Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139379450
Help
Entry
139379450 CDS
T10872
Name
(RefSeq) thyroid receptor-interacting protein 6-like
KO
K12792
thyroid receptor-interacting protein 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
139379450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
139379450
NCBI-ProteinID:
XP_070978363
LinkDB
All DBs
Position
21:35788954..35793068
Genome browser
AA seq
556 aa
AA seq
DB search
MSGPTWPTQKTPGSPERPVPQMSDSEPAVYRQPPKKVSSDARSKYVVHDQNRGGGMATRY
LATGPTAGPMQHHHQEDPGFHPKSNDHYYQPPPHRLEEDQSLNPHMDRYQLMQLAPPEKL
IGHHSNIEGEIDSLTCMLADLDSYSLNSTQLYDNVPYNKTSGQSGAPSQGWPSMGFPPQS
TDHPAPPNPSDPHQGLQYFPQPDYTDAQVSKPYPQHVPASYTTASTPTGPRFSVQVKTAQ
PITYSQTGRQAEQGYTPPPHRQHMLRNSPQNLASEAQAQDSDRSFKGSVAGSGVKASQSP
TPKRGPETHQSGSGSALSSACQPSKQGTAALRQEELDGLTKKLVYDMNHPPTEEYLGSCA
CCGGNVLGDVSGCIAMEQVFHVECFTCITCHSPFRGQPFYDLDKQSYCKSCYISVLERCF
MCSKPILDRILRSMGNAYHPRCFNCVVCGCCLDGVPFTVDATSQIHCLDDFHRKFAPRCS
VCGQVIIPEPGQEETVSIVALGRNFHVKCYVCEECGLLLSSEGEERGCYPLDGHILCKGC
SAQHIQNPSANISTDR
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtcctacctggccgactcagaagactcctggtagcccggagagacccgtcccc
cagatgtccgactctgaaccagccgtgtacagacagccgcccaagaaggtctcctcggat
gccaggtccaagtatgtggtccatgaccagaacagaggaggaggaatggccactaggtac
ttggctactggacccacagctgggcccatgcagcaccaccaccaagaggacccagggttt
caccctaaatctaatgaccactactaccaaccacctccccaccggcttgaagaagaccaa
tccttgaaccctcacatggaccgctaccagctgatgcaacttgcacctcctgagaagctg
attggacaccactccaacattgagggagagattgactcgctcacctgcatgctggctgat
ctggacagctattcactaaacagcacacagctgtacgacaacgtgccttacaacaaaacc
tcaggccagtcaggagccccatctcagggatggccgtctatgggtttccctcctcagtcc
acggaccatcctgcacccccaaaccccagtgatccccaccagggtctccagtacttcccc
cagccagactacactgacgcccaggtctccaaaccctacccccagcatgtccctgcctcc
tacactaccgcctccacccctactggcccgaggttcagtgtccaggtcaaaacagcccag
cctatcacctactcccagactggtaggcaagccgagcagggttacacccctcccccacac
cgacagcacatgttgcggaactcgccccagaatctcgcttccgaagcccaggcgcaggac
tccgacaggagcttcaaggggagtgtcgcagggtctggcgtgaaagcctcccagagtccc
actcccaaaagaggcccagagactcatcaatcagggtcaggctcggcactgagctccgcc
tgtcagcccagtaagcaggggacagcagctctgagacaagaggagttggatgggctcaca
aagaagttggtgtatgacatgaatcatccccctacagaggaataccttggtagctgtgca
tgttgcggtggcaacgtccttggcgacgttagcggctgtatcgccatggagcaggtgttc
cacgtggagtgtttcacttgcatcacctgccactcccctttccgggggcaaccgttctac
gacctggacaagcagagctactgcaagagctgttacattagtgtcctagagcgctgtttt
atgtgctccaagcccatcctggaccgtatcctgcggtccatgggcaatgcctaccaccca
cgctgcttcaactgcgtggtgtgtggctgctgcctggacggtgtgcccttcaccgtggac
gccacctcccagatccactgcctagacgacttccacaggaagtttgcccctcgctgctca
gtgtgtggccaggtcatcatccccgagccgggccaggaggagacggtcagtatagtggcg
ctgggccgcaacttccacgtcaagtgctatgtgtgtgaggagtgtggtctgctcctgtcc
tctgagggtgaggagcgaggctgttaccccctggacggtcacatcctgtgtaagggctgc
agcgcccagcacatccagaacccctccgccaacatctccactgaccgctaa
DBGET
integrated database retrieval system
