KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139378746
Entry
139378746         CDS       T10872                                 
Name
(RefSeq) transportin-3 isoform X1
  KO
K15436  transportin-3
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03013  Nucleocytoplasmic transport
ocla03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    139378746
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    139378746
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ocla03016]
    139378746
Transfer RNA biogenesis [BR:ocla03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    139378746
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_3rd TPR_TNPO3_IPO13_2nd Xpo1 IBN_N
Other DBs
NCBI-GeneID: 139378746
NCBI-ProteinID: XP_070977301
LinkDB
Position
21:complement(21468107..21486127)
AA seq 921 aa
MEKPTVALVYQAVQALYHDPDPAGKERASVWLGELQRSMYAWEMADQLLQLKQDVESCYF
AAQTMKMKIQTSFFELPPETHIALRDSLLSHIQSLKDLSPIIVTQLALAIADLALQMASW
KGCVHTLIEKYSNDVSSMTFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSSTVVT
LLMTCVEKSGSNEKMLIKVFRCLGSWFNLGVLDSNFMANNQLLMVLFQVLQRDETSTNLH
EAASDCVCSALYAIENVDTHMPLALQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFTEL
CETFLETTVKSPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGENLYKTNDPALH
GIFRPYIQRLLHGLARHCQLDPDHEGIPEDTDDFGEFRMRVSDLVKDVIFLVGSMECFSQ
LYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPENNPTLTEVLEQVVLLPETVHIAVRYTSI
ELVGEMSEVVDRNPRFLDPVLNYLMKGLREKTLASVAAKAIHNICSVCRDHMAQHFQGLL
DIARALDSFALTTEAAVGLLKGTALVLARLPLEKIAECLSDLCAVQVMALKKLLSQDPSN
GKAADPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSQTLNTHQADNRIVERC
CRCLRFAVRCVGKGSASLLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGMEEGCRQGLL
DMLQALCMPTFQLLEQPNGLRNHPDTVDDLFRLATRFVQRSPVTLLSSGIIVHIIQCAIA
ATTLDHRDANCSVMKFVRDLIHTGISNDHEDDFELRKQLIGQAMGQHGQQLVTQLMHTCC
FCLPPYTLPDVAEVLWEIMVFDRPTFCRWLENALKGLPKETSGGAVTVTHKQLTDFHKQV
TSAEECKQVCWAIREFTRLFR
NT seq 2766 nt   +upstreamnt  +downstreamnt
atggagaaaccgacagtcgcacttgtgtatcaagctgtgcaggctctttatcatgatccg
gaccccgccggtaaagagcgagcttcggtttggctgggggagctacagagatcgatgtac
gcgtgggagatggcagaccagctcctccagctgaaacaggacgtggagtcttgttacttt
gccgcccagaccatgaagatgaagattcagacgtcgttctttgagctccccccagagacc
cacatcgccctccgagactccctgctctcacacatacagagcctcaaagacctttccccc
atcatcgtcactcagcttgctctggccattgcagacctcgccctacagatggcctcctgg
aagggctgtgtccacaccctcattgaaaagtatagcaatgatgtcagctccatgacgttt
ctgatagagatccttacagtgctccccgaggaggtccacagccgctccctacgcatcgga
gccaatcgcaggacagagatcatcgaggacctggcctattactccagtactgtggtcacc
ctactgatgacatgtgtggagaagtctggcagcaatgagaagatgctgatcaaggtgttc
cgctgtctgggaagctggttcaacctgggagtcctggacagcaactttatggccaacaac
cagctcctgatggtccttttccaagtgctgcaaagagacgagacgtccactaacctgcac
gaggctgcgtccgactgtgtgtgttcagcgctgtacgccatcgagaacgtggacacacac
atgcccctggccctgcagctttttcagggcgtcctcacgctggagacggcctaccatatg
gctgtggcacgggaggacctcgacaaagtgttgaattactgtaggatcttcactgagttg
tgtgagacgtttctggagaccacagtcaagagtccaggccagggcatgggagacctgcga
acgctcgagctgctgctcatctgtgcaggacacccccaatatgaggttgtggagatctca
tttaacttctggtatcgtctgggagagaacctgtataagaccaacgaccctgccctccac
ggcatcttcagaccctatatccagagactgctgcacggcctggcccgccactgccaacta
gaccccgaccacgagggcatcccagaagatacagatgactttggggagttcaggatgagg
gtgtctgatcttgtgaaggatgtaattttccttgtgggctccatggaatgtttctcccag
ttgtactccactctaaaagaaggcaaccctccctgggaggtgaccgaggctgttctcttc
atcatggccgccatcgccaagagtgtagaccctgagaacaaccccaccctgacagaggtg
ttagagcaggtggtgctgctgccggagactgtccatattgccgtgcgctacaccagcatt
gagctggtgggggagatgagcgaggtcgttgaccgcaacccgcggttcctagaccccgtg
ctgaactacctgatgaagggcctgagggagaagaccctggcttccgtggcagccaaggcg
atccataacatctgctctgtgtgccgggaccacatggcccagcacttccagggcctgctg
gacatcgcccgtgccctcgactcctttgccctgaccaccgaagccgccgtaggcctcctc
aaaggtacagccctggtcctggctcgtctgcccctggagaagattgctgagtgtttgagt
gacctgtgtgctgtgcaggtcatggccctcaaaaagcttctctctcaggaccccagcaat
gggaaagccgctgaccccactgtctggctggacagactagcagtaatcttccgacacaca
aaccccattgtagagaatggacaaacacacccatgtcagaaagtcatccaggagatctgg
ccggtcctgtcacagactctaaacacacaccaggctgataaccgcattgtggaacgctgc
tgtcgctgcctgcggttcgctgtgcgctgcgtgggcaagggctctgcctctctactacag
ccactcgtcacacagatggtcagtgtgtatcaggtgtatccccactcctgcttcctttat
ctgggcagcatcctggtggatgagtacggcatggaggaaggctgcagacaaggtctacta
gacatgctacaggctctgtgtatgcccaccttccagctgttggagcagcccaacggtctc
cgtaaccacccagacacagtagatgacctcttcagactcgccaccaggtttgtccagcgt
agtcccgtcaccctgctcagcagtggcatcattgtccacatcatccagtgtgctatcgct
gccaccacactggaccaccgggatgccaactgcagtgtcatgaagttcgtcagagacctc
atccacacgggcatcagcaacgaccacgaggatgactttgagctgcggaagcagctaata
ggccaggccatggggcagcacgggcagcagttggtcacccagctcatgcacacatgctgc
ttctgcctgccaccttacacactccccgatgtggctgaggtgctctgggagatcatggtg
ttcgacaggccgacgttctgccgctggctggagaacgcgctgaaggggcttcctaaggag
acgtcaggcggggcggtgaccgtcacacacaaacagctcacagacttccacaagcaggtc
accagtgcggaggagtgtaagcaggtgtgctgggctatccgggagttcaccagattgttc
cgatag

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