Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139379452
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Entry
139379452 CDS
T10872
Name
(RefSeq) thyroid receptor-interacting protein 6-like
KO
K12792
thyroid receptor-interacting protein 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
139379452
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Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
139379452
NCBI-ProteinID:
XP_070978365
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Position
21:35832242..35835954
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AA seq
577 aa
AA seq
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MSGPNRLPLKTPGSPERPVPQMSDSGPAVYRQPPKKVSSDTRPKYVVYDQNGGGMATRLL
VPHLATSPTAGPMQHHHQEDPGFHLKSNDHYYQPPPQGLDEDQSLNLHMERYQLMHWVTP
EKLIGHHSSSDAEIDSLACMLADQDSHTLNGTQLYHNVPYNKYILGDHYRPSAQPGAPSQ
GEPFMGFPPQSTDHSTPPNPSDPHQGLQYFPQPDDNDTQVSKSYPQPVPASYNTTSTHTG
PRFSFQVKTAQTVTYFQTGRQAGQAYTPPPHRQHALWSPPKNQTGPQGWFPPHPASQVQE
LHSERGYKGSAAGFGGRANQCPTSNGVTETHQSGSAPSSAYQPSKQGTAAPRPEEELGQP
TKKFVYDMNHPPTEEDFGCCARCGDKVLDDGSDCITMEQVFHVDCFTCVTCQAHLRGQPF
YAIDKQSHCRSCYISVLERCCMCSKPILDRVLWSMGNAYHPRCFNCVVCGCCLDGVPFTV
DATSQIHCIDDFHRKFAPRCSVCGQAIIPGPGQDETISIVALDRNFHVNCYVCEECGLLL
SSEGEERCCYPLDGHILCKGCSAQHILNPSAKISTDC
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtcctaaccggctgcctctgaagactcctggtagcccggagagacccgtcccc
cagatgtccgactctggaccagccgtgtacagacagccgcccaagaaggtctcctcagac
acccggcccaagtatgtggtctatgaccagaacggaggaggaatggccactaggttacta
gtcccacacttggctactagtcccacagctgggcccatgcagcaccaccaccaagaggac
ccagggtttcaccttaaatctaatgaccactactaccaaccacctccccaaggtctcgat
gaagaccaatccttgaaccttcacatggaacgctaccagctgatgcactgggtaactcct
gaaaagctgattggacaccactccagcagtgatgcggagattgactcactcgcctgcatg
ctagctgatcaggacagccatacactaaacggcacacagctgtaccacaatgtgccttac
aacaaatacatattgggggaccactacagaccctcagcccagccaggagccccatctcag
ggagagccgtttatgggtttcccacctcagtccacggaccattctacacccccgaacccc
agtgatccccaccagggtctccagtacttcccccagccagatgacaacgacacccaggtc
tccaaatcctacccccagcctgtccctgcctcctacaataccacctccacccatactggc
ccaaggttcagttttcaggtcaaaacagcccaaactgtcacctacttccagactggtagg
caagctgggcaggcttacacccctcccccacaccgccagcatgcattgtggtccccgccc
aagaatcagactggcccccagggctggttccctccccaccctgcatcccaagtccaggag
ctgcactctgagaggggttacaaggggagtgccgcagggtttggagggagagctaaccag
tgcccgacatccaatggagtcacagaaactcaccagtcaggctcggcaccaagctccgcc
tatcagcccagcaagcaggggacagcagctccgaggccagaggaagagttgggccagccc
actaagaagtttgtgtatgacatgaatcatcccccgacagaggaagactttggttgctgt
gcacgttgcggtgacaaagtccttgacgacggcagcgactgtatcaccatggagcaggtg
tttcatgtggattgtttcacctgtgtcacctgccaggctcatctccgggggcaaccgttc
tacgctattgacaagcagagccactgcaggagctgttacattagtgtcctagagcgctgc
tgcatgtgctccaagcccatcctggaccgtgtcctgtggtccatgggcaatgcctaccac
ccgcgctgcttcaactgtgttgtgtgtggctgctgcctggacggcgtgcccttcaccgtg
gacgccacctcccagatccactgtatagacgacttccacaggaagtttgcccctcgctgc
tcagtgtgtggccaggccatcattcccggaccgggccaggatgagacgatcagtatagtg
gcgctggaccgcaacttccacgtcaactgctatgtgtgtgaggagtgtggtctgctcctg
tcctctgagggtgaggagcgatgctgttaccccctggacggtcacatcttgtgtaagggc
tgcagcgcccagcacatcctgaacccctcggccaaaatctcaactgactgctaa
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