Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380198
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Entry
139380198 CDS
T10872
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03015
mRNA surveillance pathway
ocla04261
Adrenergic signaling in cardiomyocytes
ocla04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139380198
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
139380198
09158 Development and regeneration
04382 Cornified envelope formation
139380198
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocla01009
]
139380198
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139380198
03036 Chromosome and associated proteins [BR:
ocla03036
]
139380198
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
139380198
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
139380198
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
139380198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
P2R3B_EF-hand
EF-hand_13
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
139380198
NCBI-ProteinID:
XP_070978760
LinkDB
All DBs
Position
22:4379833..4439155
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AA seq
580 aa
AA seq
DB search
MEVNNMPSPQVLQPVLKMKVDELFLNWLSEPTTQTILKDYLGLIKSGQSIDLGLGDTKDK
RSMTFNENNNVASKRSLTERSSAPLGAPSSPPSTHTLPSGSSGNARVVGPNGRALRRSVS
TKKAQVKSEAPVPTALSESIPKFYFPRGRPKANLNIDGLIAKIEKIFSQFPNERATIEDM
GKVAKACECPLYWKAPLFNSAGGDRTGFVSVHKFVAMWRKMLQTCHDDVSKFVHLLAKPG
CNYLEQEDFIPFLQDVVNSHAGLAFLKEASDFHSRYITTVAQRIFYNVNRSWSGRISCSE
LRKSSFLQNVALLEQEEDVNQLTEFFSYEHFYVIYCKFWELDTDHDLYIDQRDLARHNDQ
AISHKMIERIFSGTVTRDRRLRKDGRLSYADFVWFLISEEDKKTDTSIEYWFRCMDLDGD
GVLSMYELEYFYEEQCVKLETMAIEPLPFEDCLCQMLDLVKPEVEGKITLRDLKQCKLSH
IFYDTFFNIEKYLDHEQKDPFSVVREAETEGQEISDWEKYAAEEYDILVAEETTTDQYND
GFDNALSHISSELCLRTEERHFFKIPNPHCNLDLDEDDFE
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggaggttaacaacatgccatcgccacaagtcctgcaaccggtgcttaaaatgaaagtg
gatgagctcttcctcaactggttgagtgagccaacgacccagacgatactcaaagactac
ctcggcctgatcaagagtggacagagcattgacctggggcttggggacactaaggacaaa
aggtcgatgaccttcaatgagaacaacaatgtggcgtccaagagaagtctgacggagagg
tcttctgcacccctcggtgcgccttccagccccccctctacacacacactaccctctggg
agcagtggtaatgccagagttgtgggacccaatgggagggcgctacggaggtctgtcagc
actaaaaaggcccaggtgaagagcgaggcgcctgttcccacggcgctgagtgaaagcatt
ccaaagttctactttccgcgggggcggcccaaagccaacctcaacatcgacggcctcatt
gctaagatcgagaaaatattttcccaattccccaatgaaagggccaccattgaggacatg
gggaaggttgccaaggcgtgtgagtgtcctctctactggaaagctccattgttcaattcg
gctggaggcgataggacgggcttcgtgtccgttcacaagtttgtggccatgtggagaaaa
atgctgcagacctgtcatgacgacgtgtctaagtttgtacacctcttggccaaacctggc
tgtaattacctggaacaagaggactttattccattcctgcaggatgtggtgaactctcac
gcaggcctggccttcctgaaggaggcgtccgacttccactcacgctacatcaccacagtt
gcccagaggatattctacaatgtgaacaggtcatggtcaggcaggatcagctgttcagag
ctcaggaaaagcagttttctccagaacgtggccctgctagagcaggaggaggacgtgaac
cagctaacagagttcttctcctacgaacatttctacgtcatctactgcaagttctgggag
ctggacacagaccatgacctatacatagaccagagagacctggcccgacacaacgaccaa
gctatctcccacaagatgattgaaagaatattttctgggacagttaccagggatagacgt
ctgcgtaaagacggcaggctgagctacgctgactttgtctggttcctcatctccgaagaa
gacaagaagactgacaccagtatagagtactggttccggtgtatggacctggatggggac
ggtgtgttgtctatgtacgagctggagtatttttatgaggagcagtgtgtgaagttggag
accatggcaatcgagcccctgcccttcgaggactgtctctgtcagatgctcgacctggtc
aagccggaggtcgagggaaagatcaccctacgggacctgaagcagtgtaagttgtctcac
atcttctatgacaccttcttcaacatcgagaaatacctggaccacgagcagaaagacccc
ttctctgttgtaagggaggctgagacagagggccaagagatctcggactgggaaaaatat
gcagcggaggagtacgatatcctggttgccgaggagactactactgatcagtacaacgat
gggtttgacaatgctctgagtcacatctccagtgaattgtgtctgaggacagaggagaga
catttctttaaaatccccaaccctcactgcaatctggacttggatgaggacgactttgaa
taa
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