Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139378841
Help
Entry
139378841 CDS
T10872
Name
(RefSeq) dynactin subunit 1-like isoform X1
KO
K04648
dynactin 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04814
Motor proteins
ocla05132
Salmonella infection
Brite
Membrane trafficking [BR:
ocla04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
139378841
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
139378841
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
139378841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139378841
NCBI-ProteinID:
XP_070977483
LinkDB
All DBs
Position
21:29428892..29457098
Genome browser
AA seq
1281 aa
AA seq
DB search
MAGMRRRHSVAVPAMGLGIGRGSLLFSSPLLSKMSADGGGKPAKVGSVVEVIGKGQRGTV
AYVGATLFATGKWVGVILDEPKGKNDGTVQGKRYFQCDENCGIFVRQSQIQLVEDGSSAT
SPDTPEAATAKFLPKQKDIPETPKSVKQMPIPKKTPRVLATPASGLSSSLSREDVSEGSL
SSKGALGAPVVPLPSGTPTTPGAPPPATSSKAEPPVAKQEEESLRGQVKDLEEKLETLKM
KRAEDKVKLKELEKYKIQLEQLQEWKTKMQEQQADLQKQLKEAKKDAREALESKDRYMEE
MSDTADAIEMATLDKEMAEERSESLQVEVESLKEKVEELTMDLEIIKHEVEEKGSDGAAS
SYHVKQLEEQNSRLKEALVRMRDLSSSEKQEHVKLQKQMEKKNGELETLRTQKEKLQEEM
KQAEATIDELKEQVDAALGAEEMVETLTERNLDLEEKVRELRETVTDLEAINEMNDELQE
NSRETEMELREQLDLNGARVREAQKRVEAAQETVADYQQTINKYRELTTSLQDTNRELTI
AQNANAEQVQQPPAELFDFKIKFAETKAYAKAIEMELRKMEVGQANRQVSLLTSFMPDSF
LRHGGDHDCILVLLLIPRLICKAELISKQAQEKFDLNGNPVERTGMKMRGPPGEQLSFAS
GLVYSLTLLQATLHKYEQSLNCCSVEVYKRMGTLYSEMSVHERSLDFFIDLLHKDQLDET
VHVEPLTKAIKYYQQLYSIHLADQTEDCTVQLADHIKFIQSALDCMGAEVVRLRAFLQPG
QEGADLNILLKDLDTSCSDIKQFCKKIRRRMPGTDVPGVPAALAFGAPVSETLTDCRRQL
TRVVAVLQEVAAAGAQMVAPLGEQEGLNTLKLEDVAFKAVEQVYGSHGLNPHECLRQSCS
SVISTMNKMATAMQEGEYDAERPQGKTPPVEARAVALRAEITDAEGLGVKLEDRDTVIKE
LKKSLKIKGEELSEAHVRLSLLEKKLDTSTKDADERVEKIQTKLDETLALLKKKEKEFEE
TMDALQADIDQLEAEKAELKQRLSNQSKVTIEGLRAPPASGIASIVSGTAGAGVAPGAGG
LSGPMQVVDSPLLRQQVETQRLGIKHLKNENNRLKAEKMRAQLASLPPLHVPKLPLREAS
TSPPAEGPLHGALYRKTDQLLGTLLKMSAAVKVVDITGKTPVSASAQLLDQTARLQSLSD
ALDKLKGEVSEHVVSQQPGAKVSSDFATFPISSFVKAKEEKQGGTVFIGRVAIPCAKGQE
QVHRLVLSQQHLQQVHRLLMT
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggctggaatgcgcaggcggcattctgtggccgtcccggcgatgggcctgggtattggc
cggggcagcttgctcttcagcagccccctcctgagcaagatgagtgcagacgggggcggc
aagcctgccaaggtgggctcggtggtggaggttatcggtaagggtcagcgtggcacggtg
gcttacgtgggcgccacgctcttcgccactggtaagtgggtgggcgtgatcctggacgag
cccaagggcaagaacgacggcacggtccaggggaagagatactttcagtgtgatgagaac
tgtggtatcttcgtgcgccagtcccagatccagctagtggaagatggatccagtgccacc
tctccagacaccccagaggcggccactgccaagttcctgcccaagcagaaagacattcct
gagactccgaaatcagtcaaacagatgcccattcccaagaagaccccccgagtcttagcc
accccggcctctggtctgtccagctctctttccagggaggatgtcagtgagggcagcctg
tcttccaagggtgcactgggggctcccgttgtccccctgcccagcggcacccccaccacg
cccggtgctcctccccctgccacctctagcaaggctgagcctcccgtagcgaagcaggag
gaggagtctctgcgaggtcaggtgaaggatctagaggagaagctggagaccctgaagatg
aagcgggcagaggacaaggtcaagctgaaggagctggagaagtacaagatccagctggag
cagctgcaggaatggaagaccaagatgcaggagcagcaggccgacctgcagaaacaactc
aaggaggccaagaaggatgctcgggaggccctggagtctaaggaccgctacatggaggag
atgtcagacacggcggacgccatcgagatggccacactggacaaggagatggccgaggag
cggtcggagagcttgcaggtggaggtggagtcactgaaggagaaggtggaggagctcacc
atggacctggagatcatcaaacacgaggtcgaggagaaaggttctgatggagctgcctcc
agttaccatgtcaagcagctggaggagcagaacagcagactgaaagaggctctggtcagg
atgcgtgacctgtcttcctctgagaagcaggagcatgtgaagctccagaagcagatggag
aagaagaatggagagctggagactctgaggacccagaaggagaagctacaggaggagatg
aagcaggctgaggccaccattgatgagctgaaggagcaggttgatgctgctctcggggca
gaggagatggtggagactctgactgagaggaatctggacctggaggagaaagtacgagag
ctcagagagactgtcacagacctggaagcgatcaacgagatgaatgacgagctgcaggag
aacagcagggagacggagatggagctgagggagcagctggacctgaacggggctagggtg
agagaggcccagaagagggtggaggccgctcaggagacggtggctgactatcagcagacc
atcaacaagtatcgcgagctcaccaccagcctacaggataccaacagggagctgaccatt
gctcagaatgccaatgcagaacaggtccaacagcctcctgctgagctgtttgacttcaag
atcaagtttgctgagaccaaagcctacgccaaggccatcgagatggagctgagaaagatg
gaggtgggccaggccaacagacaggtgtctctcctcacctccttcatgcccgactccttc
ctgcgtcatggaggagaccacgactgtattctggtgctcttgctcataccaagactcatt
tgcaaggctgagttgatcagcaagcaggcccaagagaagtttgatctgaatggtaaccca
gtggagaggactgggatgaagatgagaggaccacctggagaacaactcagctttgcctct
ggactggtgtattctctaaccctgctacaggccacgctgcacaaatatgaacaatctctg
aactgctgcagtgtggaggtgtataagcggatggggactctctactcagagatgagtgtc
catgagcgttccctagacttctttatagacctgctgcacaaagaccagctggatgagact
gtacacgtggagcctctcaccaaggccatcaagtactaccagcaactgtacagcatccac
ctggctgatcagactgaagattgcactgtgcagctggctgatcacatcaagttcatccag
agtgcattggactgtatgggtgcagaggtggtgcgtctcagggccttcctgcagccggga
caagagggggctgacctgaacatcctgctgaaggacctagacacatcctgcagcgacatc
aaacagttctgcaagaagatcagacgcaggatgccagggaccgacgtgccaggggtgccc
gccgctctggcctttggcgcaccggtgtcagagactctaacggactgcaggcgtcagctg
actcgggtggttgccgtgctacaggaggtagctgcggcgggggcgcagatggtcgcccct
ctaggagaacaggaggggctcaacaccctcaaactggaggacgtggccttcaaggctgtt
gaacaggtgtatgggtcccatggcctgaatccccatgagtgtctgcgtcagtcctgcagc
tctgtcatctccaccatgaacaagatggctaccgccatgcaggagggagagtatgacgcc
gagcgaccacagggaaagactcccccggtagaggctcgtgcagtggccctcagggcagag
atcactgacgcagagggtctgggagtcaaactggaggacagagacactgtcatcaaggag
ctcaagaagtccctgaagatcaaaggagaggagttgagtgaggcccacgtccgtctcagc
ctgctagagaagaagctggatacgtccactaaagatgcagacgaacgtgtggagaagatc
cagaccaaactggatgagaccctcgccctgctcaagaagaaagagaaggagtttgaggaa
accatggatgccctgcaggcagacatcgaccagctggaggcagagaaagcagagctgaag
cagcgtctctccaaccagtcaaaggtgaccattgagggcctcagggccccgcctgcctct
ggcatcgcatccatcgtctcaggaaccgccggagcgggtgttgcccccggagcagggggc
ctgtctgggccgatgcaggtggtggactcccctctcctccgtcagcaggtggagacccag
agactgggcatcaaacacctgaagaatgagaacaacagactgaaggcagagaagatgaga
gcccagttagcctccctccctcccctccacgtccccaagcttcctctgagagaggcctcc
acctctccccctgctgaggggcctctccacggggctctctacaggaagacagaccagctc
ctggggaccctgctcaagatgagtgccgccgttaaggtggtcgacatcaccgggaagact
ccagtgagtgcgagtgctcagctcctggaccagacagctcgactgcagtctctgagtgac
gctctggacaaactgaagggtgaagtgtcagagcatgtggtttctcagcagcctggggcg
aaggtctcctctgactttgccaccttcccaatttcctccttcgtcaaggccaaggaggag
aagcaggggggtacggtgttcatagggcgcgtggccatcccatgtgccaagggccaggag
caggtgcaccgtcttgtcctatcacagcagcacctgcagcaagtgcaccgcctcctcatg
acctaa
DBGET
integrated database retrieval system
