Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139378980
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Entry
139378980 CDS
T10872
Name
(RefSeq) multiple PDZ domain protein-like
KO
K06095
multiple PDZ domain protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04530
Tight junction
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139378980
NCBI-ProteinID:
XP_070977744
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Position
21:36597120..36669396
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AA seq
2080 aa
AA seq
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MIETMDTQRALQAVERLQAKLKERGEVPTEEKLSLLKSVLQSPLFHQILALQKSVQLLKD
QGGGVTATFGGDLSECYTTAHANGGHLAYPESSTGTQINGKPSPEEFEHIIRSMAQGRYV
THMELVKPLSGGLGFSVVGLRSENRGELGIFVQEIQPGSVAHCDGNLKETDQILAIDGQP
LDQTVTHQQAIGILQRASECVQLTVARGPIPQLASPVVSRTPSAASTLSAHSSAAHWNHV
ETIELVNDGTGLGFGIVGGKNTGVIVKTILPGGIADQDGHLHSGDHILTIGDTDLYGMGS
EQVAQVLRQCGNRVKLVITRGPPEETSVVPMALPTVTEQQGYEEEEAESFDVGLTKNAQG
LGITIAGYVGDKNSEPSGIFVKSITKDSAVEQDGRIHVGDQIIAVDGMNIQGYTNQQAVE
VLRHTGQTVHLKLVRSGFRPEDIPPAVVPSVIVLPPTPGGRDPTLERTDVVDTTAQGEKQ
YQTLSGESDDSTVKDQLTKNTRDEAKLTEDEELELMKKWQETLGPSNKVVIAQVEKFSES
SGLGISLEANNGHHYIRSVLPEGPVGRCGKLISGDELLEVNGISLIGETHKEVVRILKEL
PVCVYMACCRPAPLLQSDRDSGQTGLDEFSTEPKIKIQGDLSSFLVPGGSEGAATRENVT
EETLGAPLAMWETEIQDIELEKGESGLGFSILDYQDPMDPAKTVIVIRSLVPEGVAERDG
RLLPGDRLMFVNSTNLDNASLEEAVQALKGANIGMVHIGVAKPLPPYNEEDIPSSSSGIS
FFLSSTLLVKESDEEPAEDHLFRAEPALIDSNEGDLTDERALEHRFSGNEDDTLQASMIA
LHGSTCSADMDYQTTLQSSTPKRSARLDLLTEHPLVTLFGLADDTEPFSPEEKPIVFPLP
RSIGGHALTVDDNALTSSDQYLAHHLTQMEPSDLSNSYSPYTDPEPGLNDLGEPVQSLHF
QVESTMAVEDIGEMEGLMKGDEPSVKQSKEEGDEVIITGSNFERTITVVKGNSSLGMTVS
TIKDGLGMYIRSIIHGGSISRDGRLGVGDLILVINGESMANLTNTQARAMLRRHSLIGPD
LGSACAPEEDLCPFYVITYVPVEYLEEYKTSLEQPKDDICSDAPLAPIRGIPELPEREDG
EGEESELQTATFSNWNQPMKVELKREAGKSLGISIVGGRGMGSRLSNGEVMRGIFIKHIM
ADSPAGRNGTLKTGDRIVEVDGVDLSDASHEQAVEAIRKAGNPVVFLVQSIVHRPRSSTT
DTNEERVARRNGDKEVECHSRLFLRLSPTNPFTPTPFKPPKREAGKTSSTTLHLSLPVVP
HVGETDTDTLTEIPDRPSQTEEEDKFGHRWKNISQRYDSLPGLLHMIELEKGKTGLGLSL
AGNRDRSRMSVFVVGIDPSGAAGKDGRVVVGDELLEINGQILYGRSHQNASSIIKSAPSK
VKIIFIRNTDALNQMAVGPVREHGDTLEPQTELETCSSIAPSAIDVDMFKYVQHVILLKE
EGGFGITFSEDTKDGLVIQSITEKGPAGKDGSIKSGDKLLAVEDKPVMGYTVDRVHSLLK
KAKSSVKLTICTDKSSPLLPHCTGQATSLASIHRISMATLGQSESEPIRSSSRSSTPGTL
ASSDPVTCPIIPGCETTIDISKGRTGLGLSIVGGCDTLLGTIIIHEVYEDGAASKDGRLW
AGDQILEVNGIDLRVATHDEAINVLRQTPQRVRLSVYRDEAQYKEEDLWDAFTVELNKKP
GQGLGLSIMGRRNNTGVFVSDIVKGGVVESDGRLMQGDQILSVNKEDVRNATQELVAELL
KCGVGPIVMEVGRFKAGPFHSERRFSQNSQMSETGSCKVTPHSLSASSGSLQVDCDSLQH
TNQESLDHQEIRSVEFTKGPNDSLGISIAGGVGSPLGDVPIFIAMINPTSLVVQTHKLKI
GDIIVSICGTATEGMSHSQAVTLLKKATGTVGLQVVAGSDTTVTGPFHEQTATGLSVSGL
TATSIFHDDLGPPQYKTITLDRGPDGLGFSIVGGFGSPHGDLPIYVKTVFGKGAASEDGH
LKRGDQIMAVNEQSLEGVTHEDAVGILKRTKGTITLTVLS
NT seq
6243 nt
NT seq
+upstream
nt +downstream
nt
atgattgagacaatggatacccagcgtgccttgcaggcagtggagcggctccaggccaag
ctgaaggagcggggggaggtccccaccgaggagaagctaagcttgctcaagtcggtgctc
caaagccccctgttccaccagattctggccctgcagaagtctgtccagctcctcaaagac
caggggggtggtgtcacagcaacatttggcggtgacctgagtgaatgctacacaacagcc
catgccaatggcggccatcttgcctacccagaatcctccactggtacacagatcaatggg
aagccgtctcctgaggagtttgagcacatcattcgctccatggctcaggggcgctacgtg
acacacatggagctggtgaagccgctgtctgggggcctaggcttcagcgtggttggtctg
aggagtgagaaccgcggggagctgggcatcttcgtccaggagatccagcccgggagcgtg
gcccactgcgatgggaatctgaaggagacagaccagatcttggccatagacggtcagccc
ctggaccagacagtgacccaccagcaggccataggcatcctgcagagagcgtctgagtgt
gtgcagcttactgtggccagaggacccatccctcagctggccagccccgtggtgtcccgc
acgccctccgctgcgagcaccctgtctgcccactccagtgcggcccactggaatcatgtg
gagaccatcgagctggtcaacgacgggacaggcctgggctttggcattgtgggaggaaag
aacaccggtgtcattgtcaaaaccatcctgcctggaggcatcgctgatcaggatgggcat
ctgcacagtggggaccacatcctcacgattggggacactgacctttatggcatgggcagt
gagcaggtggctcaggtcctgaggcagtgtggtaacagagtgaagctggtcatcactaga
ggcccgccagaggagacctccgtcgtcccaatggcgttgcccactgtcacagagcaacag
ggctatgaggaagaggaggctgaatcgttcgacgtcgggctgaccaagaacgcccagggt
ctgggaatcactatcgccggctatgtgggggacaaaaattcagagccctctggtattttc
gtgaaaagtataactaaagacagtgcagtagagcaagatggccgcatccatgttggggac
cagatcatagccgtggacgggatgaatatccagggctacaccaaccagcaggccgtggag
gtgctgagacacacgggccagacggttcacctgaagctggtcagaagtggcttccgtcca
gaggacatcccacccgctgtggtgcccagtgtgatcgtacttccaccaaccccagggggc
cgagaccccacactggagagaacagatgttgtggacaccaccgctcaaggtgagaaacag
taccagacattgagtggggaatcggatgactccactgtgaaggatcagttaactaagaac
accagagacgaagcaaagttaacagaggatgaagagttggagctgatgaagaagtggcag
gagacgctcggccccagcaacaaagtagtgattgcccaggtggagaagttcagtgagagc
agtggtctgggcatcagtctggaggccaacaacgggcaccactacatccgctctgtcctg
cccgaggggccagtgggccgctgtgggaaactcatcagtggggacgaactgctcgaggtc
aatggaatatccctgattggtgagacccacaaggaagtggtgaggattctgaaggagctt
cctgtctgtgtctacatggcctgttgtaggcccgcccctctccttcagagtgacagggat
tctggccaaacagggttggatgaattttccactgaacctaaaattaagatacagggagac
ctcagcagtttcctggttcccggaggttccgagggggcggcaacaagggaaaatgtgacg
gaggagactctgggagctcctttggccatgtgggagacggaaatacaggacatcgagctg
gagaagggagagagtggactgggattcagcatcttggactaccaggacccaatggatccg
gccaagacagtgattgtgattcgctctctggtgccagaaggagttgccgaacgggatggc
aggcttttaccaggcgatcggctcatgttcgtcaacagcaccaatctggacaacgccagt
ctggaggaagccgtccaggcactgaagggggccaacatcggcatggttcacattggggtg
gccaagccactgcctccatacaatgaagaggacattccgtcgtcatcctctggaatcagt
ttttttttatcttcaacactgctggttaaagaaagcgatgaggagccagcggaggaccac
cttttccgggcagagcctgcattgattgactccaatgagggagacctgaccgatgagagg
gcattggagcatcgcttctctggcaatgaggatgacaccttacaggcatccatgatcgcc
ctgcacggcagcacatgcagcgccgatatggactaccagactaccttgcagtcctccaca
cccaaacggagtgctcgtctggacttgttgactgagcatcccttggtgacgttgttcggc
cttgcggacgacactgaacccttctccccagaggagaagcccatcgttttccccctgccc
aggagtattggaggtcacgccctaacggttgacgacaacgcactaactagctccgatcag
tacctggcgcatcacttaacccaaatggagccatcggatctgtcaaactcatacagtccg
tacactgaccctgagcctggtttgaatgatttgggggagccggtgcagtctctccatttt
caggtggagtccaccatggccgttgaggacataggggagatggaaggcttaatgaagggg
gatgagccatctgtaaagcagtccaaagaggaaggggatgaggttataatcactgggagt
aattttgaaaggacaatcactgttgtcaagggcaactccagtcttggaatgacagtgagc
acaatcaaggatggcttgggcatgtacatccgcagcatcatccatggaggttccatcagc
cgagacggccgtctgggagtaggggacctaatcctagtcatcaacggcgagtccatggcc
aacctgactaacacacaggcccgcgccatgctccggagacactccctcatcgggccagac
ttgggatctgcttgtgccccagaggaagatctgtgccctttttatgtcattacctatgtc
cctgtggagtatctggaggagtataagactagcctggagcagcctaaagatgacatctgc
tctgatgcacctctggccccaataagaggaatcccagaacttcctgagcgggaggatgga
gagggagaggagagcgagttacagaccgccaccttcagtaactggaaccagcctatgaag
gtggagctcaaaagagaagcgggcaagtcccttggcatcagcattgtggggggcagaggg
atgggcagtcgccttagcaacggtgaggtgatgcggggcatcttcatcaaacacatcatg
gcggacagccccgctggccgcaatggaaccctgaagactggagataggattgttgaggtg
gacggtgtggacctgagtgatgccagtcacgagcaggctgtggaggccatccgcaaggca
ggaaaccctgtagtgttcctggtccagagtatcgtccacaggcccaggtcctcaaccacg
gacaccaacgaggagagagtggcgcggcgcaatggtgacaaggaggttgagtgtcacagt
agactattcctacgcctctccccaactaaccctttcactcctactccgtttaagccgcca
aagcgggaagcgggaaagacatcgtccaccactcttcacctctctcttcctgtggttccc
cacgttggagagacagacacggatactctgacagagattcccgacagaccgtcccagaca
gaagaggaggataagtttggccacagatggaagaacatcagtcagaggtacgacagcctc
ccagggcttctccacatgattgagctggagaaggggaagactggcctgggccttagcctg
gctggcaaccgtgaccgctcccgcatgagcgtgtttgtggtcgggatcgaccccagtgga
gccgccggcaaagacggtcgcgttgtggtcggggatgaactgttggagatcaacgggcag
attctgtatgggcggagtcaccagaatgcctcttccatcattaaaagtgccccatcgaag
gtcaagatcatattcatcaggaacacagatgctctcaaccagatggctgtgggaccagtg
agggagcatggagacacactggagccccagacagagctggaaacatgttcttccattgca
ccctcggcgatcgatgtcgacatgttcaaatatgtgcagcacgtcattctgctgaaggag
gagggtggattcggcatcactttcagtgaggacaccaaggatgggcttgtgattcagagt
ataactgaaaaaggaccagcaggaaaggacggcagcatcaaatctggagataaactcctg
gctgtggaggataagccagtgatgggctacactgtggacagggtccactctttactgaag
aaggccaaaagctcagtgaaattgactatctgcacagacaagtcatcgccccttctccct
cactgtactggtcaggcaaccagcctagccagcattcatagaatctccatggctaccctg
ggccagtctgagtcagagccaatcaggagctctagtcgctcgtccacccctggcactctg
gcttcctctgaccctgtgacctgtcccatcatccccggctgtgagaccaccatagacatc
tccaagggccgcacaggcctgggcctcagcatcgtggggggctgtgacactctactgggg
accatcatcattcacgaggtctatgaggacggagctgcctccaaggatgggagactttgg
gctggggaccagatcctggaggtgaatggcattgacctgcgcgtcgccactcatgatgaa
gctatcaacgtgctgcgccagacccctcagcgggtgcgcctcagtgtttacagggacgag
gctcagtacaaggaggaggacctgtgggatgccttcaccgtggagctgaacaagaagccc
ggccagggcctgggcctcagtatcatggggagaagaaacaacacaggggtgtttgtgtcc
gacatagtgaaagggggcgtggtggagagtgacgggaggctgatgcagggagaccagatc
ctgtccgtcaacaaggaggacgtcagaaatgccacccaggagttagtggccgagctgctg
aagtgtggtgtgggacccatagtgatggaggtgggcagatttaaagccgggcccttccac
tctgagaggaggttctcacagaacagtcagatgagtgaaacaggcagctgcaaggtgacc
cctcactctctgtcagcctcctctggaagcctccaagtggattgtgacagcttacaacac
acaaatcaggagtcactggaccaccaggagatcagaagtgttgaattcactaagggcccc
aatgattccttgggcatcagtattgcgggtggagtgggcagtcccctgggtgatgtgccc
atcttcatcgccatgataaacccaactagcctcgttgtccagacacacaaactcaagatc
ggtgacattatcgtcagtatctgtgggactgctactgagggtatgagccacagccaggcc
gtcaccctgctgaagaaagccaccggcaccgtcgggcttcaggtggtagcagggagtgat
accacagtgaccggcccctttcatgagcagaccgctaccggactctcagtctcaggtctt
actgctactagcatcttccacgatgacctgggacctcctcaatataagaccatcacactg
gacagaggcccagacggactgggcttcagcatcgttggtggcttcgggagcccacacgga
gacctgcccatttatgtgaaaaccgtgttcggaaagggggcagcatcagaggacgggcat
ctgaagcgaggggatcagattatggctgttaacgaacagagtctggagggggtcacccac
gaggatgccgtgggcatcctgaagaggaccaaaggaacaatcaccctgactgtgctttcc
tag
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