Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139379505
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Entry
139379505 CDS
T10872
Name
(RefSeq) putative transcription factor Ovo-like 1
KO
K09216
ovo
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139379505
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
139379505
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GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_3rep
zf-C2H2_6
zf-met
zf-C2H2_16
Zf-C2H2_ZNF451
zf-C2H2_ZNF462_11
zf_C2H2_ZHX
DUF7630
zf-C2H2_7th_ZNF462
Zap1_zf1
zf-C2HC_3
Zn_Ribbon_YjdM
Motif
Other DBs
NCBI-GeneID:
139379505
NCBI-ProteinID:
XP_070978423
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All DBs
Position
21:49174597..49186389
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AA seq
330 aa
AA seq
DB search
MPRAFLVKKARYSPYKRNWSELPDDERGDVYIPVSVFPVPLLEETEASPAETAPRLATTT
HYEYTKYTHSVRSVMTPTAEMPSCTVLGQPQNPGRELEVTGLEVKRRAQSSTYVRSKIKV
TTGELPSQIPIPPQPSIPEITTTPVSLTTSPTALVSTVTKSGTGAQASFVCKMCQKVFQY
QRMLNRHLKCHSDTKRHLCNHCGKGFNDTFDLKRHVRTHTGVRPYKCSLCDKAFTQRCSL
ESHMKKIHGVTLQYAYKERRNKLYVCEECGHTAPSQDTLLKHYHALHPNSAFLRGKGLKG
GRGAEGEESMPGSPLSNDQDSDDTTGSGVQ
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgagccttcctggtaaagaaggcgagatactcgccctataagcggaactggagc
gaattgccagacgacgagcgcggggacgtatatataccagtgtctgtcttccccgtgccc
ttattggaggaaactgaagccagtccagcagagaccgccccccgtctcgccacgacgacg
cactacgaatacaccaaatacacacactcggtgcgcagcgtgatgacccctacagcggag
atgccctcgtgcacggtgctgggtcaaccccagaaccctggtcgggagttagaggtcacg
gggttagaggtgaagaggagggcacagagcagcacctatgtccgctccaaaatcaaggtg
actacaggtgagctacccagtcagattccaatacctccccagccttccatccccgaaatc
accaccacacctgtttccttgacgacgtcccctactgccctggtctccacagtaacgaag
tcagggacaggtgctcaggcgtcgtttgtgtgcaagatgtgtcagaaggtgttccagtac
cagaggatgttgaaccgacacctgaagtgtcacagtgatactaagagacacctgtgtaac
cactgtggtaaaggatttaacgacaccttcgacctgaagagacacgtcagaacacacaca
ggagtgcgtccctacaagtgctctctgtgtgacaaggccttcacccagcgatgctctcta
gagtctcacatgaagaagatccacggtgtgaccctgcagtacgcctataaagagagacgc
aacaaactctacgtctgcgaggagtgtggccacaccgccccttcccaggatacactgctc
aaacactaccacgccctccatcccaactccgccttcctgagggggaaggggctgaaaggg
gggagaggggcagagggggaggagtcgatgcctgggtcgccgctttcgaatgatcaggat
agtgatgatactacagggtctggggtgcagtag
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