Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380222
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Entry
139380222 CDS
T10872
Name
(RefSeq) matrilin-2-like
KO
K19467
matrilin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139380222
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
139380222
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Gene cluster
GFIT
Motif
Pfam:
VWA
FXa_inhibition
cEGF
VWA_2
EGF_CA
EGF
EGF_LRP2
Matrilin_ccoil
hEGF
EGF_3
Sec23_trunk
Plasmod_Pvs28
DUF4215
Motif
Other DBs
NCBI-GeneID:
139380222
NCBI-ProteinID:
XP_070978849
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All DBs
Position
2:complement(20497532..20511585)
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AA seq
681 aa
AA seq
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MRTLAFALFCLLCCDAVRVDHRDRRRPRPSVLSRGRNDSAVQSNSVESLCKGKPLDFVFI
IDSSRSVRPSDYEKVKIFITNILAFLDVGPEATRVGLLQYGSVVQNEFSLNTYSSKADVE
RAVKAMDHLATGTMTGLAIQYTMETAFTEPEGARPADLHIPRIAMIITDGRPQDTVEEVA
AQARQAGIQIFAIGVGRVDMNTLRVIGSEPHSEHVYLVANFSQIETLTSVFQSNLCGGTD
LCSVMDHPCDHLCVSTPASYMCRCRKGYTLNSDGKTCHAEDPCDVVDHGCAHICAKVPGV
LGYECRCRLGYELNEDERTCRRIDYCDLGNHGCQHDCVSSPESYVCRCTRGYVLNRDGKT
CSKIDHCALGDHGCEHECVNTEDVFFCKCNEGYILRPDNKACKKLDPCFLGNHGCEHDCV
NTEDSFVCRCREGYKLRPDHRTCQKAVCGDGVMDLVFVIDGSKSLGPANFELVKQFVNGI
VDSLDVSGTGTHVGLLQYSSKVRTEFILGQYTSGRDINRAVLQMQYMGRGSMTGAALRHM
FEYSFSAKEGARPDIPRVSIVFTDGRSQDDVSKWASKAKDAGITIYALGVGKAIEEELRE
IASEPDDKHLYYAEDFSNMGEITDKLKSRICKEKPSPQDMCKCENVMLFQRQVNEQLRRL
TQNIEVVSERMETLENQLGHK
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgaggactctggccttcgcgctcttttgcctgctctgctgcgatgcagtccgagtggac
cacagagacagacgccgtcccagaccatccgtcctgtccagaggacgcaacgactcggcc
gtccagtccaactcagtggagagcctgtgtaaagggaagcccctggattttgtgttcatc
atcgatagctcccgcagcgtgcgtcccagcgactacgaaaaggtcaagatcttcatcacc
aacatcctggccttcctggacgtggggccggaggcgacgcgcgtcgggctgctgcagtac
ggcagcgtggtgcagaacgagttctccctcaacacctacagcagcaaggcagatgtggag
cgggcggtgaaggccatggaccacctggccaccggcaccatgaccggcctggctatccag
tacaccatggagacagccttcaccgagccagagggcgcccgacccgccgacctgcacatc
ccccgcatcgccatgatcataacggacgggcgcccccaggacacggtggaagaggtggcg
gcacaggcccggcaggcaggcatccagatattcgccatcggagtgggcagggtggatatg
aacacgctgcgggtcatcgggagtgagccccactcggagcatgtgtacctggtggccaac
ttcagccagatagagaccctcacctccgtcttccagtccaatctatgtggaggtacagat
ttgtgctctgtgatggaccatccgtgtgatcacctctgtgtgagcaccccagcctcctac
atgtgccggtgtagaaagggttacacccttaactctgatggcaagacctgccacgcggaa
gacccgtgtgatgtggtggaccatggctgtgcccacatctgtgccaaggtgccaggggta
cttggctacgagtgtcgctgccggcttgggtatgaactcaacgaggacgagaggacgtgc
cgaagaatagattactgtgacctggggaaccatggctgtcagcatgactgtgtcagctct
cctgagtcctacgtctgtagatgcacgaggggctatgttctcaaccgcgatggcaagacc
tgcagcaagattgaccactgtgctcttggcgaccacggctgtgaacatgagtgtgtgaac
actgaagatgtatttttctgtaaatgcaatgaaggctacatactcagacctgataataaa
gcctgcaaaaagcttgatccctgtttccttggtaaccatgggtgtgagcatgactgtgtg
aacactgaagattcatttgtgtgtagatgtcgagaaggctacaaactcagacctgatcac
agaacctgccagaaggcagtgtgtggagatggagtgatggatctggtatttgtaattgac
ggctctaagagcctgggaccggccaactttgagctggtcaagcagtttgtgaacggcatc
gtggactctctggacgtgtccggcacgggcacccacgtggggctgttgcagtactccagt
aaggtccgcacagagttcatcctgggtcagtatacctcaggccgggacatcaacagggcc
gtattacagatgcagtacatgggcagaggatccatgacgggtgctgccctgcgtcacatg
tttgagtacagcttctctgccaaggagggggccaggcccgacataccacgggtcagcatc
gtgttcaccgacggacgatcccaggatgatgtgtcgaaatgggcctctaaggcaaaggat
gctggtatcacgatatatgcacttggtgttggtaaagccatcgaagaggagctcagggaa
attgcttccgagccagatgataagcatttgtactatgctgaagattttagcaacatggga
gaaattacagacaaattgaagtcacggatatgtaaagagaaaccctcccctcaagatatg
tgtaagtgtgagaacgtgatgctcttccagaggcaggtcaacgaacagcttagaagactg
acccagaatattgaggttgtgtcagaaaggatggagacccttgagaatcagcttggacac
aaatga
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