Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139379527
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Entry
139379527 CDS
T10872
Name
(RefSeq) leucine-rich repeat neuronal protein 3-like
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139379527
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
139379527
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
Ig_3
I-set
LRR_9
ig
LRR_1
Ig_2
fn3
LRR_EndoS
LRR_Zer-1
LRRCT
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
139379527
NCBI-ProteinID:
XP_070978447
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All DBs
Position
21:complement(52410564..52414434)
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AA seq
706 aa
AA seq
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MKDVSFVDCFFVGLAMTAFVLASEERVDCPQLCVCEIRPWFSPSSVYMEAPIVDCNDLGL
FTLSGRLPTDTQVLLLQTNNIAKIERPLDYLANITEIDLSQNNLSSMSDIHLGRLPQLLS
LHMEENWIRQLPDSCLAELANLQELYMNHNLISSISPTAFQGLHNLLRLHLNSNKLQTIS
SEWFDTIPNLEILMIGENPITSVQDMNFKPLRNLRSLVLTRMNLSQLPDGALSGLDNLES
ISFYDNTFPEVPHAALRNLKNLKFLDLNKNPIGRIQRGDFADMLHLKELGINSMPELVSI
DSFALNNLPELTKIEATNNPRLSYIHPNAFYKLPRLETLMLNGNALSALHRITVESLPNL
REVSMHSNPIRCDCVVRWMNMNKTNIRFMEPDSLFCVEPPEYEGQHVRQVHFREMTEICL
PLISPESMPGHVSVDNGSSVSLHCRAFAEPEPDIYWITPSGTRVLPNTVSDKYYMHSEGT
FDIYDVTENEAGLYTCVAHNLVGADLKSVSVEVDGYFPRPANGSLDVNIKSVQSNSVLVA
WKAAHGGLAPNIKWYKASDPNHPTMAFTARVPSDVKVYNLTHLTPATQYKVCVDIRGILY
KHDTKCVNVTTKGLELAAKDTEKWHAAVIAVFGVLLAVISVACLLIYVSLRNHHLCGDLR
KCHSKVSLTQVAGLHSPFTRLWVSGNGLPTAVEVKPTVINVSDNAF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacgtgtcatttgtagattgtttcttcgtgggccttgccatgactgcctttgtt
ctggcctctgaggagagagtcgattgccctcagctatgtgtgtgtgagatcagaccctgg
ttctctcccagctccgtgtacatggaggccccaattgttgactgtaatgacttgggactt
ttcactctgtctgggagattaccaacggacacacaagtgctattgctgcagaccaacaac
attgcaaagattgagagacctttggattacctggccaacatcacagagattgacttgtcg
caaaacaacttgtcctcaatgagtgacatccacctcgggcggctgcctcagctgctgtcc
ttgcacatggaggagaactggatacgccagctgccagatagctgtctggcagagctggcc
aaccttcaggagctttacatgaaccacaacctgatctcctccatctcccccacggcgttc
cagggtctccacaacctcctccggctccacctcaactctaacaagctgcagacgatcagt
agtgagtggttcgacaccatacccaatctggaaatactcatgattggggagaatccgatc
acctccgttcaagacatgaacttcaagccacttcgtaatctccgaagtctagttctgacc
aggatgaacctatcgcagttacccgacggcgctctatctggcctcgacaacttggagagc
atctcgttctacgacaacaccttccccgaagttccccacgcagctctgaggaacttaaag
aacctcaagtttctggatctaaacaagaatcccatagggaggatacagcgtggagatttt
gcagacatgctccacctcaaagagctgggcattaacagcatgccggaactggtctctatc
gacagcttcgccctcaacaacctccccgaactgactaagattgaggccaccaacaacccc
aggctctcttacatccatcccaatgctttctacaaactgcccaggctggagacattgatg
ctgaatgggaacgcgctcagtgccctgcacaggattaccgtggagtccctccccaacctg
cgggaggtgagcatgcacagcaaccccatccgctgcgactgtgtggtccgctggatgaac
atgaacaagaccaacatacgcttcatggaaccagattcactcttctgcgtcgagcctccc
gagtacgagggccagcatgtccgacaggtccacttcagggagatgacagagatctgtctg
cctctcatctctcctgagagcatgcccgggcacgtcagcgtcgacaacgggagttctgta
tcgcttcactgccgggcctttgccgaacccgaaccggacatctactggatcacaccttct
ggtaccagggtcctgcccaataccgtttcagataaatactacatgcactcagagggaacg
tttgacatctacgatgtaacagagaacgaggctggactgtacacctgcgttgcccacaat
ctggtcggcgcagacctaaagtcagtctcggtggaggtggatggatacttcccccgacct
gccaacggctctttggacgtcaacatcaaatcagtgcagtccaactcggtactggtggcc
tggaaagccgcccatggtggtctggctcctaacataaagtggtacaaggcttccgacccc
aaccacccgaccatggcattcactgcacgcgtaccgtctgacgtgaaagtgtacaatctc
acacatctgactcctgccacccagtacaaggtgtgtgtggacatccgcggcatcctctac
aaacacgacaccaaatgtgtcaatgtcaccacaaagggattagagctggcggccaaggac
actgaaaagtggcacgctgcagtaattgctgtctttggtgtgcttctcgctgtgatttca
gtggcctgtctgcttatttatgtgtctctgaggaaccaccacctttgtggggatttaagg
aaatgccactccaaagtgtctttgacgcaggtggccggcctgcactctccttttacgagg
ctgtgggtctcagggaacggactgccaactgcagtggaagtgaaacccacagtcataaat
gtatctgacaatgccttttaa
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