Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380344
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Entry
139380344 CDS
T10872
Name
(RefSeq) homeobox protein Hox-D9a-like
KO
K09294
homeobox protein HoxB/C/D9
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139380344
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
139380344
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hox9_act
Homeodomain
Homeobox_KN
CI-B14_5a
Motif
Other DBs
NCBI-GeneID:
139380344
NCBI-ProteinID:
XP_070979059
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All DBs
Position
22:complement(45147898..45149050)
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AA seq
268 aa
AA seq
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MSTSSTLSNYYVDSIMGHEAEDVYRPRFVQSPHSTTSMPPGVGDNADFSSCSFAPKSAVF
PGSWSSVHTQSTAAVSGIYHPYVQSHLSAADSSRYVRSWIDPISNNVSFSGFHYNSRHYG
TNGTKPESLPLKRTESATFETETQVVVRGPGYACGLSECPKNVAKESVGSDTSNHSDPKE
EKKQLDPNNPAANWIHARSTRKKRCPYTKYQTLELEKEFLYNMYLTRDRRNEMARNLNLT
ERQVKIWFQNRRMKMKKMNRERGSKDHL
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccagtagcactctaagtaactattatgtggactctataatggggcatgaagca
gaggatgtgtacaggccacgctttgtccagtctccgcacagtacgacctcaatgccacca
ggtgttggggacaatgcagatttttcctcctgcagttttgcacccaaatcagccgttttc
ccagggtcttggtcctcggtccacacgcagtccaccgccgcagtatcagggatttaccat
ccttacgtccagtcccacctctccgcagcagacagcagcagatatgttcggtcgtggata
gacccaatttctaacaacgtttctttctccggctttcactataacagccggcattatgga
acaaatggaaccaagcccgaaagtttaccactgaaaaggactgagagtgccacttttgag
acagagactcaggtggttgtccgtggccctggttatgcttgtggattgtccgaatgtccg
aaaaatgtggccaaagagagcgttggcagtgatacttcgaatcacagcgaccctaaagaa
gagaaaaaacaacttgacccaaacaaccctgcagcaaactggattcatgcacgttcaaca
aggaagaagcgatgtccatatacaaaatatcagacactagaactggaaaaagaattcctt
tacaacatgtatttgacacgagatcgacgaaacgaaatggctcgaaatctcaatttaact
gaaagacaggtcaaaatctggttccagaacagaagaatgaaaatgaaaaagatgaacaga
gagaggggcagtaaggatcacttatag
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