Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380478
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Entry
139380478 CDS
T10872
Name
(RefSeq) homeobox protein Hox-D10a-like
KO
K09295
homrobox protein Hox-D10
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139380478
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
139380478
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
139380478
NCBI-ProteinID:
XP_070979275
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All DBs
Position
22:complement(45152476..45154104)
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AA seq
337 aa
AA seq
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MSFPNSSPVTNTFVVDSLIGACRTDRFYSSSNMYMPSGAEMGIYGMQTCGLLPSLSKRGD
VNHQNMGMNFHPYIPQIDNWTDPNRPCGIEQPSNQMPNCTFSQNIKEERNFCMYSDKRAK
VNSSDVPVYANIIPESCSVDCPEIPVPGYFRLNQTYSTGKDQDYGQEKTSPNITFVQLNR
VTPNPQLSSFFVELEKKTAEIPHNLETSKTPIPAEIPNPTSTAQREENCSTESSVSSPEL
THRESKDSKTDPPTSNWMTATSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKGV
NLTDRQVKIWFQNRRMKLKKMNSENRIRGLTSNLTFS
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttcccaacagctctcctgttactaatacttttgtagttgattcgttgattggc
gcttgcaggactgaccgtttttactccagcagcaacatgtacatgccgtccggtgcagaa
atgggaatttacggaatgcaaacctgtggactcttgccgtctctcagtaaacgaggagac
gtcaaccaccaaaatatgggcatgaatttccacccttacatacctcaaattgataactgg
acagatcccaatagaccttgcggaatagagcaaccatccaaccaaatgcccaattgcaca
ttttcacaaaacattaaggaggagaggaatttctgcatgtattccgacaagagagcaaag
gtcaactcgtccgatgtccctgtatatgctaatataatccccgaatcgtgttcagttgac
tgccccgagatccctgtcccagggtatttcagattaaaccaaacctactcgactgggaaa
gaccaggactatggccaggagaagacaagtccaaacatcacattcgtgcagctcaacaga
gtcactccaaacccgcaattgtcttccttttttgtcgaactggaaaagaaaacggccgag
ataccgcataacctggagaccagcaagacacccatccccgcggaaatcccgaatcctaca
tccaccgcgcaacgggaggagaactgctccactgaatcttcagtctccagcccagagttg
acacacagagaatctaaagacagcaaaactgaccctccaacgagcaattggatgactgca
acaagcggcaggaagaaaagatgcccctacacaaagcaccagacgcttgaattggaaaag
gagtttttattcaacatgtacctgacccgagagcgccgtctagagatcagtaaaggcgtc
aacctcaccgacaggcaagtcaagatctggttccaaaaccgcaggatgaagcttaagaaa
atgaacagtgaaaaccgaattcggggacttacttcaaatctcaccttttcgtga
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