Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139378843
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Entry
139378843 CDS
T10872
Name
(RefSeq) protein fantom
KO
K16550
protein fantom
Organism
ocla
Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocla01009
]
139378843
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139378843
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139378843
Cilium and associated proteins [BR:
ocla03037
]
Primary cilia and associated proteins
MKS complex
139378843
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPGR1_C
C2-C2_1
Motif
Other DBs
NCBI-GeneID:
139378843
NCBI-ProteinID:
XP_070977491
LinkDB
All DBs
Position
21:complement(29476775..29488217)
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AA seq
1446 aa
AA seq
DB search
MSLTVDETAGDLPVRDVGLMRGGLMPTVPDSVRDGRSWKKPQVLKLKDRQRVFQVPREQL
EDQCFRLQEENNLLRQHTRTQEQRLRRMSTKLMRLREGRPGEAGTRVREGDMEDMIQELE
ARVATLESQKGALQSKLSMARQHIMDLGPGRSYHRLRGRGLDGQGGVTRAAQTAPPHYGL
SLEDTRGEIEKFRSSVIETQKVRVTELEQAAQSLRDTLGEKEREIEDSMKEMRRQQANGH
RITIKDNVDVIRLQKHLSDKSAALRVSQEKFNVLQEAYEAQLEEGQRSLKESQGALLEKV
EELSEQLKQERQRALTLEGQLTAATLSMQALEEFQERVSDLEGEKNLLKDSYDTLLESTL
SAHSHVEEKVDRERELEKDREREKEEIWRMDIKRLEEILRVEREERGRLEEEKERLQLDK
ERIEEQQERERESVESIRGKHDRMEQEVLQYRQEVTSLQERLDSVTKEFDMSVEDLSETL
IQIKTFRLQQEGREGLRFLGIDGKVEDSSRELRDLQASQAETVLELQKTRDLLLLQHRIN
NDLQAELNTRIERAEIEREETKRRVAEKDKLLGRRALQINTLQAQLKELAYSPRNYKRSI
PLQYTWPGWDQEVVQPIEDDTTFSQLRAGESLLEIHLRGAAFTPGGLRTMGGAGKGAGSK
DEAVVTFCTYALLDFEMHSTPLVSGGQPNYGFTSKYPLSARDLGRLGGQGGGVLVELHQA
LGGVRFVTRGGAQVPLVGAVERRGEQVSGRVNIAGSEGDVIGILDFWVRLFPPSEPVDTL
IERGVDRMTERGADRRIERGAGRMTERGADRWIERGADRMTDRLMDRRTISPQRQWSPIW
AQRGLGLEDSVREQELFDYGRGIPNELEVVLEHCVGLSARWPELLPDSYLMYRLYDLPPH
ASPTIPCSADPLFNDTVSYPLAVTTDVLEYLRGCSLWVYVFDDNDDQTPPAYLAKTPIPL
RPLAAGRPIRGDYVLRDTGGGRRGMVRVFIRWIYPFQPPEGSTQRHKEMDRMERAMERRS
ERAEELPRPIAKPRVKSKAVEPRVDRPAAHKETSIQPKPRPPPIKLRLPQPNAQSERATP
VTSPEPSVATPLQSPARKRATPLRSPATLLTPGTSQATPSQSPTRKQATPLRLPKVRGQS
SPVSELTPSRPDSARSTRSSASDDKSYFKDAPSLEQVSMEEEEEEEEQEEKSDEAQVDSE
VMESRESRTSNRSDVLIIPPSSRRIRKGDKLRVEILSLSFEPTSRVALDESVQRVYVEYR
LLGVPMETTETPMSLRKPSEGEEIHYNFTRVIYVDGSEAAPLRQYLYTMLEGTDPNQGRL
KFTVVNEPMDDDDDEECTDVGHAFLDLQELLLTGNDITERQIDIVSVDVEKEVMGKLKVS
LEAAKTLTGIYWDYRQKRDQETKKDEENDEKEEDKEQEEEEKETLKKEDKIQVIDYDIDD
DDSDFY
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgacagtggacgagacagccggagatctaccagtgagggacgtagggctgatg
agaggagggctgatgcccaccgtaccagactctgtgagagacggaaggtcatggaagaaa
ccacaggtgctcaagttaaaagaccgtcagagggtgttccaggtgcccagggagcagctg
gaggaccagtgtttccgtctgcaagaggagaacaacctactgagacagcacacacgcaca
caggaacagaggctacgccggatgtccaccaagttgatgcgtctaagggaggggcgtccg
ggtgaggccggtaccagggtcagggagggggacatggaggacatgatccaggagctggag
gcgcgtgtggccaccttggagagccagaagggggcactgcagagcaaactcagcatggcc
aggcagcacatcatggacctggggcctggacggagttaccacagactcagagggcgggga
ctggatgggcagggaggagtcacacgagcagcacagacagctccgccccactacggcctc
agcctggaggacaccagaggagagatagagaaattcaggtccagtgtgatcgagacccag
aaggtgagggtgacagagctggagcaggctgcccagtccctgagagacacacttggggag
aaggagagagagatagaggacagtatgaaagagatgaggagacaacaggccaacggacac
aggatcactataaaggacaatgtggacgtgatccgcctgcagaagcatctgtcagacaag
agcgctgccctgcgtgtcagccaggagaagttcaacgtgttgcaagaggcttatgaagct
caattggaagagggtcagaggtcactgaaggagagccagggggcattgctggagaaggta
gaggagctgagtgaacagctgaaacaagagagacagagagcgctgacactggagggacag
ctcaccgctgccactctttccatgcaagccctcgaggagttccaagagagagtgtcagac
ctggaaggagagaagaatctactgaaggacagctatgatacactcctggagagcacttta
tctgcccacagtcatgtggaggagaaggtggatagagagagagagctggaaaaagatcgg
gagagagagaaagaggagatctggaggatggacataaaacggcttgaggagattctgcga
gtggagagggaggaacgagggaggctggaagaggagaaagaaaggttgcaactggacaaa
gagaggatagaggaacaacaggagagggagagagagtccgttgagtcgattagaggaaaa
catgatcgaatggaacaggaagttctacagtacagacaggaagtgacatcactgcaggag
agactggactcagtcacaaaggagtttgacatgagtgttgaggacctcagtgaaaccttg
atacagattaagacatttaggttacagcaggagggccgtgagggtctgcggttcctcggg
attgatgggaaggtggaggactcatcgagagagctgagggacctccaggcatcccaagca
gagactgtgttagaattacagaagaccagagacttactgttactgcagcaccgcatcaat
aatgatttgcaggctgagttgaacacaaggatagagagagcagaaatagagagggaggag
accaagaggagggtagcggagaaggataaactacttggaagaagagccttgcaaatcaac
actttacaagcgcagctgaaggagttagcctacagccctaggaactacaaacggagcata
ccactacagtacacctggccggggtgggaccaggaagtggtacagcccattgaagacgac
accactttctctcaactacgagcgggggagtcccttttggagatccacctcaggggggca
gctttcacccctggggggctacggaccatggggggtgccgggaaaggggcggggtcaaaa
gatgaagcggtcgtgaccttttgcacttacgccctcctggactttgaaatgcactccaca
cccctggtttcgggagggcagcccaactacgggttcacatcgaagtaccccctctctgcc
cgtgatttggggaggctggggggtcaggggggaggggtgctggtggagctgcaccaggca
ttgggaggggtgcgttttgtgacccgggggggggcgcaggtgccactggttggagcggta
gagaggagaggggagcaggtgagcggacgagtcaacatcgcaggctcggagggagatgtc
atagggatcctggacttctgggtgcgtctcttccctccttcggagcccgtggacacactg
atagagagaggagtggacagaatgacagagagaggagcagacagacggatagagagagga
gcaggccgaatgacagagagaggagcagacagatggatagagagaggagcagacaggatg
acagacagactgatggacagaaggaccatcagtccacagagacagtggagccccatctgg
gcccagagaggtctaggcttggaggacagtgtgcgtgagcaggaactatttgactatggc
agaggtatacccaacgagctggaggtggtgctagagcattgcgtgggtctaagcgcccgc
tggccggaactacttccggactcctacctcatgtaccgtctctatgacctgccgcctcac
gcctcccccacaataccgtgcagcgccgacccactgttcaacgacacggtcagctaccct
ctggccgtgaccactgacgttctggagtacctaagagggtgcagtctctgggtctatgtg
ttcgatgacaatgatgatcagactccacctgcttacctggccaagacacccataccactc
cgcccgctggcagcaggacgacctatcagaggtgactatgttctgagggacacgggtggc
ggccggcgggggatggtccgcgtgttcatacgatggatttaccccttccaaccaccagag
ggcagcacccaaagacacaaggagatggacaggatggagagagcgatggagaggaggagc
gagagagcagaggaactgccgaggcctattgccaagcctagggtgaagtcaaaagctgtt
gagcccagagtggacagacctgctgcacataaagagaccagcattcagcccaagccccgt
cctccaccaatcaagctgcgattaccccaacccaacgcccaatcagagcgagccacacct
gtgacgtccccggaacccagtgtcgccacacccctccaatctccagcgagaaaacgggcc
acgcctcttagatcacctgccacactcttgacacctgggacgagtcaagccacgccctcc
cagtcgcccaccaggaagcaggcaacccctctgaggctacctaaggtcagaggtcagagt
tcgcctgtgtcagagttgaccccatctcgacctgactcggctcgttccaccaggagttcc
gccagcgatgataagagttattttaaggacgccccctcactggaacaggtgtctatggaa
gaggaggaagaggaggaggagcaggaggagaaaagtgacgaagcccaagtggatagtgag
gtcatggaatccagagaatcaaggacctccaaccgtagtgacgtcctcattattcctcca
tcttcaaggagaatcagaaagggagacaagttgagagtggagattctctctctctctttt
gagcccacctcccgagtggctctcgatgagtcagtgcagcgtgtctatgtggagtaccgc
ctcctgggagttcccatggaaaccacagagacacccatgtccctccgtaaaccatcggaa
ggggaggagatacattacaacttcacacgagtcatctatgtggatggctctgaggcagcc
ccactaagacagtacctgtacaccatgctggagggaactgacccgaaccagggcaggttg
aagttcacagtggtcaacgagccaatggatgatgacgatgacgaggagtgtaccgacgtt
ggccacgctttcctggacttacaggaactgctactaacaggaaatgacatcaccgagcgg
cagatcgacattgtcagtgtggatgtagagaaagaggtgatgggaaaactcaaagtctct
ctggaagcagcaaagactttgactgggatatactgggattatcgccagaagagagatcaa
gagaccaagaaggatgaagagaatgacgagaaggaggaagacaaggagcaagaggaggaa
gagaaggaaacattaaagaaagaagacaaaatacaagtgatagattatgacattgatgat
gatgacagtgacttttactaa
DBGET
integrated database retrieval system