Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380508
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Entry
139380508 CDS
T10872
Name
(RefSeq) centriole and centriolar satellite protein ofd1
KO
K16480
oral-facial-digital syndrome 1 protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139380508
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139380508
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
139380508
Pericentriolar materials (PCM)
Centriolar satellite
139380508
Centrosome duplication proteins
Centriole replication proteins
139380508
Cilium and associated proteins [BR:
ocla03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
139380508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LisH_2
DUF4887
LisH
Motif
Other DBs
NCBI-GeneID:
139380508
NCBI-ProteinID:
XP_070979319
LinkDB
All DBs
Position
22:17879344..17891270
Genome browser
AA seq
1084 aa
AA seq
DB search
MSVAKEEALSPDELRKRLYQTFKNRGVLDTLKTQLRNQLIHELKHPILSGETVPRPVPMK
SDSVLVTASNSLVADHLRNSGYEYTLSVFYPECGMGKDKIFTSRDILQLMKISPRSPLYK
YLASSTQKENKGFLMSLLIELTDRHLHGERRDADTQTTSTPAYRESLVDKMKMIDEEYEA
LRYKGDKWVSYESKLAAYRKEVEAQVQAEMNAKLQHYKDVEMSKVKMEEKDKSRKEILQL
RQDMERTYEMKSGALINREKNAIDRLQKQQEIEEKDVYMQRQAVLKEIETVRNREAELRL
RMEAFEKTCKIQEDKTKTMEELLRRRELAVKTTEDTYDQKLKNELSRYQLELNEEYTKRT
EKLTENEKRNKVETIRMQKESAAIDAKLEEHSRACAELRRLQMELDTSQSQYSLLTQQNE
LLRERLETMNDYPTLRRERVEQQAQLRLLMKQLEEAQEENQRLRADLGRPSVEQLALQTE
LRRLESARRLSEEEFDSHRQVLQAQLHNEVERCAQLKAQLIDCEERTQWMTTHAEDIKMQ
LRQTQLALENEVLRNPKPSLVDRSVLELNPDKLVPPDIYVDRGVLRAWVAGYDDVCEAGV
MPSQGRRSRWGRSSSPDSDAELVAGAKARIRELEKEAETLEEAYRNYQQRAVHATVSHML
PPRCLSPQRAPVSPRPHSTQRQHISHQRPHSPQRQQVPPQPCPHSPQHPQVSHRPLSPQQ
QLPPQRTRAPASPQPRVTFAEDPSQDQYPGPGSGRDFQSLDFSEARFSGDRHPLEGTSSP
HRRLSSTPLSLSRSQLHTEPVEEAEVSSVAFPVLSPERQLSPLPLPHGEVTCSGDFTSDL
SPPRSPQLRSTARGQCSPPQLQQIIFSSSESESSPQPEKITIEDLTEPLPEPSHIPELLL
DTAGNEEEALDGPLTVPPSRAPWDLTEAQLQGEVQQTLDESARQEEEEELRWERERRERE
EKRQREKEEAQEKELRELERLEKERLLEEVQQYGEEVGGDEEKEERRGQEELKEAEEPEE
KAPSSDKDPLQKYLKMIMEQRRSPHVQIPAGREEPEHRSPEAKSLSDEKDDSVAFSHEDA
DEFW
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgccaaggaggaggctttatccccagatgagctgaggaagaggctttaccaa
acctttaagaatcgaggagtgcttgacacacttaaaacgcagcttcgtaatcagttgatc
catgaattgaagcaccccatcttgagtggagaaactgttcccaggccagtccctatgaag
tcagactctgtcctggtcaccgcttctaacagtctggtggcagatcatttgaggaactct
gggtatgagtacaccctgtctgtgttctaccctgaatgtggcatgggcaaagataagatt
ttcacttcaagggacattcttcaacttatgaaaatcagcccgcggtcaccactttacaaa
tatctggcatcaagtacacagaaagagaataagggtttcctgatgagtctcttgatagaa
ttaacagaccgtcatctgcatggagaacggcgtgatgctgatactcagaccaccagtacg
ccagcttatagagaatctcttgttgacaagatgaaaatgatcgatgaggagtatgaagct
ctccgctacaaaggggacaagtgggtgtcctatgaatctaagcttgctgcatatcgaaaa
gaagttgaagcacaggttcaagccgaaatgaatgcaaagctgcaacattataaagatgtg
gaaatgtccaaagtgaagatggaggaaaaagacaaatctcgcaaagagattttgcagctg
aggcaggacatggagaggacttatgagatgaagtcgggggcattgatcaatagggagaag
aatgccatcgatcgattacagaaacaacaagagattgaggaaaaagacgtctatatgcaa
agacaagctgtgttgaaagaaatagaaaccgtgcggaatagagaagctgagctgaggtta
aggatggaggcttttgaaaagacttgcaaaatacaggaagacaagaccaagaccatggag
gagctgctgagaagaagagagcttgcagtgaagacgacggaggacacctatgaccaaaag
ctgaagaatgagctttcaagatatcagcttgagttaaatgaagagtacaccaaaaggact
gaaaaactcacagagaatgaaaaaagaaacaaagtggagactattcgtatgcagaaggag
tcggctgcaatcgatgccaagctagaggaacacagcagagcttgtgctgagttgagacga
ttgcagatggagctggacacgtcccagtctcagtactctctgctaacacagcagaatgag
ctgctgagagagaggctggagaccatgaatgactaccccaccctgaggcgagagagggtg
gagcagcaggcccagctcaggctgctgatgaaacagctggaggaagctcaggaggagaac
cagcgcctacgggcagatctgggcaggccgtcggtggagcagctggcgctgcagacggag
ctgaggaggctggagagtgccaggaggctgtcagaggaggagtttgatagccacagacag
gtgctgcaggcccagctccacaatgaggtggagcgctgtgcccagttgaaggcccagctc
atagattgtgaggagaggactcagtggatgaccacccatgcagaggacatcaagatgcag
ctccgacaaacacaactagctctagagaacgaggtcctgcgtaaccctaagccctcccta
gtggaccgctcagtgctggagctcaatcctgataaactagtgcctcctgatatctatgtg
gacagaggtgtcctgagagcctgggtggctggttatgatgacgtgtgtgaagcaggtgtg
atgccctctcaagggcgcaggtctcgctgggggcggagcagctccccagactctgacgct
gagctggtggccggggccaaggccaggatcagagagctggagaaggaggcggagacactg
gaggaagcttacaggaactaccagcagagggcggtgcacgccaccgtgtctcacatgctg
cccccgcgatgcctctcaccccaacgagcaccggtatcaccccgccctcactcaactcag
aggcaacatatctctcaccaacgccctcactcgccccaaagacaacaagtccccccccaa
ccttgcccccactcaccccagcatccacaagtctcccacagacctctctcgcctcaacaa
caactccctccccagcgcaccagagcccccgcctctccccaacccagagtgaccttcgct
gaagacccgtcccaggatcagtaccctggtccagggagcggaagggacttccagtctctg
gacttcagtgaggcccggttttcaggagacagacaccccctggaaggcacctcctctccc
cacaggcgcctgtcttccacacccctctccctctccaggagccagcttcacacagagcct
gtggaagaggctgaggtatcgtctgtggcgtttcctgtgctgtctcctgagaggcagctc
tcccccctccccctgccccacggagaggtaacgtgctcaggggactttacctcagatctc
tccccacctcgcagccctcagctcaggagcactgcacgaggccaatgcagtccaccacag
ttacagcaaatcatcttctccagttccgagtcagagtcttcccctcagcctgagaagata
accattgaagatctcacagagcctttgccagagcccagccacattccagagctgctcctg
gacacggcgggaaatgaggaggaggcccttgacgggcccctgactgtccccccgtctcgg
gccccttgggacctcacagaggctcagctgcagggggaagttcaacaaacgctggatgaa
tctgccagacaggaggaagaagaggagctgaggtgggagcgagagaggagagagagagaa
gaaaaacgacagcgggaaaaggaggaagcccaggagaaggagctgagagaactggagaga
ttggagaaagaaaggctattggaagaagtgcagcagtatggagaggaggtggggggagat
gaagagaaggaggagagaagagggcaggaagaactgaaggaggcagaagagcctgaggag
aaagccccgtcctcggacaaagatccactccagaagtacctgaagatgatcatggagcaa
agacggagtccgcatgtacagatccctgctgggagagaggagccagaacacaggagcccc
gaggccaagagtttgtctgatgagaaagatgatagcgttgctttctcacatgaagatgca
gatgagttctggtga
DBGET
integrated database retrieval system
