Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139379262
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Entry
139379262 CDS
T10872
Name
(RefSeq) platelet glycoprotein Ib alpha chain
KO
K06261
platelet glycoprotein Ib alpha chain
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04512
ECM-receptor interaction
Brite
CD molecules [BR:
ocla04090
]
Proteins
139379262
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_9
LRR_LRWD1
LRRCT
Motif
Other DBs
NCBI-GeneID:
139379262
NCBI-ProteinID:
XP_070978161
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Position
21:53055715..53100754
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AA seq
633 aa
AA seq
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MALVFLLLFLPLSHHSNAMTGCHSDRDKDHRPRVNCTATNLSDVPASIDTTTKVLIFTQN
QFSSLTWSSYSHFPELYEIDLSHNTIPEVPLSPGPILPTLGVLRLVGNRIRTLPPHSFRA
TPGLLELYLDQNILETLDDLSFSGLRLLQILELSQNRISVLPPLMFRSLPAIETLVLEQN
HIRTMPDQWFSAKPEVPYTYLSQNPWACFCKVGYLKKHLDDQGFNVYTRDGIIITPDEES
VTCATPPSLAGRPIVGLEDEEYCSPGAKPDGPPGDSEPQPTPTLPPTTTMPPTTGATTTV
PTTFPTTTTPATTTTVVPTTPATTTTTVVPTTPATTTATVVPTTPATTTTSTTTTTATTT
VVPTTTTTATLKPTTPPLHPTDPTHLPLLLNESVTWSWWEIVTILVEWEESRAGKEEGMV
GGGNSWEHHGLYRGSSRLSPHPTMTTTVTPRAPSQPPRTPTQPPRTPPRTPTQPPRTPTQ
PPRTPTQPPRTPTQPPRTPTQPPLPRTQTLTAPVTTVRQVGGSDPWGDQLGRGGGSAAGG
RAVFCWWLFAGCVLLCVLSGGHDSNTILKFADDITVVGLITDNNKIANREEVRDLAVRCQ
DIKLLLNMIKTKEMIVEYRKRTEHAPILIDGAV
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcactcgtcttcctcctcctcttcctccccctctctcaccactccaatgccatgact
ggttgccatagtgaccgtgacaaagaccaccgcccccgggtcaactgcacggcaaccaac
cttagtgacgtccccgccagcatcgacacgacaaccaaggtgctgatcttcacccagaac
cagttctccagtctaacctggtcctcctatagtcacttcccagagctctatgagatagat
ttgagccacaacacaattccagaggttcccctgtcccccggcccgattctccccactcta
ggggttctacgcctggtagggaaccgcattagaaccctgccccctcactccttcagggcc
acgccgggcctgctagaactctatctggaccagaacattctggagacactagacgacctg
tccttctctgggctcaggctgctacagatcctggaactttctcagaaccgtatctctgtt
ctgccccctctgatgtttcgctccctcccagccatcgaaaccttggttctagagcagaac
cacatcagaaccatgcctgaccagtggttctctgccaaacctgaagttccctacacctac
ctgtcgcagaacccctgggcctgcttctgtaaggtgggttacctgaagaaacacctggat
gatcagggcttcaacgtgtacacgagggatggaataatcatcactccggacgaagagagt
gttacctgtgccacacctccctccctggccggccgaccaatcgtggggctggaggatgag
gagtactgctcacctggtgccaaacctgatggcccccctggagactctgaacctcaacct
acccctacactaccccccaccaccactatgccaccaaccacaggagccacaaccacagtt
cctactaccttccccaccactactactcctgctaccactactactgtggtacccactact
cctgctaccactactactactgtggtacccactactcctgctactactactgctactgtg
gtacccactactcctgctaccactactacttctactaccactactactgctactactact
gtggtacccactactaccaccacagctaccctgaaacccaccacccctcctctacaccct
accgaccccacccacctgcccctcctgctgaatgagtcagtcacatggtcttggtgggag
atagtgaccatcctggtggagtgggaggagagcagggcggggaaagaggaggggatggtc
gggggagggaacagctgggagcatcatggtctctatagaggatcttccagactctcacca
caccccaccatgaccacaaccgtcacacctagagccccatctcaaccacctaggacccca
actcaaccacctaggaccccacctagaaccccaactcaaccccctagaaccccaactcaa
ccccctagaaccccaactcaaccccctagaaccccaactcaaccacctaggaccccaact
caacccccactacctagaacccagaccctgaccgccccagtgaccacagtcagacaggtt
ggaggttcagatccctggggggatcagctgggacgggggggtggtagtgcggcaggaggc
agagctgtgttctgctggtggctgtttgcagggtgtgttttgttgtgtgttctgtctggg
gggcacgactccaacaccatccttaaatttgccgatgacataacagtggtaggcctgatt
accgacaacaacaagatagccaatagggaggaggtcagagacctggccgtgcggtgccag
gacatcaaactcttgctcaacatgatcaagacaaaggagatgattgtggagtacaggaaa
aggaccgagcacgcccccattctcattgacggggctgtatag
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