Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380305
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Entry
139380305 CDS
T10872
Name
(RefSeq) protein O-mannosyl-transferase TMTC4 isoform X1
KO
K23424
protein O-mannosyl-transferase [EC:2.4.1.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ocla01003
]
139380305
Glycosyltransferases [BR:
ocla01003
]
O-Glycan biosynthesis
O-linked Man type
139380305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TMTC_DUF1736
TPR_2
TPR_17
TPR_8
TPR_11
TPR_16
TPR_12
TPR_14
TPR_10
TPR_19
TPR_CcmH_CycH
TPR_Slam
TPR_9
TPR_NPHP3
ARM_TT21_C
TPR_15
FAT
CbiM
TMEM18
EST1_DNA_bind
DUF7118
VCD
Motif
Other DBs
NCBI-GeneID:
139380305
NCBI-ProteinID:
XP_070978996
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Position
22:complement(2794983..2838825)
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AA seq
742 aa
AA seq
DB search
MAQTEINWDQQIPLPKLSPFHAKIAVALVALLCFINSYDGDFVFDDSEAIVNNKDLIPST
PLNNIWRNDFWGSNLSSNNSHKSYRPLTVLTFRLNYLMAGGLHPVGFHVLNIGLHSLISA
LMIDMFSVLIGGLAYDGNGNRLNHAPKASLLAGLLFAAHPVHTESVAGIVGRADLLCALF
FQLSFLTYCKAFRGGRESEEKFSIHWIAVSLLLCAAAMLCKEQGITVLGVNAAFDVLLIC
NVNVYELSQRLFLRRKAEDVSERVRTGLLIRLALLAMGGASLLYARWRIMGTGPPAFTEV
DNPASFADNVFLRIVNYNYYYSLNAWVLLCPWWLCFDWSMGCVPLIKSAFDWRTAWLLLL
WCFLIGLISQALCSQDSQRRRTLTLGLVLLVVPFLPACNIFFRVGFVIAERVLYLSSAGY
CLLLAYALGHCCGRWSRCKGLLRASLLALLCVYVARCALRSHQWRSEQSLFTSALSVCPL
NAKVHYNVGKNLADRGNTSAAIKYYREAVRLHPTYVHAMNNLGNILKERNKLVEAEELLA
KAVLVQPDFAAAWMNLGIVQNSLKKFKEAEQSYWNAIQFRKKYPDCYYNLGRLYADLNRH
LDALNAWRNATVLKPDHSLAWNNMVILLDNTGNLAQAEAIGREALKLLPNDHTIMFSLAN
VLGKLQKYKESEGFFLQALRINPNAASCHGNLAVLYHRWGKLELAKKHYELSLKLDPEAP
GTRDNYNMLRRKLDQLYRTTPP
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcacagactgaaattaattgggaccaacagatacctttaccaaagctttccccattc
catgccaagatcgctgtggcactagtggcactgctctgcttcatcaatagctatgatgga
gactttgtgtttgatgattctgaagccattgtcaataacaaggacctgatcccatccacg
cctctcaacaacatctggagaaatgacttctggggaagtaacctgagcagcaacaacagc
cacaagtcctacaggccgctcactgtcctcacttttaggcttaactacctcatggctggt
gggctgcacccagttggcttccatgtgctgaacatcggcctgcacagtctcatatcagcg
ctgatgatcgacatgttctccgtactgatcggtggcttggcatacgatgggaatgggaac
aggctcaaccacgcacccaaagcttctctcctggctggtcttctctttgcagcgcacccc
gttcacaccgaaagcgtggcagggattgtaggccgggcagacctactttgtgcactgttc
ttccagctctcctttctgacctactgcaaagccttcagaggaggtagggagagcgaggag
aagttttccatccattggattgccgtgagcctcttgctgtgcgctgcggccatgctctgc
aaagaacaaggcatcacagtcctgggggtgaacgctgcctttgatgtccttctcatctgt
aatgtaaatgtctacgagctgagccagaggctgttcctcagaaggaaagcagaagacgtg
agtgagcgggtgcggacgggcctcctgatccgattggctctgctggccatgggcggagcc
tccctgctgtacgcccgctggagaatcatgggaactgggccccccgccttcactgaagta
gacaacccagcatcctttgcagacaatgtctttctcagaatagtcaactataattactac
tactcactgaatgcctgggtgctgctgtgtccctggtggctgtgttttgattggtccatg
ggctgtgtgcccctcattaagtcagcgtttgattggaggacggcctggctgctgctgctc
tggtgcttcctgataggcttgataagccaagccttatgctcacaggacagccagaggagg
aggacgttgaccctgggtctggtgctgctggtagtccccttcctgcccgcctgcaacata
ttcttcagggttggcttcgtcattgcagagagggtcctctacctctcctccgctggctac
tgtctgctactggcctacgccctgggacactgctgcggccgctggagcagatgcaagggg
ctgctccgtgcctccctgctggccctgctatgtgtgtatgtggctcgctgtgccctgcgc
agtcaccagtggcggtccgagcagagcctcttcaccagcgccctgtcagtctgtccactc
aatgccaaggtgcattataatgtgggtaagaacctagcagacagagggaacaccagtgct
gccatcaagtactacagagaggcagtcaggttgcaccctacgtatgtccacgctatgaac
aacctaggcaacatcctgaaagagaggaacaaattggtggaggcagaggagcttctggca
aaagctgtactcgtacagccggactttgcagcagcgtggatgaatctgggaatagtgcaa
aacagtctgaagaagtttaaggaagcagagcagagctactggaacgccatccaattccgg
aagaaataccctgactgttactacaacctgggacgcctgtatgcagacctgaacagacac
ctagatgctctgaatgcgtggaggaatgctacagtgctaaagcctgaccacagcctggca
tggaacaacatggtcatactactggacaacactggcaacctagcccaggcggaggcaatt
ggccgagaggccctaaagctcctccctaacgaccacaccatcatgttctcattggccaac
gtcctgggcaaactacagaagtataaggagtccgaaggcttcttcctccaggctctgagg
atcaacccaaatgctgccagttgccatggcaatctggcggtgctgtaccatcgctggggg
aagctggagctggcgaagaagcactacgagctgtctctgaagctggatccagaagcccca
ggcacccgggacaactacaacatgctgcgacgcaaactggaccagctttacaggaccaca
ccaccctga
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