Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380432
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Entry
139380432 CDS
T10872
Name
(RefSeq) lanosterol synthase
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00100
Steroid biosynthesis
ocla01100
Metabolic pathways
Module
ocla_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
139380432
Enzymes [BR:
ocla01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
139380432
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
DUF7374
Motif
Other DBs
NCBI-GeneID:
139380432
NCBI-ProteinID:
XP_070979196
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Position
22:complement(11734768..11747986)
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AA seq
737 aa
AA seq
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MMTEGTCLRRRGGPYKTEPATDLTRWRLSNTEGRQTWRYVEDQDTSDREQTMLEAHSLGL
DTSKFIPGSPSAHTAVESALKGMAFYSQLQAEDGHWAGDYGGPLFLLPGLLITCHITQIP
LPEAWKKEMVRYLRSVQLADGGWGLHIEDKSTVFGTALSYTTLRILGVGPDDPDMVRARN
NLHSKGGAVGIPSWGKFWLAILNVYSWEGMNTLLPEMWLFPTWFPAHPSTLWCHCRQVYL
PMSYCYAVRFAAKEDPLVLSLRQELYVQDYATINWPGQRNNVAACDMYTPHSTLLTVAYM
VMNVYEAHHSSSLRGRAVKELYDHIQADDRFTKCISIGPISKTINMLVRWHMDGPSSAAF
QEHVSRIPDYLWLGLDGMKMQGTNGSQLWDTAFAAQAFLEAGAQDSPRLEECLKHAHQFL
TITQIPDNPPEYQKYYRQMNKGGFPFSTRDCGWIVADCTAEGLKSVMLLQENCPFISQHV
PSERLCDSVNVLLSMRNRDGGFATYETKRGGRLLELLNPSEVFGDIMIDYTYVECTSAVM
QALRHFQHVYPEYRTEEIRSTLREGLEYCRRVQRPDGSWEGSWGVCFTYGVWFGLEAFAC
MGHTYHDGGGVCKEVQSACDFLVAHQMEDGGWGEDFESCEQRRYVQSANSQIHNTCWALL
GLMAARYPDAQVIERGIQLLVDKQLPNGDWPQENISGVFNKSCAISYTSYRNVFTVWTLG
RFFNLFPSSPLAGKVKL
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgagggaacatgccttcgtaggaggggggggccgtacaagaccgagccagcg
acagacctgacccgctggaggctgagtaacacagagggcaggcagacatggcgctatgta
gaggatcaagacacatcagacagggagcagactatgcttgaagcccattcacttggtttg
gatacgagtaaattcatccctggctctccctcagcccacactgcagtggagtcagccctg
aagggcatggcattctacagccagctccaggcagaagatggccactgggcaggagactac
ggaggacccctcttcctgctaccaggtctcctgatcacctgtcacataacccagatccct
ctccctgaggcttggaagaaggagatggtgagatacctgcgctctgtccagctggctgat
ggaggctggggcctacacattgaagacaagtccacagtgtttggcacggccctcagctac
accaccctgaggattctgggagtgggaccggatgacccggatatggttagggccaggaac
aacctgcacagcaaaggaggcgcggttggcatcccctcctggggtaaattctggttggcc
atcctcaatgtgtacagctgggaaggaatgaacacgctcctcccggagatgtggctgttc
cctacctggttccctgctcacccatccactctctggtgccactgtcgccaggtctacctc
cctatgagctactgctacgctgtcaggtttgctgccaaggaggaccccctggtgctcagc
ctcagacaggagctgtatgtccaggactatgccaccatcaactggcctggtcagcggaac
aatgtggcagcatgtgacatgtacacaccacacagcacgctactcaccgtggcttacatg
gtcatgaacgtgtatgaggcccaccacagcagcagtctacgaggaagagcggtcaaagag
ctgtacgaccacatacaggctgacgaccgtttcaccaagtgcatcagcatcggcccaatc
tccaaaacgatcaacatgctggtgcgctggcacatggacggaccctcttccgctgccttc
caggagcacgtgtccaggatcccagactacctctggctgggattggatggtatgaaaatg
cagggaaccaatggatcacagctatgggacacggctttcgcagctcaggcgttcctagag
gcaggggctcaggacagccccaggttagaagagtgtcttaaacacgcccaccagttcctc
accatcacacagataccagacaaccccccagaataccagaaatactacagacagatgaac
aagggagggttccccttcagcacgcgggactgtggctggatcgtggccgactgcacggca
gagggcctaaagtcagtgatgcttctgcaggaaaactgtcccttcatcagtcagcacgtc
ccctcagagcgcctgtgtgactccgtcaatgtgttgctaagcatgagaaacagagacggc
ggttttgccacttatgagaccaagcgaggagggagactgttggagctactcaacccctca
gaggtgtttggtgacatcatgatagactacacctatgtggagtgcacctcagcagtcatg
caggctctgagacacttccagcacgtgtaccctgaataccggacagaggagatcaggtcc
actctgagagaaggattggagtactgccggagggtgcagaggccagatgggtcatgggaa
ggatcctggggagtgtgcttcacctatggggtctggttcggcttggaggcctttgcctgc
atgggtcacacctaccatgatggcggtggtgtgtgtaaggaggtgcagagtgcctgtgac
ttcctggtggcccaccagatggaggatgggggctggggtgaggactttgagtcctgtgag
cagcgtcgctacgtgcagagtgctaactcccagatccacaacacctgctgggccctgctg
ggcctcatggctgctaggtacccagatgcacaggtgattgagagaggaatacagctgttg
gttgacaagcagctgcccaatggagactggccacaggaaaacatctcgggagtattcaat
aagagctgtgccatcagctacacttcctacaggaacgtcttcaccgtgtggacgctggga
cgcttctttaacctcttcccctccagccctctggccgggaaggtgaagctgtga
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