Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380446
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Entry
139380446 CDS
T10872
Name
(RefSeq) pituitary-specific positive transcription factor 1
KO
K09363
POU domain transcription factor, class 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139380446
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
139380446
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Epiglycanin_TR
Motif
Other DBs
NCBI-GeneID:
139380446
NCBI-ProteinID:
XP_070979220
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Position
22:complement(30299103..30301887)
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AA seq
358 aa
AA seq
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MSCQAFSADSFTTLAGDSLPLLMHHASAADCLPSSASTHTHNMVSAVPSGLSLLQSSKRS
HMHLSTSTLGNALSNGPPGLHYPVTPCHYSNQQTTYGMMAAQEMLSASISQTRILQTCSV
PHPNMVNGANTLQGSLAPCLYKFPEHGLGGGSCSLSHSFPPLPPAVLSEEPPLGGTKDLR
LRSRPPDDPPDMDSPQIRELEKFANDFKLRRIKLGYTQTNVGEALAAVHGSEFSQTTICR
FENLQLSFKNACTLKAILAKWLDEAEQAGALFNEKMGMNERKRKRRTTISLGAKEALERS
FGEKIKPSSQEIVRMAEGLHLEKEVVRVWFCNRRQREKRVKTSLHHSSYLTKDSPTYR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgccaggcgttcagcgcggactccttcaccaccctggcaggagactccctgccc
ctcctcatgcaccacgcctccgcggccgactgcctgccctcctccgcctccacacacaca
cacaacatggtgtccgcagtcccgtcaggtctgtctctcctccagtcctcaaagcgttcc
cacatgcacctctccacttccacccttggcaacgccctcagcaacggtcctcccggcctg
cactacccagtcacaccctgtcactatagcaaccaacagaccacttacggcatgatggca
gctcaggagatgctgtctgccagtatatctcagaccagaatcctccagacctgcagcgtc
ccgcaccccaacatggtcaacggagcaaacacactgcaaggttcattggccccttgtctg
tataagtttccagagcatggtctgggtggggggtcgtgctctctgagccacagtttcccc
ccactgccccctgccgtgttgtctgaggagccacccctggggggcactaaggacctccgc
cttaggagccggccaccagatgacccccccgacatggactcacctcagatacgagagctg
gagaagtttgccaacgacttcaaactccgcaggatcaaactggggtacacccaaactaat
gttggagaggctctggctgcggtgcatggctcagagttcagccagacaaccatctgtcgc
tttgagaacctgcagctgagcttcaagaacgcctgcacgttaaaggccatcctggccaag
tggctggacgaagcagagcaggccggggctctgtttaatgagaaaatgggcatgaatgag
cgtaagaggaaacgaagaaccactatcagtctgggggctaaggaggcattggagcgtagt
ttcggggagaagatcaagccctcatctcaggagatcgtccgtatggccgaggggctacac
ctggagaaggaggtggtccgggtctggttctgtaaccgtcggcaacgggagaaacgggtc
aagaccagccttcaccacagctcctacctgaccaaggacagtcctacctatagataa
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