KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139378777
Entry
139378777         CDS       T10872                                 
Name
(RefSeq) lysine-specific demethylase 5A-like isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ocla01009]
    139378777
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ocla03036]
    139378777
Enzymes [BR:ocla01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     139378777
Protein phosphatases and associated proteins [BR:ocla01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     139378777
Chromosome and associated proteins [BR:ocla03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    139378777
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID PHD zf-C5HC2 JmjN PHD_5
Other DBs
NCBI-GeneID: 139378777
NCBI-ProteinID: XP_070977370
LinkDB
Position
21:complement(23753394..23832089)
AA seq 1790 aa
MSLTDVNTIDFKHKYYWLFKENIICDFIMSDFAEFVPPPECPVFEPSWEDFTDPLGFINK
IRPIAERTGICKIRPPEDWTPPFACDVRNFRFTPRVQRLNELEALTRVKLNFLDQIAKFW
ELQGSRLRFPHVERKILDLYQLSKIVSSEGGFETVCKEKRWSKVGSRMGFPPGKGMGSLL
RSHFERILYPYELFQSGATLTGIHHLYEEGDDEEVQDEGMGEEEDEDEEDRERDSLSDGT
QNKDCMLPERSSRRLKSEVGDERENKEPKTMQIFGSGPKMVGLEIVPADDGFNKKQRHLK
AQAFAIKMRPRKETLEVNFIPQIDLYMCLMCGRGDEEDRLLLCDGCDDSYHTFCLIPPLQ
DVPKGDWRCPKCVAEECSKPREAFGFEQAVREYTLQSFGEMADHFKSDYFNMPVHMVPTE
LVEKEFWRLVSSIEEDVIVEYGADISSKEVGSGFPVRDGKRRLLGDEEEYANSGWNLNNM
PVLEQSVLTHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINFLHWGEPKTWYGVPA
HAAEQLESVMKKLAPELFDSQPDLLHQLVTIMNPNILMEHGVPVFRTNQCAGEFVVTFPR
AYHSGFNQGYNFAEAVNFCTADWLPMGRQCVAHYRRLHRYCVFSHEELLCKMAADPESLD
VELAAAVFREMGEMMEEETRLRQALQEMGVLSSEQEVFELVPDDERQCQKCKTTCFLSAL
TCPCSPEHLVCLHHAKELCDCPLGIKCLRYRYDLEEFPSMLYGVKSRAQSYDTWAKRVTD
ALAADHKNKKDLIELKVLLEDAEDRKYPENSLFRRLREMVKEAETCSSVAQVLLSRKQRH
STRQHPESSRTRNKLTVEELKVFVELLFKLPCVIGQARQVKELLENVEDFHERAQVALAD
ELPDSSKLQALLDLGGGLDVELPELPRLKQELQQARWLDEVRVTLAEPHRVTLELMKRLI
DSGVGLAPHHAVEKAMAELQEILTVSERWEDKACACLQARPRHSMLTLESIMIEARNIPA
YLPNVLALREALHKAKEWSAKVDAIQVVSRHTCGSNYAYLEQLESLLARGRSIPVRLDPL
PQVESQVASARAWRERTARTFLKKNSTYTLLQVLSPHVDIGIYGNSKSKRRRVKELLEKE
RGLDLEGLGDLDESYEDACDPAIVVAAFKSKEQKEVEAIHSLRAANLAKMAMSDRIEEVK
FCLCRKTASGFMLQCELCKDWFHGACVPLPKAGSQKKLMVSAGSQGNSKEAKFLCPLCQR
SRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMGWQDRARQALATNELSSALAKLS
VLSQKMVEQAAREKTEKIINAELQKAAANPDLQGHIQTFQQAGFSRAASPRQSVDYDDEE
TDSDEDIRETYGYDMKDPGEVKPYLFCDEEIPVKSEEVVSHMWPTTPSFCAEHAYSSASK
SCPQNQSTPRKQPRKTPLVPRSLEPPVLELSPPAKTQLEELMLVGDLLEVSLDETQHIWR
ILEATHPPSEERFLQVMEHEDSQFEKIKMKIKMKDSEKKRKRKLERAEHQLLMAAVSGVG
DMMRSPKSSKDPKLSLLDPLGKPKKKKKLKLNPDKNRELKQLAKRLAKEDKERKRKDKAV
VKSEAVREGLEKRKEKKILDIPSKYDWSGAEDSNDENAVCASKNCVRPCKDKVDWVQCDG
GCDEWFHQVCVGVTCEMAENEDYICIDCTCKSSILSRGVVGSLGRSMGIGGGGVTAVVKL
ERVCEEPVVLEAPVYSGLSQIIMPPSQTQMMPPSTSLPQQQQQPDTRESS
NT seq 5373 nt   +upstreamnt  +downstreamnt
atgtcactcacagatgtcaacacaatagattttaaacacaagtactattggctttttaaa
gaaaatataatttgtgatttcatcatgtctgattttgctgaattcgtaccccctcccgag
tgcccagtttttgagccgagttgggaagattttacggatccactaggatttataaacaag
attcgacctattgcagagagaactggcatctgcaaaattcgaccgccagaggactggaca
cctccttttgcctgcgacgtacgcaacttccgctttactcctagagtccagagactcaat
gaattggaggccctcactcgggtcaagctcaacttcctggatcagattgccaagttctgg
gaactgcaggggtccaggctgcgcttccctcatgtggagaggaagatcctcgatctgtac
cagctcagcaagattgtctcctccgagggaggctttgagaccgtgtgtaaggagaagaga
tggtccaaggtgggcagcaggatgggtttccccccagggaagggtatgggctctctgctg
cggtcccacttcgagaggatcctctacccctatgagctcttccagtctggagccacgctc
actggtatccaccatctgtacgaggagggagatgacgaagaggtgcaggacgagggcatg
ggggaagaggaagacgaggacgaagaggaccgagagagggacagcctgagtgacgggact
cagaacaaggactgcatgctccctgagcgaagctcccgccgcctgaagtccgaggtcggt
gatgagcgggaaaacaaagagcccaagaccatgcagatctttggcagtggtcccaagatg
gttggtttagagattgtaccggctgacgatgggttcaataagaagcagcgtcacctgaag
gcccaggccttcgccattaagatgcgaccacgcaaagaaaccctggaggtcaactttatt
ccccagattgacctgtacatgtgcctgatgtgtgggcggggtgacgaggaggaccgcctc
ctgctgtgtgacggctgtgatgacagctaccacaccttctgtctgattccgcccctgcag
gatgtccctaagggggactggcgatgccccaaatgtgttgctgaggagtgcagtaagccg
cgggaggcgtttggctttgagcaagccgtgagggagtacaccctgcagagctttggagag
atggctgaccacttcaagtcagactacttcaacatgcctgtgcacatggtgcctacagag
ctagtggagaaggagttctggcgtctggtgagctccatcgaggaggatgtcattgtggag
tacggagctgacatcagctctaaggaggtgggcagcggcttccccgttagggatggcaag
agacggctactgggagacgaagaggagtatgccaattcaggctggaacctgaataacatg
ccagtcctggagcagtcggtccttacccacataaacgtggatatctctggcatgaaggtg
ccctggctctatgtgggcatgtgcttctcctccttctgctggcacatcgaggaccactgg
agctactccatcaacttcctgcactggggggagcctaagacgtggtatggtgtcccggcc
cacgcggcagagcagctggagtcagtgatgaagaagctggccccagagctgtttgactct
cagcctgacctgttgcaccagcttgtcaccatcatgaatcccaacatcctcatggagcat
ggagtgcccgttttccgcaccaaccagtgtgcgggggagtttgtggtgacctttcccaga
gcctaccacagtggcttcaaccagggatacaactttgctgaagctgtcaacttctgtacc
gcagactggctcccgatgggtcgtcagtgtgtggcccactaccggcggctccaccgctac
tgtgtcttctcccacgaggagctgctgtgcaagatggctgccgaccccgagagcctggat
gtggagctggctgctgcagtcttcagagagatgggagagatgatggaggaagagacacgg
ctcagacaggccttgcaggagatgggtgtgctgtcctcggagcaggaggtgtttgagctg
gtccctgatgacgaacggcagtgtcagaagtgtaagaccacctgtttcctgtcagctctg
acgtgtccctgcagcccagagcatctcgtctgtctgcaccacgccaaggagctatgtgac
tgtcccctgggaatcaagtgtctacgctaccggtatgatctggaggagtttccctccatg
ctgtatggggtgaagtccagagcccagtcctatgacacctgggccaagcgggtcactgat
gccttggctgctgaccacaagaacaagaaagacctgatagagttgaaggttcttctggag
gatgcagaggacaggaagtatccagagaacagtctgttccgtcggctcagagagatggtg
aaggaggccgaaacctgctcttctgtggcccaggtactgctcagccgcaagcagagacac
agtaccaggcagcatccagagagcagcaggactcgtaacaagctgacagtggaggagctg
aaagtctttgtagagctgctgttcaaactgccctgtgtcattggacaggctcgacaggtc
aaagagttactagagaacgtggaggacttccatgagagagcccaggtagccctggctgac
gagctgcctgactcctccaagctgcaggccctgctagacctgggtggaggtctggatgtg
gaactacctgagctgcccaggctcaaacaggagctgcagcaggcccgctggctggatgag
gtgcgtgtgacgttggcagagccccaccgggtgaccctggagttgatgaagcggctgata
gactctggggtggggctggcaccacaccatgctgtggagaaggccatggctgagttgcag
gagatactcactgtgtcagagagatgggaggacaaggcctgcgcatgcctacaggccagg
cctcggcacagcatgctaaccctggagagcatcatgatagaggccaggaacataccagcc
tacctgcccaacgtcctggccctccgagaggctctgcacaaggccaaggagtggagtgcc
aaggtggatgccattcaggtagtgtcgcgtcacacgtgtggcagtaactatgcatacctg
gagcagctggagagcctgctggcgaggggtcgctccatccccgtccggctggaccccctg
ccccaggtcgaatcccaggtggcctcagcccgcgcctggagggagaggactgcacgcacc
ttcctcaagaagaactcaacctacaccctgctacaggtccttagtccgcatgtagatatt
ggtatctacggcaacagcaagagcaaacgcagacgagtcaaggagctccttgagaaggag
aggggtctggacctggagggtctcggcgaccttgacgagagttatgaagatgcctgtgac
ccggccatcgtcgtagcggcattcaaatccaaggagcagaaagaagttgaggccatccac
tccctccgagctgccaacctggctaagatggccatgtctgaccgcatcgaggaggtcaag
ttctgtctgtgtcgtaaaactgccagtgggtttatgttgcagtgtgaactgtgcaaggac
tggttccacggagcctgcgtgccattaccgaaagcgggctcacagaagaagctcatggtc
tcggccgggagccaaggcaacagcaaggaggccaaattcctgtgcccgttatgccagcgg
tcacgtcgcccgcgtctggagaccatcctgtctctcctggtgtccctccagaagctgccg
gtgcgtctgcctgaaggggaggccctacagtgcctgacggagagggccatgggctggcag
gaccgcgccaggcaggccctggctacaaacgagctgtcctcggccctggccaagctgtcg
gtgctcagtcagaagatggtagaacaggctgcccgggagaagaccgagaagatcatcaac
gccgagctgcagaaggcagccgcaaaccctgacctgcagggtcacatccagacgttccag
caggcagggttcagcagggcagcgtcgccacgccagtctgtcgactacgatgacgaggag
acggactctgacgaggacatcagggaaacatatggctacgacatgaaggacccaggtgaa
gtgaagccgtacctgttttgtgatgaggagatccctgtcaagtcagaggaagtagtcagt
cacatgtggcccaccaccccctctttctgcgctgaacacgcctactcctctgcatccaag
tcctgccctcagaaccagagtacccccaggaagcagcccaggaagacgcccctggtgcct
cgctccctggagccccctgtgctggagctgtcccccccggccaagacccagttagaggag
ctgatgctggtgggggacctgctggaggtgtccctggacgagacccagcacatctggagg
atcctggaggccacacaccctccctctgaggagaggttcctacaggtcatggagcatgag
gattctcagtttgagaagatcaagatgaagatcaagatgaaggactctgagaagaagagg
aagaggaagctggagagggcggagcaccagcttctcatggcagctgtctccggggtcgga
gacatgatgcggtcccccaagtcctcaaaggatccgaaactgagcctcttagacccgctg
gggaaacccaagaagaagaagaagctgaagctgaatccggataagaaccgtgaactgaaa
cagctggcgaagcgcctggctaaagaggataaggagaggaagaggaaggataaagctgtg
gtcaagtctgaggctgtcagggaggggctggagaagaggaaagagaagaagatcctggat
ataccgtcgaaatatgactggtctggagctgaggactccaatgatgagaacgctgtctgt
gcgtccaagaactgtgtgagaccctgcaaggacaaggtggactgggttcagtgcgacggc
ggctgtgacgagtggttccaccaggtgtgtgtgggtgtgacctgcgagatggccgagaac
gaggactacatctgcatcgactgcacctgcaagtcgtctatcttgagtcggggtgtagtt
ggaagtttgggcagaagcatgggcataggaggaggaggggtgactgcagtggtgaagttg
gagcgtgtttgtgaggagccggtggtgctggaagcaccagtctacagcgggctgagccag
atcattatgcccccctcccagacccaaatgatgcccccctctacctccctcccccagcaa
cagcagcagccggatactcgggagagcagctag

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