Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139379398
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Entry
139379398 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: meiotic recombination protein REC8 homolog
KO
K13054
meiotic recombination protein REC8, animal type
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
139379398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139379398
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Meiosis-specific proteins
Cohesin complex and associated proteins
139379398
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Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
SMC_ScpA
Motif
Other DBs
NCBI-GeneID:
139379398
NCBI-ProteinID:
XP_070978308
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Position
2:complement(11672825..11677961)
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AA seq
629 aa
AA seq
DB search
MFFSPSVLNRHTGCFSTIWLAATKGIKIPQKDFLKVNVQRTCNDIMDYVLVRVPPPLPGL
PRPRFSLYLSSQLQYGVIIVYHRQCGMLLEEIQHILDRLAKTRTAQMIDVDESDRHTLSL
PDVLSLLEESEWAANPFFGEIHSGYTMPSPNTLIQLGGEFRRESTPERPLLLSPGTPPQD
GITASPDSITLIETEPVTIPSAEFEGVELAEVTHQNMGMIDLLMDQLDHFPEGEXQRERG
PEREEREREGESVGEGDLEREGESEQEVERAEAIERRRDVIGSLIGLPYTTLSSEDPTVL
PGEETELPMEMPAALAEERTPVSVPLPPSTPGEPEERGMARERGRWRDSPTLQDVTPPVK
QPRRRQLLFIDQETQISQEALQQQIDNTLIQTRPLVVISGPSKRTVSPVDLLGNPCTTLP
PELLLPWKRVAIVTALTGSALLVGRTETDSESERERDKERVMKAKEEGDREQEGELSSKE
VPRELAESGLSQHDVSTRSPLSLEVSDRDMSRETPPLDTPESRGSPVPRSVSKLKDIPEE
GEGPLEREAEDIPMDDLSADAVTEPLEDHEGVLFHSLLPPLAQRSSVTHSFWTLLEMVTA
RRLCVQQDEPYGDIIISPGPNYEEGNESV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtttttctccccaagcgttttgaatcgtcacacagggtgcttctccacaatatggttg
gctgccaccaaagggataaagatcccacaaaaagatttcctgaaagtcaatgtccaacga
acatgtaatgacatcatggactatgtgctggtgcgagtcccgccccctctgccgggattg
ccccgcccccgtttctccctctacctctcctcccagctccaatatggtgtcatcatcgtc
taccaccgccagtgtgggatgctcctggaggagatccagcacattctggacagactagcc
aagaccagaaccgcccagatgatcgatgtggatgagtctgatagacacactctttctctc
cctgacgtgttgtctctcctggaggaaagtgagtgggcagcgaaccccttctttggagaa
atacattctgggtacaccatgcccagccctaacacactaatacagctgggtggagagttt
aggagagaatccactcctgagcgccccctgcttctgagtccaggtactccccctcaggac
ggtatcacagcgtctccagactccatcactctgatagagactgaacccgtcaccatcccc
tcagcagagtttgaaggggtggagctcgctgaggtcacacatcaaaacatggggatgatt
gacttgctaatggaccaattagatcacttcccagagggtgagtgacagcgagagaggggc
ccagagagagaagagagggagagagaaggagaatctgtgggagaaggggacttggagaga
gagggagaaagtgaacaagaagtagaaagagcagaagcgatagagaggaggagagatgtc
attggatcccttattggactgccgtataccaccctatccagcgaggaccccactgtgctg
cctggcgaggagacagagctgcccatggagatgcctgccgcactcgcagaggagaggaca
ccagtgtctgtccctctgcccccttccacacctggtgaaccagaggagcgagggatggct
agagagagagggagatggagagatagccccaccctacaggatgttactcccccagtgaag
caacctcgtaggaggcagctgctcttcatcgaccaggaaacacagatatcccaggaggca
ctgcagcaacagatagacaacactctcatacagaccaggcccctggttgtaatcagtggt
ccctctaagagaacagtgtctccagttgatctccttggtaacccatgcaccaccctccct
ccagagctgctgttgccatggaaacgggtggcgattgtcacagcgctcactggctccgcc
ctgctggtagggaggacagagacagactcggagtcagagagagagagggataaagagaga
gtgatgaaggcaaaggaggagggagacagagagcaggagggagagctcagctcaaaagag
gtacctagagagttggcagagtctggcctgtcccagcatgatgtttccactcggtctccg
ctgtccctggaggtctctgatagagacatgtcccgggagaccccccccctggacacaccc
gagagcagagggtctcctgtccccaggtctgtgtccaaactgaaggacattccagaggag
ggcgagggaccgctggagagagaggcagaggacatacctatggatgacttatcagcagac
gcagtgacagagcctcttgaggatcatgaaggggtgctgttccactctctgctgccccca
ctggcccaacgcagtagtgtcactcactcattctggaccctactggagatggtaactgcc
aggagactctgtgtgcagcaggatgaaccttatggtgacatcatcatttcacctggaccc
aactatgaggaggggaatgagagtgtgtaa
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