattaggaccattgccaatcagatcctctcgttcaatgtgactgaaaacggtcaa
atcctggtcaacggcatggctgtactggaggcagacgtggaggccaagaacggacgcctc
tattcgatggacggagttctaatcccgccctccatcgagccggtactgcctcacaggtgt
gacatcacagagaacaaacttttgaagggtgactgtgtcagctgctcaaaggtgaccaag
tccggctgcgcatccggagtgtccacaaacaccttccttcgcggctgtgtgttccggaac
atattgagtttcaacatccttacgtttggctgcgcccccatatgcaacaggaccctcacg
acaccactgtgctgtaagggcttctatgggccagactgcaccccatgtcctggagggttc
aacaccccctgctcccgtcacggacagtgttctgaggggatcgagggaaacgggacgtgt
gtctgcgagaccaacttcaaaggctcccggtgtcactactgctccaaccccaacaaatac
ggaccagcctgcgacaaaacttgtgactgtatccatggtgtgtgtgataaccgtcccgag
gcagacgggcgttgtaaggtggactcctgccagccgggctacactggccagtactgtgag
cgccacacccaggcctgtggcccccaggtgaccttctgtcatgcccacgcagagtgtaac
ttcaacggaggggcagtcaggtgtgtgtgtaaacctggtttccaaggcgatgggatcacg
tgtgtgtatacggaaccctgtgcccttccgcaccgtggaggatgcgatgtgaatgccaag
tgtataaagacagggccagtctcacacacatgccaatgtttggcaggatggaggatggat
gaggatgggtgccagcctatcaatgactgcctgggccctgacagagggggatgccatccc
aatgccacctgcatctacgtgggccctggacagagcggctgtgcgtgcaatagtggtttc
cgtggcaatgggagggagtgcgaggcgagcaatccgtgcgtggcacaaaatggcggctgt
cattatctggcaagctgtctctacgtgtccggtgcatggaagtgtgtgtgtgaggatgga
tacacaggtgacggagaggtgtgctacggcaacgtgggacaggagttgatggcccttcct
gatgtcactgagttcgccaaatgggtgactgacataggcatttcccagctgccactcatg
aacagtcagaacataactctgctggtgccgtccacagcagctacagacaagatgaccaaa
gaggacaaggacttctggacaacccaggggaacctacccagtatcatcaaaaatcacatg
atccaaggtgtctactcactagatgacctacgcgatgcgtcctccaacttgcagctcact
tccgttctgaagaaggctcttcctgttactatgaccaatgagtccacagtgattggagga
gccacaataacaaccgcgaatgtggcttcaaccaatggactgatccacattattgacacg
gtgttggttccagagaggagtctcagtgaggggctgctggagctgcttgcacggaggcca
gagttctccctgttcaggagttaccttgtccatcacaacctgacagcagagatagagcag
gcctcggcctacacagtgttcgctccaacagacggcgctgtcctcgagtacctcaagaat
accgcttcagacaccatggacctgaatacgacgcggtaccacatagtgctgtctgatagg
ttaatgaaggtagacctgctgggtggagcctacaaggagaccatgctggggttctcctac
cagctaggcatcttacccagggatgacaagttgtttgtgaatgaagcccaggtaaatgtg
tcagacatcctgggaggtaaaggggtgatccacggcctatctgcagtactagatatcacc
aaaaatcgctgcgacatccagcaattcaagacatttccgggattgtgtcaagattgcttc
tacccacaactcaactcctgtccaactggagctaccacaatagcattggtcaggaaaaag
tgtatgttcagtcgggtctaccagggagaacggctgctcagcatcggctgcaggaccatc
tgcaagaacactaccattgtgcggaggtgctgtggcgggttctacggggagcactgtgag
ccgtgtccagggcccaaaggccagccttgctatgggaacgggatgtgccaggacaggacc
aacggtacaggggtttgccagtgtaacaagagcttcaacgggactgcttgtgaaacgtgc
caggagggcaaatacggcatccactgtgaccaagactgtaggtgtaagaacggccggtgc
aacgacggtatccatggagatgggacatgcgagtgtgatgcgtattggagaggggtcacc
tgtgatgacaagttcaccagagaagagaactgtggggacaggaagtgccacaccagtgca
atatgtgtagtaggtcgctgtgaatgtttggccgggtttcagggtaacggcactgactgc
aaagcgaaagatgcctgcaaagacaataacggaggatgcagtcctcacgctgtgtgtaag
aggactctccctggacgcaggcagtgcgtgtgcaacacgggatatcacggcgatgggatg
gtgtgtgtacagattaacccctgcctggacggtaaaggaggctgccatgtgaatgcagac
tgtattcacaccggacctaacaaaacgtcgtgtgtgtgcagccaaggctacacaggagat
gggaaggagtcttgtacggttatcaacctctgtcgaacgaaacaaagggactgccacagg
tacgccaggtgtaatatgactggtccaggggaacgcagctgcacctgtatgggtggatac
atgggcgacggcattagctgcaaaggcactgtgggcaaggagcttctcaccaggaaactg
agggatttctatcttgggttgatgatggcagatatctctctgaagggccggggtccattc
acagtctttgctccaacagctgaggccttcggccagggggagacggcaaaagagttgagg
catccctcaaagagagagaagagggccaagattcttcgctaccacatcgtgtcatgtcat
accctattggccagcgacctgaccacgcccagaaacctgaccactctcatgggagacgtc
ttgaccatcacctactctgagggtaccatcctcatcaacaacatggtgaaagtggtgcac
agtgatgacccgagcatcaatgggatcatccatgagattgacaccttcatgataccagag
agtctgaagaaggctgatgtgatagaggggccattgaacctcactgatgtggctgatggt
aatggttacaagaccttctacaaactgctgttggacacagatgtgatggcaatggtgaac
gaccccctccaccagcccgtgacattgttcctgccgtcggaccgcgccatggccacactg
ccccaggagcagaaagacttcctttacaacacacagaacagaggacacctgctggagtac
ctcaaataccacatcctccgagacaccaaggtgtatgcagcagagctggtccacatcgat
cctatacggacgctccagggatccgaactcaaagccaactgtggagggctggacaacata
ggtgaaatcttcctcaacgacgggaactgccgaatcatccagaggcacctcctcttcaac
ggtgggatagcctatgggatcgactgtctgctgaacccgccgagcctcgggggtcgctgt
gacaaaaaggaaactgtagatttcccgctaccctgtgcattctgcacatcatcaacacgc
tgcccccctgggtccaaactcaaggaggtgaagaaatgtgacctgcacatgatagtgaat
atgaatgaaggctgccaggccatatgtacttttgttctctggcaacccaagtgctgtgct
ggcttctacggacgtgactgtctggtttgtcctggcgggaatacatctccctgtttgaac
catggaaagtgtgatgccggtcacctaggcaacggtaactgcacatgtgacactggtttc
catggcgacgcctgtgagttgtgtaaaaaaggccactatggaccggactgcacagcatgt
aactgcacagagcatgggtcatgtgaagaaggccttaaagggacaggctcctgtttctgt
gaacagggctggaccgggcaacgctgtgagacacaactagcggagggtccagtctgctcg
ccaacctgctctcagaacggcatatgtaaagagaacaacacctgtgtatgtaaacttttc
tacgagggagacggcatcagctgcatagtggccgacctgtgtaagttctggaacggtggc
tgtgcccagggagctaagtgcagtcagaagggggagaaggtgagctgtgcctgccctcag
ggacactctggagacggcttcatctgtcggccagtagacccttgctccgtcgatgacaac
gggggttgccacgagcacgccacctgcaccatgactgggccgggaaagaagaagtgtgtg
tgtaaggataactacatcggggatggtgtgacgtgtgaggtgaaggagcttcttgtgaac
cgttgtctccaggagaacgggcagtgccactctgacgcccagtgtaccgaccttcactac
gaggacagcacagtcggtgtgttccacttccggtccaacaagggacagtacaagctgaac
tatacatcggcccaggaggcctgcacaggagaggggggaaccatcgccacgtacacacag
ctctcctacgcacagcaggctgggctcaacctgtgtgcggctagctggctggaccaggcc
agagtggcctaccccaccacctactccaaccccaagtgtggctttggtcacgtgggcatc
gtagactacggcttacgcaacaacctcagtgagacctgggacaccttctgctacagggtc
aaggaggtgaaatgtgaatgtaaagcaggttatataggagatggatactcctgcactgga
aacctcctgcaggttctcactgagaagcccaccttctccaacttcctctctcaaatcctg
aactactcccagatgtccgtgtcaggaaaacagtttatgatgcgcctcagtaacctgacc
atccagtccactctgtttgtacctgataataccggactgtaccagaaccagacactgacc
cacagggacatggagtaccacctctcagagggccgggccttggccctgaaagacctgacc
aacggcagccgtatccgcacccggctgggccaaagcctcgttgtcctgggtatcgttgac
ttcctcaaccccaaggccctgagttcctcccgttatatcaacgaccgcttcatcgtcgac
tccgacatcctggcatccaatgggatcatccatgtgctgcagggacccctcaaagcccca
cccccttggatagtgctccacgcaggtcacaaggcagggatggggattggagttgtgctg
ctgatcacgctgatggctggggctgggttcgtaggctaccacttctacacccacaagacc
aaaccgttccagttccactactttaaggaagaggacgagacgcctccagactgcaaccct
gccatctgcaaccccaacattgttaaccccacttatgactccgcccctgccacaagtgaa
ccagttccatctgagctccctgaggaggacaaacaccaggtggtagagggtggcccgtat
gacctgctccaggactgctga
DBGET
integrated database retrieval system
