Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139378730
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Entry
139378730 CDS
T10872
Name
(RefSeq) transcription factor E2F3-like
KO
K06620
transcription factor E2F3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04110
Cell cycle
ocla04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
139378730
04218 Cellular senescence
139378730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139378730
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
139378730
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Gene cluster
GFIT
Motif
Pfam:
E2F_CC-MB
WHD_E2F_TDP
Motif
Other DBs
NCBI-GeneID:
139378730
NCBI-ProteinID:
XP_070977278
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Position
2:1482422..1492026
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AA seq
440 aa
AA seq
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MRRGISSAPDKVIIAGVGGSLDKNAVLTALSDRLTPHFTTATYIQIITPPPCITQTSNVC
LSEPPAGSIYSTPNGATNGTGQRPTLGRPPAKRRLALDESDHQYPIEGARTPRGKAGGAS
GPGLKSPKTPRSPVEKTRYDTSLGLLTKKFVELLGQSSDGVIDLNQAAEVLKVQKRRLYD
ITNVLEGVHLIKKKSKNNIQWMGCNLSEDGSTLTSSQSLSSELCDLGQEERRLDELIQSC
TLDVQQMTEASHSHKFAYVTYQDIRQLRHLKDQTVIVVKAPSETKLEVPDPQEGLSVLLT
STKGPIEVFLCPEENIGSPVKNGGPDVQGHSSPFLKVSAESSTGGSNVYVPPDPSAVMVT
NLSPITSPFTSLLLQTEDQIPSSLSGLLEGHGAGPFVNLSPPLLNEDYMLSLEDDEGISD
LFDTCDFDKLPLEELMCPSM
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagaagagggatctcatcagccccggataaagtaataatagcaggggttggaggctct
ttagataaaaatgcggtattgacagcattgtccgaccggttaacccctcattttacaact
gccacttatatccaaattataactccaccgccttgcattacacagacttcaaatgtctgt
ttgtccgaacctccagctggcagtatatattccactccaaacggagcaacaaacggaacc
ggacaacgacctacattaggacgtccaccggccaagcggaggttggcgttggatgagtcg
gaccaccagtaccccatcgaaggagccaggacccccaggggaaaggctggaggagcctcc
gggcctgggctcaagagccccaaaactccgaggtcaccggtagagaagacgcgctacgac
acgtcgttgggcctgctaacgaagaagtttgttgagctgctgggccagtcgtctgacggt
gtcatcgacctcaatcaggccgcggaggttctcaaggtgcagaagagacgcctctatgac
atcaccaacgtactggagggggtgcatctgatcaagaagaagtctaagaataacatccag
tggatgggttgtaacctgtctgaggatgggtctacgttgaccagcagccagagtctgagc
agtgagctgtgtgacctgggtcaggaggagaggagactggacgagctgatccagagctgt
accctggacgtccaacagatgacagaggcctcgcacagccacaagtttgcatatgtgaca
tatcaagacatccgtcagctacgtcacctgaaggaccagacggtcatcgtggtgaaagct
ccctctgagaccaagttggaggtgccagacccacaggagggcctgtcggtccttctcacc
agcaccaaggggcctattgaggtgttcctctgtccggaggagaacatcggtagtcctgtg
aagaacggcggcccggatgtccaaggacactcctcacctttcctcaaagtgtcagcagag
agctcaacaggcggcagcaacgtctatgtccctccagatccctctgcggtgatggtgacc
aacctgtcccccatcacctcccctttcaccagcctcctgctgcaaacggaggaccagatc
ccctcctccttgtctgggctcctggagggccacggggccgggcccttcgtcaacctgtcc
ccccctctcctcaacgaggactacatgctgagcttagaggacgacgagggaatcagcgat
ctgttcgacacctgtgactttgacaagcttcctctggaagaactcatgtgtccctcgatg
taa
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