Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139378941
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Entry
139378941 CDS
T10872
Name
(RefSeq) acetylcholine receptor subunit beta
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139378941
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139378941
Ion channels [BR:
ocla04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
139378941
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
139378941
NCBI-ProteinID:
XP_070977671
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Position
21:34255987..34281069
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AA seq
495 aa
AA seq
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MRALDLLLLLCCLCGLYAVGGASEGEKQLMKALFNNYNLKVRPTASPGAKVVVRIGMILS
SFVSLNMKAEEMSTIVIMNLEWTDHRLSWKPKDNDGIEVMRLPAGKVWLPDIVLINNNDG
VFDVALHVAVQAYSSGRVTWSPPALFCSSCGVKVTYFPFDWQNCTMVFKSYTYDSSEVDL
QHALDDQGNEIKEIQYDGGFSESGEWYIRHQPSRKNEIREDLYEDITFYLIIERKPLYYV
FNIIIPCILLTCIAIFNFYLPPDAGEKMGLSINVLLTLTVFLLLLADKVPETSLGVPIIV
NYLMFTMILVTVSVILSVVVLNLHHRSPSTHHMPMWVRKIFIHMLPPYLGMLRPKVEMPL
SLDQPPRREKNNMAISRAADEYFIRKPNTCFLFPKPNRYQSEGMCTDLRKFIDGPSHYLT
LPPELKTAIEAIIYIAEQLQAEKDFAALKEDWQYVAMVVDRMFLWIFVVFTTVGTLGIFA
DASFNHTPSDPFKYP
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgagggccctggacttgctcctgctgttatgttgcttgtgtggcctatacgcggtggga
ggtgcgtcggagggggagaagcagctgatgaaagccctgttcaacaactacaacctgaag
gttcgccctacggcctcacctggcgccaaggtggtggtccggattggcatgatcctctcc
tccttcgtcagcctgaacatgaaagcagaagagatgagcacaattgttatcatgaacctg
gagtggacagaccaccgtctctcctggaaacctaaagacaatgacgggatcgaggtgatg
cgacttcctgctgggaaggtctggctgcctgacatcgtcctcatcaacaataatgatggt
gtgtttgatgtggccctccatgtcgctgtccaggcctatagtagtgggagggtgacctgg
tctccccctgccctcttctgtagttcctgtggggtcaaggtgacgtactttccatttgac
tggcagaactgcaccatggtgttcaagtcttacacctacgactcatcagaggtggacctg
cagcacgctctggatgaccagggcaacgagatcaaagagatccaatacgacgggggcttc
agtgagagtggtgaatggtacatccgccaccagcccagcaggaagaatgagatccgtgag
gacctgtatgaagacatcaccttctacctgatcatcgagaggaagcctctctactatgtc
ttcaacatcatcatcccctgtatcctcctcacctgcatagccatcttcaacttctacctg
ccgcccgacgctggtgagaagatgggtctgtccatcaacgttctgctcaccctgactgtg
ttcctgctgctgctggctgacaaggtccccgagacctccctgggtgtccccatcattgtc
aactacctcatgttcaccatgatcctggtcaccgtctcagtcatcctcagtgtggtggtc
ctcaacctgcaccaccggtccccctccacacaccacatgcccatgtgggtccgcaagatc
ttcatccacatgctgcccccctacctgggcatgctgcggcccaaggtggagatgcccctc
tccctggaccagccccccaggagggagaagaacaatatggctatcagccgcgctgctgac
gagtatttcatacgcaagcccaacacctgcttcctcttccccaaacccaataggtaccag
tctgagggcatgtgtactgacctgaggaagttcattgacggacccagccactacctcact
ctgcctccggagctcaagactgccatcgaggccatcatctacatcgctgagcagctacag
gctgagaaggactttgctgctctgaaggaagactggcagtatgtagccatggtagtggat
cgcatgttcctgtggatctttgtggtcttcactactgtgggaaccctgggcatcttcgcc
gacgccagcttcaaccacacccccagcgacccctttaagtacccctaa
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