Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139379335
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Entry
139379335 CDS
T10872
Name
(RefSeq) caprin-2-like
KO
K18744
caprin-2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139379335
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
139379335
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
BclA_C
Motif
Other DBs
NCBI-GeneID:
139379335
NCBI-ProteinID:
XP_070978240
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All DBs
Position
21:complement(16493501..16500073)
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AA seq
958 aa
AA seq
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MNPVGDTKCAHIRENLNMVQLSPSPARDVSPSPECSEKGRQGSPKIGSPGGLSPLQLALA
ASTTIYQGYESYIEDGLICLKHKIRNLEKKKIKLEDYRKRLKHGESLNQDQIDAVEKYDE
VIHNLQFAQELHKTLGGLTQELLKAQKKALRKEQIVKQEVERRRLCIVLQVKFLLQTLLQ
HEHIRKDLLSARNPQLKVAELHSLLELAELLGVKRDNNVSLEDQMDRAALVYLDLLEGKN
KAVAGTTYKVLKAKLATLMDCGYFDCVPPPPSKSPKEVEDPMTKKTVSETASLSTLMTSN
KKDVPSREFLNRHYLPDTDPNGCRDTHVTPNWKAEFQAMKEQEPPDSWDMESDSTQPVIQ
KPWRGAAVLISKVPVTSKKQNAEPKQRRAKSKRERDATAALRVVTPVEVFNSQSTLPKDP
ILRKQQMEDLMTKIRGSFSFMQDSLLDGEGSPTNGRPRLGRHASGSPSPLVQRDSRRSPV
DLLPKTLHSTPLLSKLLPVDDKPSLTNGDGGCLESCDLDLTTEDLAHVIAIDPCLLLSES
ETACPSPPAPPPLYCRESSISITLDEKTSARTPISESGKQSPCNGVVPPCTPTQGQPFST
PPSRRTLTMAPPVRFQTMHSVFKVNAPLLPTVDFKSDIIPYSDSNDLCYVTTSTQTPPEF
APSEDEQLQSVNQSECLVGSGGQIFLSPGQSGGTMGRSDQSYYRGSVRGIARGGKGLAHS
YFRSSGGHRGGSFIPQAHLYGARDIGYQHSYRRGGGNTGQRHNNSGWSDSSQVSSPDREG
NYSLVDSAHGDSLQGVGMDLTTQVTPHAPHTLMHVPMYPLPQHPQPLRVAFTAARTANYT
PGTLDQPIAFDQLHSNLGEMFNTNVGRFTCPANGTYVFLFHILKLAVNVPLYVNLMRNDE
VMVSAYANDGAPDHETASNHSILQLYQGDQVWLRLHRGSIYGSSWKYSTFSGFLLYQD
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgtcggcgacacaaaatgcgcacacattcgtgagaatctgaacatggtgcag
ctttctccatccccagcccgggatgtctctccttcacctgagtgctcagagaaggggagg
caggggagccccaagattggctcccctggtggactgagtcctctccagctggccctggca
gcctccaccaccatctaccagggctacgagagttacatcgaggacggcctcatctgcctc
aagcacaagatccgcaacctggagaaaaagaagattaaattggaagactacaggaagcgt
ttgaaacacggggaatcactcaatcaagaccagatagatgcagtggagaagtatgacgaa
gtgatccacaacctgcagtttgcccaggagctgcacaagacccttggtggcctaacacaa
gaactgctaaaggcccagaagaaggcgttgaggaaggagcagattgtcaagcaggaggtt
gagaggagaaggctgtgcatagtgctgcaggttaagttcctcttgcagaccctgctgcag
cacgagcacatcaggaaggacctcctctctgcccgcaacccccagctcaaggttgcagag
ctacatagcctgcttgagcttgctgaactactgggggtgaagagggacaacaatgtgagt
ttggaggatcagatggacagagcagccctggtctacctggacctgctggaggggaaaaat
aaagccgtagccggaaccacttacaaggtcctgaaggctaagttggcgacgctgatggat
tgtgggtactttgattgtgtaccgccgccaccgagcaagagtcccaaggaagtggaggat
cccatgaccaagaagacagtgtctgaaacagccagcctctctaccctaatgacgtcaaac
aaaaaagacgtgcctagcagagagtttcttaacagacactacctgcctgacacagacccc
aatgggtgtcgagacactcacgttactccgaactggaaggctgagttccaggctatgaag
gaacaggagccaccggactcatgggatatggagtccgactccactcagcctgtaatccag
aaaccatggagaggggcggctgtgttaatctccaaagttccagttacctccaagaaacaa
aatgccgaacccaaacagagaagagcgaagtccaaaagggagcgggacgccacagctgca
cttcgtgtggtcacccctgtggaggtgttcaactcccagtctaccttgcccaaggacccc
atcctgcgcaaacagcagatggaggacctgatgaccaagatcagaggctccttcagcttc
atgcaggattctcttctggatggagaaggatcacccactaacggccgtcctagactgggc
cggcatgcctctggatccccctctccactcgtacagagagattcgaggagaagcccagtg
gaccttctccccaaaacactgcattccactccattgctttctaaactcctccctgttgat
gacaaacccagtctgaccaatggcgacgggggttgtctagagagctgtgacctggacctg
actacagaggacctggctcacgtcatagccattgatccatgtctgctgctgtctgagagt
gagactgcctgcccctctcctccagctcctcctcccctctactgtagggagtcctccatc
tccatcaccctggacgagaagacatctgctcggactcccatctctgaatccggtaagcaa
tccccctgtaacggggtggtgcctccttgtacccccacccaagggcagcccttttcaacc
cctcccagcaggcgtacactcaccatggcgccccctgttcgcttccagaccatgcattcg
gtcttcaaggtgaacgcccccttacttccgactgtagactttaaatccgatattatcccc
tattcggactccaacgacctgtgctatgtcaccaccagcacccagaccccaccggagttt
gctccgtcggaggacgaacaactacagtcggtgaaccagtctgaatgcctggtaggtagt
ggtgggcagatcttcctgtcccctggccaatcgggtggcaccatgggccgttctgaccaa
tcatactacagaggatctgttagaggtattgcacgtggtggcaaggggctggcacactcc
tactttcgctcttctggtgggcacagaggaggaagcttcatcccccaggctcacctgtac
ggagctcgggacattggctaccaacatagctacaggcgcggtggaggcaatacaggacaa
aggcacaataatagtggttggagtgactcttcccaggtgagcagcccagaccgggagggc
aactactccctggtggactccgcccacggtgactcgctgcagggtgttggcatggacctc
accacccaggtgacccctcatgccccccacaccctgatgcacgtacccatgtacccgctc
ccccagcatccccagcccctccgcgtggccttcacagcagcccgcacagccaactacacc
ccgggcaccctggaccagcccatcgcctttgaccagctccacagcaacctgggggaaatg
ttcaacaccaacgtgggtcgtttcacctgcccagccaatggcacctacgtcttcctcttc
cacatcctcaagctggcggtcaacgtgccgctctacgtcaacctgatgcgcaacgacgag
gtgatggtgtctgcgtacgccaacgacggggctccggaccacgagacggccagcaaccac
tccatcctgcagctgtaccagggagaccaggtgtggctgcggctgcaccgcggctccatc
tatggcagcagctggaagtacagcacattctctggcttcctgctctaccaggactga
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