Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139379524
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Entry
139379524 CDS
T10872
Name
(RefSeq) F-box only protein 41-like
KO
K10316
F-box protein 41
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139379524
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
139379524
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GFIT
Motif
Pfam:
zf-C2H2_FBX41
F-box-like
DUF6825
LRR_At5g56370
NET2A_C
Motif
Other DBs
NCBI-GeneID:
139379524
NCBI-ProteinID:
XP_070978444
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Position
21:51701523..51742415
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AA seq
871 aa
AA seq
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MASCDLPYFCPRCGDDKRFDSVPALRSHLVSRHTYETLLVLSQARARSSSPGTLLPLLPH
AVAQPKHPVLGSERERLPFPLACLDLASSSASTQLLIEMLTRRDQGGGSSGPGNSAGPVA
TSSSTAPPHSTTALVLPGCRGDNLPDLGLRGLDRRWLGPSLGLEFGLCLDESLTLGLGID
ERLGVERSIARTFAEVEERVSQHVGCLRAELERREAELEHERQDAARLEREKEELEDQAS
HLSRQVAVSVEMMATLKRDLQGKDQELCRKQQEVCDIERFLTATAEREAEAKLQLQTFIE
ALLERADRAERKLQLLVATDRHAHNDDRHTHNDDRHTHNDDRHTHNDDRHTHNDNSRTYN
NDSHSHNGTNGHRTNGHAHNGSEDDIITGSKLIGYRRSYSVSGSHRLGDQIYHNNYGAPA
GRMRTLSLGSGGWDSDSVGGWATPLEARYYHVPCSTREGGERKDRGYRRTPEGRGGWGRT
RWRAPPSTEEEEEEDDEEEDTWSEAWSTPETQRHAHVRLEHSPGSGVSSIRSSPCHRGYI
ALGAGTLRLRAGLFCVFPYLDVRTLLLAAEVCSDWRFVARHPAVWTRVRLENARVSAKFL
VTMSQWCTQTHSLVLQNLRPRLRHRDERREDYDKTTRGSLEGGVEALLRSAGGSLMVLRV
SHCPHVLTDRSLWLASCYCRNLQHLTYRSSSDPMGHEVVWALGAGCRNMTSLQVAPLHPC
QQPTRFSNRCLQTIGRCWPHLRVLSVGGAGCSIQGLSLLVRRCVGLQVLELECVTEVVQE
GAAELCREGLQNLETLLLTSTPVTPEALLHFNSVCCNLRSIIVQIGIADHFEEPDSPEAK
RQYNEMVNKLQALKKRPGLSEVLQIKADVFV
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatgtgacctcccgtacttctgccctcgctgcggagacgacaagcgtttcgac
agcgtacctgccctccggtcccacctggtcagccgacacacctacgagaccctcctggtt
ctgtctcaggcccgggccaggagctccagcccaggaactctgctaccactcctcccccac
gccgtggcccagccgaagcaccccgtcttgggttcggagagggagagactccctttcccc
ctggcctgcctggatctagcgtcctcctctgcctccacccagctactcattgagatgttg
accaggagagaccagggaggagggtcatctggtcctggtaattctgctggtcctgtagct
acctcctcctctactgcacctcctcacagcaccacggccctggtcctgcctggctgcagg
ggagacaacctgcctgatttggggctgagaggcctagaccgccggtggctggggccaagc
ctgggcctggagtttgggctctgcctggacgagagcctcactctggggctggggattgac
gagaggctgggggtggagaggagtatcgccaggacgtttgccgaggtggaggagagggtg
tcccagcatgtgggctgtctgagggcggagctagagcgtcgagaggcggagttagagcat
gagaggcaggatgcggcgcggctggagagggagaaggaggagctggaggaccaggcttcc
catctctcccggcaggtggcggtctccgtggagatgatggccactctgaaaagagacctg
caggggaaggaccaggagctgtgtcgcaagcagcaggaggtgtgtgatattgagcggttc
ctgacagccacagcagagagagaagcagaggctaagctgcagctgcagaccttcatagag
gctctgctggaacgggccgaccgggcagagagaaaactgcagctactggtggctacagac
agacacgcccacaacgatgacagacacacccacaatgatgacagacacacccacaatgat
gacagacacacccacaatgatgacagacacacccacaatgataatagccgtacatacaat
aacgatagtcactcccacaatgggaccaatggccacaggaccaatggacacgcccacaac
gggagtgaagacgacatcatcacagggtcaaagttaattggctacaggagaagctacagt
gtatctgggtcacacagactaggagaccagatctatcacaacaactatggagcccccgct
ggtcgtatgcggacgctgtcccttggttctggggggtgggacagtgactcggtggggggg
tgggccacacctctggaagcccgttactaccacgttccctgctctactcgagagggagga
gagaggaaggacagggggtacaggcgaaccccagaggggaggggagggtgggggcggacc
aggtggagggcgccccccagcacagaggaagaggaggaagaggatgatgaagaggaggac
acatggtcagaggcctggagcacacctgagactcagagacacgcccacgtcaggctggaa
cactcacctggctcaggtgtgtcgtccatacgatccagcccgtgtcaccgtggttacata
gcattgggggcggggactctgagactgagggcggggttattctgtgtgtttccttatttg
gatgtgcggacgttgctgctcgccgccgaggtgtgctccgattggaggtttgtggcacga
cacccagccgtctggacacgggtgcgactggagaacgccagagtctccgctaagttccta
gtgaccatgtcccagtggtgtactcagactcattccctggtgctccagaacctcagacca
cgactgcggcatcgagatgaacgcagagaagactacgacaagaccacacggggcagtctg
gagggaggtgtggaggcgttgctgaggtcagcgggaggcagtctaatggttctcagagtg
tctcactgtcctcacgtcctgactgaccgctccctgtggctggccagctgctactgtagg
aacctacaacacctcacatacaggagttcatcagaccccatgggtcatgaagtggtgtgg
gctctaggagcaggctgcagaaacatgacatccctgcaggtggcgccactacacccctgt
cagcagcctacccgcttcagtaaccgatgcctgcagacgattggccgctgttggccacac
ctccgagtgctcagtgtgggcggggctggctgtagcattcagggattgtccttactggtt
cgtaggtgtgtgggtctccaggtgttggagttggagtgtgttactgaggtggtccaggag
ggggcagcagagctgtgtagagaaggactacagaatctagagactctactactcacctct
actcctgttacacctgaagcactactgcactttaacagtgtatgttgtaacctcaggtcc
atcatagtgcagattgggatagctgaccactttgaggagccagacagtcctgaagctaag
agacagtacaatgagatggtcaataagttacaggccctaaagaagagaccaggtctgtct
gaagtgttgcagatcaaagctgatgttttcgtttga
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