Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139378977
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Entry
139378977 CDS
T10872
Name
(RefSeq) thyroid receptor-interacting protein 6-like isoform X1
KO
K12792
thyroid receptor-interacting protein 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
139378977
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Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
139378977
NCBI-ProteinID:
XP_070977735
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Position
21:35771728..35785011
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AA seq
571 aa
AA seq
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MSGPTWPPPKTLGSPVRPVPRLSQSGPAVYRQLPMKVSSDTRPKYVVHDQNRGGGGMATR
YLATRSTAGPMQHHHQEDPGFHPKSNDHYYQPPPHRLKEDQSLNPHMDRYQLMHHSNIDA
EIDSLTCMLADLDSHPQNSAQLYDNVPYDKHISGDCYKPSAHPGEPSQGRQSMGFSPHPQ
SQSQYPPAPPYPSDPHQGLQYFPQPDYTNNQVSKRYPQPVPAPYTTASTPTGPRFSVQVK
TSQPVTNSQTGRQAEQAYTPPPHRQHALWPPSQNQTGPLGWYPPQPDSQAQELHSEKGYK
GSDAGSGGRATQCPMSNKGPETHQSGSGSAPSSAYQPSKQGTAALRPEEELDQLTKELVY
DMNHPPTEEYFGRCARCGDNVLGDGSGCIAMEQVFHVECFTCITCHTRLRGQPFYARDKQ
SYCESCYISTLERCSKCSKPILDRILRAMGKAYHPRCFNCVVCGCCLDGVPFTVDATYQI
HCIDDFHRKFAPRCSVCGQAIMPEPGQEETVRIVALDRSFHVNCYVCEECGLLLSSEGEG
RGCYPLDGHILCKGCSARRIQDLSAKISTDC
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtcctacctggccgcctccaaagactctgggtagcccagtgagaccggtccct
cgactgtcccaatctggaccagccgtgtacagacagctgcccatgaaggtctcctcggac
acccggcccaaatatgtggtccatgaccagaacagaggaggaggcggaatggccactagg
tacttggctacaagatccacagctgggcccatgcagcaccaccaccaagaggacccaggg
tttcaccctaaatctaatgaccactactaccaaccacctccccaccggctcaaagaagac
caatccttgaaccctcacatggaccgctaccagctgatgcaccactccaacatcgatgca
gagattgactcgctcacctgcatgctggccgatctggacagccatccacaaaacagtgca
cagctgtacgacaacgtgccttacgacaaacacatctcaggggactgctacaaaccctca
gcccacccaggagaaccctctcagggcaggcagtccatgggattctcccctcacccccaa
tcccagtcccagtaccctcctgcacccccataccccagtgatccccaccagggtctccag
tacttccctcagccagactacaccaacaaccaggtatccaaacgctacccccagcctgtc
cctgccccctacactactgcctccactcctactggcccgaggttcagtgtccaggtcaaa
acatcccagcctgtcaccaactcccagactggtaggcaagccgaacaggcttacacccct
cccccacaccgccagcacgcgttgtggcccccatcccagaatcagactggccccctgggc
tggtaccctccacaacccgattcccaagcccaggagctgcactctgagaagggttacaag
gggagtgatgcagggtctggagggagagctacccagtgccccatgtccaataaaggccca
gagactcaccaatcagggtcaggctcggcaccaagctccgcctatcagcccagcaagcag
gggacagcagctctgaggccagaggaggagttggaccagctcactaaggagttggtgtat
gacatgaatcatccccctacagaagaatactttggtcgctgtgcacgttgcggtgacaac
gtccttggtgacggcagtggctgtattgccatggagcaggtgttccacgtggagtgcttc
acttgcatcacctgccacactcgtctccgggggcaaccgttctacgcccgggacaagcag
agctactgcgagagctgttacattagtaccctagagcgctgctccaagtgctccaagccc
atcctggaccgtatcctacgggccatgggcaaggcctaccacccgcgctgcttcaactgt
gttgtgtgtggctgctgcctggatggtgtgcccttcaccgtggacgccacctaccagatc
cactgtatagacgacttccacaggaagtttgccccacgctgctcagtgtgtggccaggcc
atcatgcccgagcctggccaagaggagacggtcaggatagtggcgctggaccgcagcttc
cacgtcaactgctatgtgtgtgaggagtgtggtctgctcctgtcgtctgagggtgagggg
cgaggctgttaccccttggacggtcacatcctgtgtaagggctgcagcgcccggcgcatc
caggacctctctgctaaaatatccactgactgctaa
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