Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139379043
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Entry
139379043 CDS
T10872
Name
(RefSeq) excitatory amino acid transporter 3-like isoform X1
KO
K05612
solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter), member 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
139379043
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139379043
Transporters [BR:
ocla02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
139379043
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Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
139379043
NCBI-ProteinID:
XP_070977881
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Position
21:complement(39764300..39782331)
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AA seq
522 aa
AA seq
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MKEHRSWDLKGLLKRNWLLIATIVSVLLGIGLGVLVREYASLSHLDKQYFGFPGDILMRM
LKLVILPLIISSMITGVAALDSDVSGKIGLRAVVYYLTTTIIAVILGIALVITIKPGVSQ
KAENIDRTEITQNVNTVDTLLDLVRNMFPENIVQACFQQYKTTRKELEPSKVKENTTTTM
FPPFSTTVMATIFPPENITKDYIIVGSYSDGLNVLGLIVFCVAFGLVIGKMGERGRILLE
FFDALNEATMRLVQIIMCYMPVGILFLIAAKIIEVEDWEIFMKLGMYMVTVLSGLAIHST
VFLPLIYFVIVRKNPYTFALGMAQALVTALMISSSSATLPVTFRCAEENLRIDKRITRFV
LPVGATINMDGTALYEAVAAIFIAQLNNYDLDVGQIVTISVTATVASIGAAGVPNAGFVT
MVIVLTAVGLPANDVTLIIAVDWLLDRFRTMINVLGDAYGAGIVQKLSRRELERMDGTSD
VTNPFALGTTLDNEECEKKSYVNGGFTVDKTDAISFTETSQF
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaacacaggagctgggacctcaaaggcttactgaagaggaactggttgctgatt
gcgaccattgtgtcggtgctgttagggataggccttggtgtgttggttagggaatatgcc
tccctttcccacctcgataagcagtattttggattcccgggagatatcctgatgcggatg
ctcaagctggtcatcctgcccctcatcatctccagcatgataacaggagtggccgccctg
gattcggatgtttccggaaagataggtttgagggctgtggtttattacttaaccaccacc
atcattgcagtcattttgggtattgcattggtgataaccatcaaacctggtgtctctcag
aaggcagaaaacatcgacaggacagagatcacacaaaacgtcaacaccgtcgacacacta
ctggatcttgtcagaaacatgtttcctgaaaacatagtgcaggcttgtttccaacagtac
aagacaacgcgcaaagagttggaaccctctaaagtgaaggagaacactacaaccacaatg
ttccctcctttctctaccactgtcatggcaaccattttccccccagagaacatcaccaag
gactatataatagttgggtcatattctgatgggctcaacgtgctgggcctcatcgtgttc
tgtgtggcgtttggcctcgtcatcggcaagatgggtgaaaggggacgcatcctgctggag
ttctttgatgctttaaatgaggccaccatgaggctagttcagattatcatgtgctatatg
ccagtggggatactcttcctcattgctgccaagatcattgaggtagaagactgggagatc
ttcatgaagttgggcatgtacatggtgacagttttgagtggcctagctatccattctact
gtttttttgccgctgatctactttgtcattgtgaggaagaacccgtatacctttgccttg
gggatggctcaggcactggtcactgctctcatgatctcttccagctctgccaccctgcct
gtcaccttccgctgtgccgaagagaacctccggatcgacaagaggatcacccgcttcgtg
ttgcccgtgggcgccaccatcaacatggacgggacagctctctacgaggctgtcgctgcc
atcttcattgcccagctcaacaactatgatcttgacgtgggtcagattgtcactatcagt
gtaacagcaacagtagccagcatcggagctgccggtgtacctaacgctggttttgttacc
atggtgattgtgctgactgccgttggactaccggcaaatgatgtcactttaattattgct
gtggattggctgctagaccgcttccgcaccatgatcaacgtgctgggagatgcctacgga
gctggcatcgttcagaagctgtccaggcgggagctggagaggatggacggcacctcggac
gtgactaaccccttcgccctggggaccacgctggacaacgaggagtgtgagaagaagtcc
tacgtcaacggcggcttcaccgtcgacaaaaccgacgccatctccttcaccgagacctca
cagttttag
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