Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380370
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Entry
139380370 CDS
T10872
Name
(RefSeq) fer-1-like protein 6
KO
K22127
fer-1-like protein 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139380370
Membrane trafficking [BR:
ocla04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
139380370
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
Ferlin_C
FerB
dsrm_Ferlin
FerI
dsRBD2
Motif
Other DBs
NCBI-GeneID:
139380370
NCBI-ProteinID:
XP_070979090
LinkDB
All DBs
Position
22:50450594..50516484
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AA seq
1843 aa
AA seq
DB search
MDKDPSGHSGSPATHRKGKGMFGLKVKKRKKTVTTSDLVLANKAALDGTEPEGNAEVTGL
LEGQYPDDGQPGPSGTIPVRQLPQTKRSKLRPKILDSEKKPQTFQIAINITEAKQLVGEN
IDPSVIMEIGDEKKQTTVKEGTNAPFINEYFVFDYYGHQESFFDKVIKLSVMHTKIMKGF
CVGSFKMDVGTVYRQPGHQFTNKWAVLTDPADIRTGVKGYLKCDISVMGKGDAIQPSQKT
SDAEEQIDKNLLVPEGFPSERPWARFYVKVYRAEGLPRNNSSIMANVTKAFIGDNTALID
PYVVVSFFKQMGRTATQKSTADPEWNEQIIFTEMFPPLCQRLKIQVWDEGSMNDVAIGTH
YIDLRRISNKQDGDKGFLPTFGPAWVNIYGSARNFSMVDDNPELNEGVREGVSWRGRVYL
ELSVEILSGGGGGGESKLSRLVKPLKDTKAGKATGKDPKGAGGAGGGAGEEEKAKAIGAE
VMPVESPPQLIDKDNFLLFGTVFEATMIDRKIGDKPINFELSVGNFGNVQEGSPQVSGRR
KVEKPVAERVWDGQDLDSTPLIDSQDPKPGLWQSPCQSTTPPEKPLTDGNRHYMYLPIQH
QKPCVHVMSCWEDRTYRLHSSNFLENIAVMFEEGVAKTDELNKLSDPGTEALMRQVFKEF
IMDARRFIAFAEGKVRMNHLTVLDKKRLTMCKQELESMVGKAETISEGKRKARSVKEMLQ
EAIKLTQKLRFLVEEPQHTIPDVFVWMLSNNKRVAYARISARDLIYSASPEERGKDCGKI
QTLFLKPPGKRVAGWSIQAKLDVYLWLGSCRDSSHVLDNLPGGFEPKGGATEEQLLPAIL
PVHLAYRDEHKFQMRAHMYQARGLIAADSTGLSDPFARVTFLTHSHTTAIINQTLTPTWN
QMLLMTRVTLHGDLAHLEQEPPCIVIEVYDDDALGKAEYLGSTVAVPVVRVSEQPYSPPQ
LQYSPLFSGFQSGGELLGAFELIQIPESGEEYLPALDEPDGQIYPVPGNIRPVLSRYRLE
VLFWGLRELKKVQLLSVDRPQVFIECAGKSLRSSVIQSYKTNPNFTTLVDAFDLELPENE
NLHPPLNISVVDWRAFGRSTVVGNYTINNLKPFKYTPPPALSAPTSPRGPDSREDLGMMP
QSNVDNVIPLSSEDVSINIYQEISPTPPPPPPPEPDKKEKDWRKSSRKSTKRRKRTVADE
SGDNVLDWWSKYYASVDKRQQAKQKEVHPFPYIYDNVTGQQDGDKKKKPILNVSQEGVSK
LATLQLYDKELESEFGPFDDWVNTFELFRGKANDEVGRSSEERFVGKFKGRFCLYKLTEE
DDEWEESPNSGQFKITRGIPPNTSVKVLIRVYIVSASNLHPADTDGKSDPYIVLRLGKTE
IKDRDNYIPKQLNPVFGRSFEIQATFPKDSLLTTLIYDHDTIGTDDLIGETCIDLENRFY
SRHRATCGLPTEYSIDGYNAWRDSTKPSELLTTLCKENRLDGPYFRPGKITIGGNVFAGK
TLFMDEEQTVESYEHLALKILHRWTEIPGVGCRLVPEHIETRTLYNKARPGMDQGQLQMW
VDMFPMDMPHPRPSVDISPRKPKGFELRIIIWNTEDVILEDTNILTGTQSSDIYVKGWLK
GFEDDRQETDVHYNSLTGEGNFNWRLVFPFNYLPAEKVVVVSKRGSIFSLDKTEQKLPAM
LVMQVWDFDRLSSDDFLGTVELDLHGFPRGAKSAKACKMDMLMDSVETISIFQQKRSRGW
WPFVKAGELTGKVEAEFHLVTSEEAEKNPVGRARKEPEPLEKPNRPDTSFSWFVNPFKCF
FHLIWRNYKKYIIIALVLLITALFIALLLYTLPAAISQKIVNG
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atggataaggatccatcaggtcacagtggcagtccagccacacacaggaaggggaagggg
atgttcgggctgaaagtgaagaagaggaagaagacagtcaccacgtctgatctcgtcttg
gccaataaagcagctctagatggtacagagccagagggtaatgctgaggtcactggtctg
ttagaaggacagtaccccgacgatggtcagcctggcccttcgggaaccatacctgtcaga
cagctaccccagaccaagaggtctaaactaagaccaaagattctggacagtgagaaaaag
ccacagacgttccagattgccatcaacatcaccgaggccaaacagctggtgggggagaat
attgaccctagcgtaatcatggagataggagacgagaagaaacagaccaccgtcaaagag
ggcaccaacgcccctttcatcaatgagtacttcgtgtttgattattacggccatcaagag
agcttttttgacaaagtcatcaaactatcagtgatgcataccaagatcatgaaaggcttc
tgtgtgggctccttcaagatggatgtgggaacggtctatagacaacctggtcaccagttc
accaataagtgggcggtgctgacggacccggcagacatcaggaccggggtcaaaggttac
ctgaagtgcgacatcagcgtgatggggaagggagacgccatacagccatctcagaagacc
agcgatgctgaggagcagatagacaagaacctgttggttcccgaggggttcccctcggag
cgtccctgggccaggttctatgtgaaggtgtacagagcggagggtctgcctcgtaacaac
tcctccatcatggctaacgtcaccaaggccttcataggggacaacacagccctcatagac
ccatacgtggtggtgtccttcttcaaacagatgggcagaacggccacccagaagagtaca
gcagaccctgagtggaacgagcagataatatttactgagatgttccctcctctgtgccag
cggctgaagatccaggtttgggacgagggcagtatgaacgatgtagccataggaacacac
tacatcgacctgcggaggatctccaacaaacaggacggggacaaaggcttcctccctacg
ttcggaccggcctgggtcaacatctacggttcggcccgtaacttctctatggtggatgac
aaccccgaactgaacgagggggtcagggaaggggtgtcgtggaggggcagggtgtacctg
gaactatctgtagagatactgtcaggggggggaggcgggggagagtccaagctgtcccgg
ttagtcaaacctctgaaggacaccaaggcaggtaaagcaacgggaaaggaccctaagggg
gcaggaggagcaggaggaggagcaggggaggaggagaaagccaaggccatcggggcggag
gtgatgccggtggagtctccacctcagctcattgacaaggacaactttttgctgtttgga
acggtattcgaggccacgatgatcgacagaaagatcggagacaaacccattaactttgag
ttgtctgttggtaactttgggaacgtccaggagggctctccccaggtcagcggtaggagg
aaggtggagaagccagtagcagagagggtgtgggatggtcaagatctcgacagtaccccc
ctgattgactcccaggaccccaaacctgggctctggcagtctccatgccagtccaccaca
cccccagagaaacccctcactgatggaaacaggcattacatgtaccttcccatccagcat
cagaagccttgtgtccatgtgatgagctgctgggaggatcggacataccgtcttcacagc
tctaactttctggagaacatcgctgtcatgtttgaagaaggcgtggccaagacagatgag
ttgaacaagttgtcagatccaggaacagaagctctcatgcgccaagtctttaaggagttt
atcatggacgccaggagattcatagcctttgcagaagggaaagtgagaatgaaccatctg
accgtgttggataagaaacgcctgaccatgtgtaaacaggagctggagagtatggtcgga
aaggcagaaaccatctcagaggggaagaggaaggctcgcagtgtgaaggagatgttgcag
gaggctataaaactcacacagaaactgagattcctagtggaagagccccagcataccatc
ccagatgtgtttgtgtggatgctgagtaacaacaagcgtgtggcttatgcccgcatctct
gcccgtgacctgatctactctgccagccctgaggagagaggcaaagactgtggcaagatc
cagactttattcttgaagcccccagggaagcgtgtagcaggctggtcaattcaggccaaa
ctggacgtgtacctgtggctgggcagctgcagagactcctctcacgtgctggataacctg
cctggagggtttgagcccaaagggggcgccactgaggagcagcttctacctgccatccta
cctgtacatctggcatatagagacgagcacaagttccagatgcgcgcccacatgtaccag
gctcgagggctgatagcagcagactctacaggactctcagaccccttcgccagggtcacc
tttctgacacatagccacaccacggccatcatcaaccagacgttaaccccgacctggaac
cagatgctgttgatgacccgggtcacgctgcatggagacctagctcacctggagcaggag
ccaccgtgcatcgtcatcgaggtgtatgatgacgatgctctgggcaaggcagagtacctg
ggcagcacggtggcagtgcccgtggtgagggtgtcagagcagccctactctcctccccag
ctccagtacagtcctctgttttctggattccagtctgggggagaactgctgggggccttt
gagctcatacagatcccagagtcaggagaagagtatctgcctgcgctggacgaaccagac
ggtcagatctaccctgtacctggcaacattagacctgtactgagcaggtatcgattagag
gtgttgttctggggcctgagggagctgaagaaggtgcagctcctgtctgtggaccgtccc
caggtgtttatagagtgtgctgggaaaagcctgcgctcctctgttatccagagctacaag
accaacccaaacttcaccacgctggtggacgccttcgacctggagctgcctgagaatgag
aaccttcaccctcccctgaacatcagtgtggtggactggcgagcattcggacgctccacc
gtggtgggaaactacaccatcaacaacctgaagcccttcaaatacacccctcctccagcg
ctgtccgcaccaacctcaccacggggacctgacagcagagaggatttaggtatgatgccc
cagtctaatgtagacaatgtaatccctttgtcatctgaggatgtctcaatcaacatctac
caggagatctctcctacacccccaccaccacctccacccgaaccagacaagaaggaaaag
gattggaggaagagctctcggaagtctactaagagaaggaagcgtaccgtagcagatgag
tctggggataacgtcctcgactggtggtccaagtactacgcctcggtagacaagagacag
caggccaagcagaaggaggtacatccctttccatacatctatgataatgtcactggacag
caggatggagacaagaaaaagaaaccaatattgaatgtctctcaggaaggtgtgtccaaa
ctggcaactctacagctctatgacaaggagttggagtcggagtttggtccgtttgatgac
tgggtcaacaccttcgagctgttcagagggaaagccaacgacgaggtggggcgttccagt
gaggagaggttcgttgggaagttcaagggtcgtttctgcttgtacaagctaactgaggag
gatgatgagtgggaggagagtccaaactcgggccagtttaagatcacccgagggatcccg
cccaacacctccgtcaaggttctcattagggtttacatcgtatcggcatccaacctccac
ccagccgatactgatgggaagtctgacccctacattgttctgaggctggggaaaactgag
ataaaagacagagacaactacatccccaagcaactcaacccagtctttggcaggtccttt
gagatccaggctacgtttcctaaagactccctgctgactactctgatctatgaccacgac
accatcgggactgacgatctgatcggggagacgtgcatagatctggagaaccgcttctac
agccgacaccgggccacctgcggcctacccactgagtacagcattgatggttataacgcc
tggagagactccaccaagccatctgagctgttgactacgctctgtaaggagaacaggcta
gatggaccctacttcagacctggaaaaatcaccatcgggggcaatgtcttcgctgggaaa
acactgtttatggatgaagagcagacggtggaatcctacgaacatctggctctgaagatc
cttcacagatggactgagattccaggggtggggtgtagacttgtcccagagcacatcgag
acacggactctgtacaacaaggccaggcctggcatggaccagggccagctccagatgtgg
gtggacatgttccccatggatatgccccacccacgcccctctgtggacatctcccctcgt
aaacctaaagggtttgagttgagaatcatcatctggaacactgaagatgtgattctggag
gacactaacatcctcacaggaacacagtctagtgacatctacgtcaaagggtggcttaag
ggctttgaggacgatcgccaggagactgatgttcactacaactctctgactggggagggt
aacttcaactggcgcctggtgttcccctttaactacctgcctgccgagaaggtggtggta
gtcagtaagagggggagcatcttctccctggacaagacagagcagaagctaccggccatg
ttggtgatgcaggtctgggactttgacaggctgtcgtctgatgatttcttgggtacagta
gagctggacttacatgggtttcctcgcggggccaagtcagccaaggcctgcaaaatggac
atgctgatggacagcgtagagacaatctccatcttccaacagaagaggtccaggggctgg
tggccctttgtcaaggccggggaactcacggggaaagtagaggcggagttccacctggtg
acatcagaggaggcagagaagaatccggttggtcgagcccgcaaggagcctgaacccctg
gaaaaacccaaccggccagacacgtcattctcgtggtttgtgaacccttttaagtgcttc
ttccacctgatctggaggaattataagaagtacatcatcatcgctctggtcctgctcatc
acagctctgttcatcgccctgctgctctacaccctgccagcagccatctcacagaagata
gtcaatggttaa
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integrated database retrieval system
