KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380315
Entry
139380315         CDS       T10872                                 
Name
(RefSeq) transcription factor Sox-21-B-like
  KO
K09267  transcription factor SOX1/3/14/21 (SOX group B)
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ocla03000]
    139380315
Transcription factors [BR:ocla03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    139380315
SSDB
Motif
Pfam: HMG_box HMG_box_2 SOXp HMG_WDHD1
Other DBs
NCBI-GeneID: 139380315
NCBI-ProteinID: XP_070979013
LinkDB
Position
22:complement(43361126..43362314)
AA seq 241 aa
MSKPMDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKFAFPVPYNLGEHDALKVSGLSHGALSEHL
LGNPDKAAAAAAAARVFFNPSMSTNPYSFFELGSKMSELSSPSFPYPSLGYPGGTAFSGT
GGVGGTHTHTHSHPAPGNPGYMIPCNCTGWPSAGLQPPLAYILLPGMGKPQLDYPAYAAA
L
NT seq 726 nt   +upstreamnt  +downstreamnt
atgtctaaaccaatggatcacgtaaaacgaccgatgaatgccttcatggtttggtccaga
gcgcagagaagaaaaatggctcaggagaacccaaaaatgcacaactccgaaatcagcaaa
agattgggagcggagtggaaacttctcactgagtcggagaaaaggccattcattgacgaa
gctaaacgactgagagccatgcacatgaaggagcaccctgactataaatacagacctagg
cgaaagccaaagactctgatgaaaaaagacaagtttgccttcccagtgccctacaatctt
ggggagcacgacgcgcttaaagttagcggtttatctcatggagcactttccgaacaccta
ttagggaaccccgacaaggcggcagcggcggccgcagcagcgagagtctttttcaacccg
tccatgtccacgaacccctattcgttttttgagctcggatcgaagatgtcagagctatcc
tcgccctcgtttccttacccatctctgggctaccctggtggcacggctttctctggaact
ggcggtgtcggtggaactcacacccacactcactctcatccagccccgggcaacccaggc
tacatgatcccctgtaactgtacgggctggccctctgcgggtctccagccaccgttagcc
tacatcctactccccgggatgggcaaacctcaacttgactaccctgcatatgcagcggca
ttatga

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