Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139378763
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Entry
139378763 CDS
T10872
Name
(RefSeq) cadherin EGF LAG seven-pass G-type receptor 1-like isoform X1
KO
K04600
cadherin EGF LAG seven-pass G-type receptor 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139378763
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ocla04030
]
139378763
04515 Cell adhesion molecules [BR:
ocla04515
]
139378763
Peptidases and inhibitors [BR:
ocla01002
]
Mixed peptidases
Family P2
139378763
G protein-coupled receptors [BR:
ocla04030
]
Adhesion receptor family
Cadherin EGF LAG (CELSR)
139378763
Cell adhesion molecules [BR:
ocla04515
]
Cadherins
Major cadherins
139378763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
7tm_2
GAIN
Cadherin_CELSR2_9th
Laminin_G_2
Laminin_G_1
EGF
GPS
EGF_laminin
EGF_TEN
Dicty_CAR
hEGF
Fibulin_C
Cadherin_4
K319L-like_PKD
Frizzled
Motif
Other DBs
NCBI-GeneID:
139378763
NCBI-ProteinID:
XP_070977342
LinkDB
All DBs
Position
21:22086173..22212258
Genome browser
AA seq
3106 aa
AA seq
DB search
MELPMNWIWVCVLFNVPLLGCFELHLSETLQTGTVLANLSLGPGWTYNIDRTLTPKYIQN
FLQVEWQEGALRMYRKVDCVRLLRNPVPVYIRIGSLTSENFVLTHFNTFVHGQDCFIKYK
RKSTIGKPDIHINYFSKLEATSCLSAGNLLVNVTELLPAFSRNTTFSASCSTVKDLRAVF
KHGNILLDDNYCLGEGELSEVHLYCTLRSLSDRRVRISVRVRLRLVTVVEGETHEQHTPS
PLHPIQIVPGKWNHRKRRNVNTPPQFQLPNYQVSVPENEPSGTRVITLKATDPDDGEAGR
IEYGMEALFDSRSNDFFVINPQTGAITTVQPLDREVKDTHVFKVMVTDNGSPRRSATSYL
TVTVSDTNDHGPVFEQTEYRVTIRENVEVGFEVMTIRATDGDAPSNANMVYKIVNGGGVN
AGFEIDPRHGLVRIRERPDRETMSQYQLIVEANDQGKDPEPRSATATVNISVEDENDNYP
QFSEKRYVVQIPENVAVNSKVTQVEATDKDEGNNAKVHYSIISGNVKGQFYIHSPTGVID
VINPLDYEMIREYNLRIKAQDGGRPPLINGTGMVVVQVVDVNDNAPMFVSTPFQATVLEN
VAIGYSVIHIQAIDADSGNNARLEYRLTDTSPGFPFTINNSTGWITVAAELDRETTEFYT
FGMEARDCGIPAMSSSASVSITVLDVNDNIPTFTEKVYSLKINEDAVVGTSVLTVTAIDR
DVNSVVTYQISSGNTRNRFAITSQSGGGLITLALPLDYKQERQYVLTVTASDGTRYDMAQ
VFINVTDANTHRPVFQSANYQVTISEDRPIGSTVVVISATDEDTGENARITYIMEDNVPQ
FKIDPDTGAITTQMEIDYEDQASYTLAIIARDNGIPQKSDTTYVEIIILDANDNTPQFLR
DMYQGTVFEDAPIYTSVLQISASDRDSGSNGRLSYTFQGGDDGEGDFFIEPYSGIIRTAR
KLDRENVPVYTLKAFAVDKGIPPLKAAVDIQVSVLDINDNAPVFEKDELFIYVEENSPVG
SVLARISATDPDEGTNAQIMYQIVEGNIPEVFKLDIFKGDLTALMDLDYESRTEFVIVVQ
ATSAPLVSRATVHIRLVDINDNDPVLQNFEIIFNNYVTNKSNSFPSGIIGKVPAHDPDVS
DKLHYSFESGNELNLLVLNADTGELKLSRDLDNNRPLEAPMTVSVSDGIHQVTALCTLRV
TIITDDMLTNSITVRLENMSQERFLSPLLSLFLEGVAAVLSTSRQAVFVFNIQNDTDVRG
AILNVTFSALQPGGPPGRYFPSEELQEQIYLNRTLLRLISSQQVLPFDDNICLREPCENY
MKCVSVLKFDSSPPFISSDTVLFRPIHPINGLRCRCPAGFTGDYCETEIDLCYSGPCRNN
GKCRSREGGYTCECQEDFTGEQCEVNARSGRCVPGVCKNGGKCVDLLVGGFMCQCPPGEY
EKPYCEMTTRSFPGQSFITFRGLRQRFHFTVSFMFATRERNALLLYNGRFNEKHDFIALE
IIEEQIQLTFSAGESKTVVHPFVPGGVSDGQWHSVQLHYYNKDSLHLLGSSGVLGVPLYT
AWLELTHKEPNIGRLGIPHGPSGEKVAVVAVDDCDIAMAVRFGNQIGNYSCAAQGTQTGQ
KKSLDLTGPLLLGGVPNLPEDFPVRNRDFVGCMRNLSIDSKPTDMASFIANNGTTAGCPA
KINFCTKDLCQNGGVCVNKWNTYSCDCPLGYGGKNCEQVMPSPQHFDGQALVSWSDLDVT
IAVPWYMGLMFRTRQGTGTLMQANAGDFSTINLLISDQYVRFEVFLGSERVAVLGFPQVR
VNDGEWHHVLVELKSVKDGKDIKYMALVSLDYGLYERSVEIGNELPGLRLRALYLGGLPG
EGNHVHDGFTGCIQGARMGETSTNVVNVNMLQGFKIRVEDGCDLADPCDSNICPENSHCS
DDWSTHTCVCDPGYFGRECVDACHLNPCEHVSTCVRKPSSSHGYTCECGQNYYGQYCENK
VEKPCPRGWWGNPMCGPCNCDISKGFNPDCNKTSGECRCKDNYYRPKDEDTCYPCECFPL
GAHSRTCDTHTGQCPCKAGVIGQQCNRCDNPFAEVTATGCEVVYEGCPKAFDQGIWWPKT
KFGRPAAMNCPKGSIGTAIRHCNDEKGWLPPELFNCTTVSFSQLMKMNEEMHRNESRMDG
ERSKAIVRLLHNATNHTDSYYGNDVKTAFQLLTRVLQYESQQTGFDLTATRDAEFNENLV
RAGSAILDPGTRDHWEQIQRSEGGTAHLLRHFEDYTNTLARNMRKTYLIPFTIVTDNMII
VVDYLDASVPGQASFPRFHEIQEYYPKDLTSSVHFPQFNTRPQEVPNQVVEPSPSAEPSK
TDAPEEYHTLSNKRRRHVEPAVPLPVAVVIVFRSLGQLLPERYDPDRRSLRLPNRPVINT
PIVSTLVYSEGSPLPSPLDPPVTLEYTLLETEERTKPVCVFWNHSIAIGGTGGWSSKGCE
LLNRNNTHISCQCDHMSSFAVLMDISKREHGDVLPLKIVTYTTVSASLVALLLTFILLAL
LRKLRSNLHSIHRNLVAALFFSELVFLIGINQTDNPFVCTVIAILLHYFYMCTFAWMFVE
GLHIYRMLTEVRNINHGHMRFYYAMGWGIPAIITGLAVGLDPQGYGNPDFCWLSVHDTLI
WSFAGPISVVVLVNIVIFVLAAKASCGRRQRSFEKSGAIPALRTAFLLLLLISATWLLGL
MAVNSDVMTFHYLFAIFSCLQGIFIFFFHVIFNKEVRKNLKNVFTGKKALPDESSTTRAS
LLTRSLNCNNTYTEDGPLYRSAIGESTVSLESAVRSAKSHSSYLAYTLRGDSGQKPSVSS
ATAKAGHTDLDGSLFHRNGTKGGDDSDSDSELSVDEHSSSYASSHSSDSEDDDMDIKPKW
NNERQPLHSTPKGTSIATKVEAVSNHVKPYWPKEATTASDSEDPGGAERLRVETKVNVEL
HQENKLNHVGERGETPQDRETPTRENGPPSLPSNGPSNGPPSLPNSTHQPEPKKGILKNK
ITYPPPLTDKNMKNRLREKLSDYNPPTISSSIPPPIIPPSKTPSVASNDGVHPVSVGKSN
SVVIKPPIAPRPQLPQNGGVAMSMKAITTNGGNESDSEKTRVSLPL
NT seq
9321 nt
NT seq
+upstream
nt +downstream
nt
atggaattaccgatgaattggatctgggtttgtgttctattcaatgtgcccttgctggga
tgtttcgagctacacctttcggagacgttacaaactgggaccgttttggcaaatttgtcc
ctggggcccggttggacatacaacatcgacaggactttaactcctaaatacattcagaac
tttttacaagtggaatggcaagaaggagctctccgtatgtaccgaaaagtggattgtgtg
cgcttattgaggaacccagtgcctgtctatatcaggatagggtcgttgacgtctgagaat
tttgttttgacacatttcaatacatttgtacacggacaggactgttttatcaaatacaag
agaaagagcacaataggtaagcccgacattcacatcaattacttttccaaactggaagca
acttcctgcttatccgcgggtaatttgcttgtgaatgtaacagaacttttgcctgccttt
tcgcgaaataccactttttctgcctcctgttctactgtaaaagatttgagggccgttttt
aaacatggcaatatattgctggacgacaactactgtttgggtgaaggagagctgagcgag
gtacatttgtattgtacactgcgatctctgagtgaccggcgcgtccgcatctccgtgcgc
gtgaggttgcggttggtgacagtggttgagggagagacccatgagcagcacacaccatca
ccattacaccccatccagattgttcctggcaaatggaaccaccgaaaacggagaaatgtg
aacacacctccccagtttcagctccccaactaccaggtgtctgttcctgagaatgaacca
tcagggacccgtgtcatcacactgaaggccactgatccggatgatggagaggccggtaga
atagagtatggaatggaggccctctttgacagcagatccaacgacttttttgtaattaac
cctcagacaggtgctattacaacagtgcaacctttagacagggaggtcaaagacacacac
gtctttaaagtaatggtaacagacaacggctcccctcggcgctcagccacgtcttacctc
accgtgacggtcagcgacaccaacgaccacggcccggtgttcgagcagactgaataccgg
gtaaccatacgggagaatgtagaggtgggctttgaggtcatgaccataagagccacagac
ggggacgcaccctccaacgccaatatggtctataaaatagtcaacggcggcggagtgaac
gctggttttgagatcgacccacgccacgggctagtgaggatcagagagcggcccgacaga
gagaccatgtcccagtaccagctgatcgtggaagccaacgaccaggggaaagaccctgaa
ccccggagcgccacggccaccgtcaacatctctgtagaggacgagaacgacaactacccc
cagttcagtgagaaacgttacgtggtccaaatccctgagaacgtggccgtcaactctaaa
gtcactcaagtcgaggccacggacaaagacgagggaaacaacgctaaggtccactacagc
atcatcagtggcaacgtgaagggacagttctacatccactctcccactggggtcatcgat
gtcattaatcccttggattacgagatgattagggagtataatttacggattaaagctcag
gatggtggcaggcctccgttgatcaacgggactgggatggtggtggtccaggtggttgac
gtaaatgataacgctcctatgtttgtcagcacgccgttccaagccactgtgctggagaat
gtggccattggctactcggtaatccacatccaggctatagatgctgattctgggaataat
gcacgtctagagtaccgtctcactgacacctcccctggtttccccttcaccatcaacaat
agcactgggtggatcacagtcgccgcggagctcgacagggaaaccaccgagttctatacc
ttcggcatggaagcgagggattgtgggatacctgcgatgtcatcctcggccagcgtgagc
atcacggtcctagatgtgaacgacaacatcccgaccttcacagagaaggtgtattctctg
aagattaatgaggatgctgtggtggggaccagtgtgttgacagtgacagccatcgacagg
gatgtaaatagcgtcgtaacctatcagatctctagcggcaacaccaggaaccgtttcgcc
atcaccagtcagagtggaggtgggctcatcaccttggcgttacccttagactacaaacag
gagcgccagtatgtcttgacggtgactgcgtcagacggtacgcgttatgacatggcacag
gtgttcatcaacgtcacggatgccaacacgcaccgtcctgtgttccagagcgccaactac
caggtgacgattagtgaggaccggcccattgggtccaccgtggtcgtcatcagtgccacc
gacgaagacacgggtgaaaatgctcgcatcacgtacatcatggaggacaacgtcccccag
tttaagatcgaccccgacacgggcgccatcaccacccagatggagatagactacgaggac
caggcatcgtacacgttagccatcatcgccagggacaacggcattcctcagaagtccgat
acgacctatgtggagataataatcctggatgccaacgacaacacacctcagttcctacgg
gacatgtatcagggaactgttttcgaggacgcacccatttacaccagcgtgctccagata
tctgcctccgacagggactccgggtccaacggaaggctgagctacaccttccagggtgga
gatgatggggagggggacttcttcatcgagccctactctggcatcatcagaacagccagg
aagttagacagagagaacgtgcctgtgtataccctgaaggccttcgctgtggataagggg
attcctcctctcaaagcagcggtggacatccaggtgtctgtgctggatatcaacgacaat
gcgcccgtgttcgagaaggacgaactgtttatctacgtagaggagaacagtcccgtcggt
tccgtcttggctcggatcagcgccaccgacccagatgagggaaccaacgctcagatcatg
taccagatcgtggaggggaacatccctgaggtcttcaaattggacatcttcaaaggcgac
ctcaccgccctcatggacctcgactacgagtctagaaccgagtttgtcattgtggtacag
gccacgtccgctccgcttgtcagtcgtgccactgtccacatccgtttagtcgacatcaat
gacaacgacccggttctgcaaaactttgagattatcttcaacaactatgtgaccaacaag
tccaatagtttcccctcagggatcatagggaaggtgcctgcccatgacccggacgtgtcg
gataaactccactacagctttgagtcagggaatgagctgaacctactggtgctgaatgca
gacacgggggaactaaagctcagcagagacctggataacaacagacctctagaggccccc
atgactgtctctgtctcagacggaatccatcaggtcacagctctgtgcaccctgcgtgtc
accataatcacagacgacatgttgaccaacagcatcacggtgcgcctggagaacatgtct
caggagcgcttcctgtcccctctgctgtccctcttcctggagggtgtggcagccgtgctc
tccaccagccgccaggccgtctttgtgttcaatatccagaacgacacagacgtgcggggc
gccatcctcaacgtgaccttctcggcgctgcagccagggggtcccccagggaggtacttc
ccctccgaggagctgcaggagcagatctacctgaaccgcaccctgctccggctaatatca
tcacaacaggtgcttcccttcgacgacaacatctgcctgagggagccatgtgagaactat
atgaagtgtgtgtctgtgctgaagtttgacagctccccgcccttcatctcctccgacacg
gtgctgttccggcccatccaccccatcaacggtctgcgctgccgctgtcctgcaggcttc
accggggactactgcgagacggagatagacctctgctactcaggaccctgcaggaacaac
gggaagtgtcgcagccgagagggaggctatacctgcgagtgtcaggaagacttcactggc
gagcagtgtgaggtgaacgcccggtcggggcggtgtgtcccgggggtgtgtaagaacggg
gggaaatgtgtagacctgctggtgggggggttcatgtgccagtgtcccccgggagagtac
gagaagccttactgtgagatgaccaccaggtccttccctggtcagtccttcatcaccttc
agaggactgcgacagaggttccactttactgtctcattcatgtttgccaccagagagagg
aatgccctgctgctgtacaatgggagatttaacgagaagcacgactttatcgccttggag
attatcgaggaacagatccaactcaccttctctgcaggagagtcgaagaccgtggtccat
ccctttgttcccggtggggtcagtgacggccagtggcactctgtccagctgcactactac
aacaaggacagcctgcacctgctggggtccagtggggtgctgggggtccctctttatact
gcctggctggagctgacacacaaggagcccaacattggtcgactggggatcccccatgga
ccctcaggtgagaaggtggctgtggttgctgtggacgactgtgacattgccatggcagtt
cgttttggcaaccagatcggcaattactcctgtgctgcccagggaacccaaacaggacag
aaaaaatcattggacctgacaggaccgctgctgctgggtggtgttcccaacctgcccgag
gacttccctgtgaggaacagagactttgtgggctgcatgaggaacctgagcatcgacagc
aaacccaccgacatggccagcttcatcgctaacaacggaaccactgcaggttgtcctgcc
aagatcaatttctgtactaaggatttgtgtcagaacggaggagtgtgtgtcaacaagtgg
aacacctacagctgtgactgtcctctgggctacgggggcaagaactgcgaacaagtgatg
ccgtccccgcagcactttgacggccaggccctggtgtcgtggagtgacctcgacgtcacc
atcgctgtgccctggtacatgggcctgatgttccggacgaggcaaggcactggcacactg
atgcaggctaacgctggagacttctctactatcaatttactgataagtgatcagtacgtg
aggtttgaggtgtttctgggatctgagcgggtagcggtgctgggcttccctcaagtccgg
gtgaacgatggggagtggcaccatgtccttgtggagctgaagagcgtcaaagacggcaag
gacatcaaatacatggccctggtgtcactggactacgggctgtacgagaggtctgtggag
ataggtaacgagctgccaggtctgaggctgagggctctgtatctgggaggattaccagga
gaggggaaccacgtccacgatggcttcaccggatgcatacagggtgcgcgcatgggtgag
acatccaccaacgtggtcaacgtgaacatgctgcagggctttaagattcgcgtagaggac
ggctgtgacctggctgacccctgtgactctaacatctgccctgagaacagccactgcagc
gacgactggagcacacacacctgcgtctgtgacccaggttactttgggagggagtgcgtt
gacgcgtgtcacctcaacccctgcgagcacgtgtccacctgcgtccgcaagcctagctcc
tcccatggctacacctgcgagtgtggacagaactactacggacagtactgcgaaaacaag
gttgagaagccgtgtcctcggggctggtgggggaaccccatgtgtggcccttgcaactgt
gacatcagcaaaggattcaaccctgactgtaacaagaccagtggagagtgtcggtgcaag
gataactactaccggcccaaggatgaggacacctgttacccctgtgagtgcttccctcta
ggggcccactcccgtacctgtgacacacacaccggacagtgcccctgtaaggccggggtc
attgggcaacagtgtaaccgctgtgacaaccccttcgccgaggtcaccgccaccggttgc
gaagtggtgtacgagggctgtcccaaggcctttgatcaagggatctggtggcctaagacc
aagtttggccgtcctgctgccatgaactgtcccaaaggatctatcggaactgctatccgc
cactgcaatgatgaaaagggctggctgcctcctgaactcttcaactgtaccacagtctcc
ttctcccagctcatgaagatgaatgaggagatgcatcgtaacgagtcccggatggatggc
gagcgctccaaagcgatcgtccgcctgctccacaacgcaaccaaccacacggacagttac
tacggcaacgatgtgaagacagcgtttcagctgctgaccagggtcctccagtacgagagt
cagcagacaggcttcgatctcaccgccacgagggacgcagagttcaacgagaacctggtg
agagcgggcagtgccatcctagaccctggcaccagagaccactgggagcagatccagcgc
tctgaggggggaaccgcccacctgctgcgccactttgaggattacaccaacaccctggca
cggaacatgaggaagacctacctcataccattcaccatcgtcactgacaatatgatcatt
gtcgttgattacctggacgcgtctgtccctgggcaggcctcattccctcgcttccatgag
atccaggagtactaccccaaagacctcacgtcctctgtccatttcccacagttcaacact
aggccccaggaggtccccaaccaagtagtcgaacccagccccagcgccgagccctctaag
accgacgcccctgaagagtatcataccctatccaataagagacgccgccatgtcgagccc
gccgtccccctgcctgttgccgtggtgatagtgttcaggtcgttgggtcagctcctccct
gagagatacgacccggaccgtaggagcctcaggctgcccaaccgtccagtgatcaacacc
cccatagtgagcacgttggtgtacagtgagggttcgcccctcccctctccccttgacccc
cccgtcacactggagtacacactactggagacagaggagaggaccaaacctgtgtgtgtg
ttctggaatcactccatcgcgattggtggcacgggaggctggtcgtctaagggatgtgag
ctgctgaacaggaacaacacacacatcagctgtcagtgtgaccacatgagcagcttcgct
gtgctcatggacatctccaagagagagcatggtgacgtgttacccctaaaaattgtgacc
tacaccacggtgtcagcctccctggtagccctgctcctcaccttcatcctgctggctcta
ctcaggaagctacgctctaacctccacagcatccacaggaacctggtggccgcactcttc
ttctccgagctcgtcttcctcatcggcatcaaccagactgacaacccgtttgtgtgtacg
gtgatcgccatcctgctccactacttctacatgtgtacgtttgcctggatgtttgtggag
ggcctccacatctaccgcatgctgacggaggtccggaacatcaaccacggtcacatgagg
ttctactacgccatgggctggggcatacctgcaatcatcacaggtctggcagtgggtctt
gaccctcagggctatgggaacccagacttctgctggctctctgtccacgacaccctcatc
tggagcttcgcaggacccatctctgtagtcgtcctggtcaacattgtcatctttgtactg
gcagctaaggcatcctgtggacgcaggcagaggtccttcgagaagtctggagccattcct
gctctgaggacagccttcctcctcctattgctcatcagcgccacctggctgttgggcctc
atggcagtcaacagtgatgtcatgaccttccactacctgttcgccatcttcagttgtctg
cagggcatcttcatcttcttcttccatgtgatctttaataaagaagtgaggaagaatctg
aagaatgtctttaccgggaagaaggctttaccggatgagtccagcactaccagagcatct
ctactgactcggtctctgaactgtaacaacacgtacactgaggacggtcctctgtacagg
tcagccattggggagtccactgtttctctggagagtgccgtcaggtcagccaaaagccac
agcagctacctcgcttacacactcaggggtgactctggtcagaagcctagtgtgtcgtcg
gccacagcgaaagcaggacacactgacctggacggatctctgttccacaggaacggcacg
aaaggaggagacgactcggactcggatagtgagttgtctgtagatgagcacagctcgtcc
tatgcctcgtctcactcttccgacagcgaagatgatgacatggacatcaagcccaagtgg
aacaacgagagacagcctctacacagcacacctaaagggaccagcattgcaaccaaagtg
gaagcagtgtccaatcacgtgaagccttactggcccaaggaggcgacaacagccagtgac
agcgaggatcctgggggtgcagaacggctgagggtggagaccaaggtgaacgtggagctg
caccaggagaacaaactcaaccatgtaggagagagaggagagacaccgcaggacagggag
acccccactagggagaatggacctcccagtctaccctccaatggaccctccaatggacct
ccaagcctacccaacagcacccatcaaccggagccgaagaagggcatcctgaagaacaag
atcacgtaccctcctcccttgaccgacaagaacatgaagaaccgactgagagagaagctg
agtgactacaaccctcccaccatctcttcctccatccctccacccatcatccctccgtcc
aagaccccctccgtggcctccaacgacggggtacaccccgtatctgtgggcaagagcaac
agtgtagtcatcaagccgccgattgccccacggccacaattaccacagaacgggggcgtg
gctatgagcatgaaggcgataacgaccaacggaggcaacgaatcagactcagagaaaacc
agagtctctctgcccttatga
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integrated database retrieval system
