Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139378986
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Entry
139378986 CDS
T10872
Name
(RefSeq) protein transport protein Sec24D-like
KO
K14007
protein transport protein SEC24
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04141
Protein processing in endoplasmic reticulum
Brite
Membrane trafficking [BR:
ocla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
139378986
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GFIT
Other DBs
NCBI-GeneID:
139378986
NCBI-ProteinID:
XP_070977759
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Position
21:37956540..37983688
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AA seq
1027 aa
AA seq
DB search
MSQQGYVATPPYSQAQPGMGGYPAGFGSSPAQPLYGHYGGQPQSFPAPPTGLMKPVSSPS
GMPPSEVSSQYGSNIQQNGAHPQRYPAPPAAAAASPYGQPPNSPYHTMAPQAPAQQLTNQ
MGSMNLGYGPGPMQNPQAPPTSPPAQQPFQTAPPPTMGQSTLGPPPTGPHSPQMAPPQSP
LTGPSMGGHPSMGGMGRPFPGPPPPGSGGFQQPGPGAAGQPGYPQQPQGQFGGQMAGPFQ
GGAAHMSGPPQKKLDPDSIPSTTQVTEDDQAKRGGQVYTTNLRGQVPPLVTTDFTVQDQG
NASPRFMRCTTYSFPCTADLAKQCQVPLGAVIKPFATVPKNETPLYVVNHGETGPIRCNR
CKAYMCPYMQFIDGGRRYQCGFCNCVNEVPTFYFQHLDHMGRRVDLYERPELSLGSYEFE
ATLDYCKNNKPASPPAYIFMIDVSYANIKSGLVRLVCEELKTLLDNLPREDGAESSTVKV
GFVTYNKILHFYNVKSALAQPQMMVVSDTAEMFVPLLDGFLVNFQESRAVINNLLDQIPD
MFADTNESETVFAPVIQAGVEALKTAECSGKLFIFHSSIPTAEAPGKLKNRDDKKLINTE
KEKTLFQPQKGVYEQLSKDCVSQGCSVDLFLFPSQYVDLATMGDVPTHTGGSIFKYSNFQ
VEMDGEHFLSDLRKDVEKAIGFDAIMRVRTSTGFRATNFFGAIHMNNTTDVEMAAVDCDK
AVTVEFKHDDKLSEETGALMQCALLYTTVSGQRRLRIHNLSLNCSAQLSELYKSCETDAL
INFFAKSAYRAMLNQPLKTVREILVNQTAHMLACYRKNCSSPSAASQLILPDAMKVFPVY
LNSLMKTGPLVGSAELSTDDRAHQRLIAMAMGVEDTQLLLYPRLIPLHNMDVASDVVPAP
VRCSEERLTDAGMFLLENGRSLFLWLGQACPPELVQRVFNVPSFAHLPADLSSLPVLDNP
QSKKLRSIIDSLLDQRPSAMKLLIVKQKDRSEMLFRQHLVEDKGPHGGASYMDFLCYVHC
EIRQVLT
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcagggttatgttgccacgcctccatactcccaggcccagcctgggatgggg
ggctacccagctgggtttgggagttcgcctgcccagcccctctatggacattatggggga
caacctcagtcattcccagccccaccaacaggtttgatgaagcctgtgtcatctccctcc
ggcatgcctccgtcagaggtctccagccagtatggctcaaacattcaacagaatggagct
caccctcaaaggtaccctgcccctcctgctgctgctgccgcctctccgtatggacaaccc
cctaattccccctaccacaccatggccccccaggccccagcacagcagctcaccaatcag
atgggttccatgaacctcggatatggtccagggcccatgcagaaccctcaggcacccccc
acctctcccccagcccagcagccattccagactgcccctcccccaaccatgggacaatca
accctgggccccccacctacaggcccccattcaccccagatggctcccccacagtcgccc
ctaactggcccatctatgggagggcacccatctatgggaggcatgggtaggcccttccca
ggcccaccccctccaggctctgggggcttccagcagcctgggcctggagcagccggacaa
ccaggataccctcagcaaccacaaggtcagtttggggggcagatggcgggacccttccaa
ggtggggcagcccatatgtccgggccacctcagaaaaagctggaccctgactccatccct
agcacaacacaagtcactgaggacgaccaagccaaacgaggaggacaggtgtacaccaca
aacctcaggggtcaggttcccccgctagtcactactgactttactgtacaggaccaagga
aacgccagtccaaggttcatgcgttgcaccacctactctttcccctgcacggctgacctg
gccaagcagtgccaagttcctttgggtgccgtcatcaaacctttcgccacggtgccaaag
aatgagactcctctctacgtcgtgaaccatggtgagactggcccgatccgctgtaaccgc
tgcaaagcctacatgtgtccctacatgcagttcatcgatggcggccgccgctaccagtgc
ggcttctgcaactgcgtcaacgaagtgccaactttttatttccaacacctggaccacatg
ggcagaagggtggatttatatgagaggccagagctgtcgctggggtcctatgagttcgaa
gccaccctggattactgcaagaacaacaagccagccagtcctccggcgtacatcttcatg
atcgacgtgtcctatgccaacatcaagagcggactggtcagactggtatgtgaggagctg
aagaccctgctagacaacctgcccagagaggatggtgccgagagctcgacggtgaaggtg
ggcttcgtcacttacaacaagatcctacacttctacaacgtgaagagtgccctggcccag
cctcagatgatggtggtgtccgacacggccgagatgtttgtcccactgctcgacggcttc
ctcgtcaacttccaggagtctcgcgccgtcatcaacaatctcctggaccagatccctgat
atgtttgctgacaccaacgagagcgagacggtctttgcccccgtcatccaggctggggta
gaggcactcaagacagcagaatgcagtggcaagctgttcatcttccactcatccatcccc
accgccgaggcccctgggaaactgaagaacagggacgacaagaagctgatcaacacagag
aaagagaagactctgttccagccccagaagggtgtgtacgagcagctctccaaggactgt
gtgtctcagggttgcagcgtggatctcttcctcttccccagccagtatgtggacctcgcc
accatgggagacgtccccacacacacaggaggctccattttcaagtacagcaacttccag
gtggaaatggatggagagcatttcttgagtgacctgaggaaggatgtggagaaggccatc
gggtttgacgccatcatgagagtccgcaccagcacaggcttcagggctacaaacttcttc
ggtgctatccacatgaacaacaccacagatgtggagatggctgccgtggactgtgacaag
gctgtgactgtggagttcaaacacgatgacaaacttagcgaggagacgggcgcactcatg
cagtgtgccttgctgtacacgaccgtcagcggccagcgtcgtttgcggatccacaacctc
agtctgaactgcagcgcccagctgtctgagctgtacaagagctgtgagactgacgccctc
atcaacttctttgccaagtcagcgtaccgtgccatgctgaaccagcccctgaagacggtg
agggagattctggtcaaccagacggcccacatgctagcctgctacaggaaaaactgttcc
agtccctccgctgccagccagctgattctgcctgatgccatgaaggtgttcccagtctac
ttaaacagcctgatgaagactggtcccttggtgggcagcgctgagctctctacagacgac
agggctcaccagagactcatcgccatggccatgggggtggaggatacccagctgctgctc
tacccacgccttatcccactgcacaatatggatgttgccagtgatgtggtgccagctcca
gtgcgctgttctgaggagcgcctgacagatgctggcatgttcctgctggagaatgggcgc
tccctcttcctgtggctgggccaggcctgccccccagagctggtccagagagtcttcaat
gtgccctcctttgcccacctgcccgctgacctgagctccctgccagttctggataaccca
cagtctaagaagctgcgttccatcattgactcattgcttgaccagaggcccagcgccatg
aagcttctgatcgtgaagcagaaagaccggtctgagatgctgttccgccagcacctggtg
gaggacaaggggccccatggtggagcctcctacatggacttcctgtgctacgtccactgc
gagatcagacaagtcctcacttaa
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