Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139379348
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Entry
139379348 CDS
T10872
Name
(RefSeq) solute carrier organic anion transporter family member 1C1-like
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
139379348
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139379348
Transporters [BR:
ocla02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
139379348
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GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
Sugar_tr
Motif
Other DBs
NCBI-GeneID:
139379348
NCBI-ProteinID:
XP_070978257
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Position
21:18090830..18153332
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AA seq
729 aa
AA seq
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MPRNFIRGTLPKENESHLCRMEPVAKERGTTENGGSSSTREQRSSCSSLKMFLVALSFAY
FAKALSGSYMKSTITQLERRFDIPSYLTGVIDGSFEIGNLLVIAFVSYFGAKLHRPKIIA
MGCVLMAVGTFIIALPHFLIGRYKFETSIRSSVNSTNNLSPCPARLLSPSSQASGDPLSE
APSTGTGCEGESNLSMWIYVFLGNVLRGIGETPVQPLGISYIDDFAREENAAFYIGCVQT
IAVIGPVFGYLLGSLCAKIYVDIGFVNMESITISPGDARWVGAWWLGYLIAGVITLLSAI
PFWFLPRSLPIPSDRGPAQCTPECTSFIKDPPLLEHKYQADEPAGFLEMAKDFIPTLKTL
LGNPVYFIYLCVTIVQLNSLIGMVTYKPKYIEQHYGQSASKANFLMGTINIPAVALGIFT
GGLLMKRLKLSIMGAAKFAFGTSLIGYFLSLFFFVMSCENVKVAGITLPYNRAGGVSYEE
RSVISACNSDCVCSGRDWDPVCGENGITYVSPCLAGCQTSTGSGKNTVFSNCSCVVAAGL
SSGNLTASVGHCPHRDDCDRVFPYFLALSVITSFIISLGGTPGYMVLIRCIKPQLKSLAL
GFHTLSTRTLAGIPAPIYFGAVIDTTCLKWGQKRCGGRGACRIYNTTAYRIAYLGLTMGL
RTVSFLLCILGFVLLKQHLRREECRAHQVANGGAELEALRKEEVLASNSDQSLQTSTTDY
INTERETRL
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgccaagaaatttcattaggggaactttgcccaaggaaaacgagagccatctgtgtagg
atggagccggtggccaaggagagagggacaacagagaatggaggcagctcctctacgagg
gagcaacgctcctcctgctccagcctcaagatgttccttgtggccctatcatttgcctac
tttgccaaggccttgtctggcagctacatgaagagcacaataacccagctggagaggcgc
tttgacatccccagttacctaacaggcgtcatcgacgggagctttgagataggtaacctg
ttggtgatagcattcgtgagttactttggtgcaaagctgcatcggcccaagatcatagcc
atgggctgtgtactgatggcagtgggaacattcatcatcgctctgccacacttcctcatc
ggacgctataagttcgaaacgtcaatccgatcgtcagtgaattcaaccaataacctctct
ccatgtccagcgcgcctgttgtcaccctcctcgcaagcttcgggtgacccgctttctgag
gcaccaagcacagggacaggttgtgaaggagagtccaacctctccatgtggatctatgtg
ttcctggggaacgtcttacgagggatcggggagactccagtgcagccccttgggatctcg
tatatagatgatttcgccagggaggaaaatgctgcattttacattggctgcgttcagacc
atagcagtcattggtcctgtgtttggctatttactgggatccctgtgtgccaaaatatat
gtggacattggatttgtcaacatggagagtatcaccataagccccggtgatgctcgctgg
gtgggggcctggtggttaggttaccttattgctggggtaatcaccctgctttcagccatc
cccttttggttcctgccccgttccctgcccatcccgtcagaccgaggcccagcccagtgc
accccggagtgtactagcttcatcaaagacccccctctcctggagcataagtaccaagcc
gacgagccagctggctttctggagatggccaaagatttcataccaacgttgaaaaccctc
ctggggaacccagtgtacttcatctacctgtgtgtgaccatcgttcagctgaactctctc
atcggcatggtaacctacaagcccaagtacatagagcaacattacggacagtccgcatca
aaagccaatttcctgatgggtacaatcaacatccctgccgtggcgttgggaattttcact
ggcggcctgctcatgaagaggctgaagctgagcatcatgggagcagcaaagtttgcgttc
ggcacctctctgataggctacttcctatccctcttcttcttcgtcatgagctgcgagaac
gtcaaagtggctgggatcacgctgccctacaacagggcgggtggtgtatcgtatgaggag
cgctcagtaatctcagcctgtaactccgactgtgtttgttcaggcagagactgggaccct
gtctgtggagaaaacggcatcacgtacgtctctccctgcctggctggctgccagacctcc
acaggatcagggaagaacacggtgttctctaactgtagctgtgtggtggcagcagggctg
agcagtggtaatctgacagccagtgtaggccactgtcctcacagagacgactgtgaccgt
gtcttcccttacttcctggctctttctgtcatcacttcctttatcatctccctgggtggc
acgccaggctacatggtcctcatcaggtgtatcaagcctcaactgaagtccttagctctg
gggttccatactctgtccacacgtacacttgcgggcatcccagcgcccatctactttggg
gcggtcatcgacaccacgtgtctgaagtggggccagaagagatgcggagggagaggagcc
tgtcggatatacaacactacagcatacaggattgcttacctgggtctgactatgggcctg
aggacagtttcttttctgctgtgtatactgggattcgtactgctcaaacaacacctgcgg
agagaggaatgccgcgcccaccaagtggccaatggcggagcagaactggaggcactcagg
aaagaggaggtcctagcctccaactcggaccaatcgctacagacttccacaacagactac
atcaacacagagagagagacacggctgtga
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