Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380561
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Entry
139380561 CDS
T10872
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 9X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
139380561
Peptidases and inhibitors [BR:
ocla01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
139380561
Ubiquitin system [BR:
ocla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
139380561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139380561
NCBI-ProteinID:
XP_070979429
LinkDB
All DBs
Position
22:complement(20733297..20824795)
Genome browser
AA seq
2636 aa
AA seq
DB search
MTATTRGSPVGGNDNQAGQAPDAQSQSQPPLPQNQTASPNSTNENSPVSPPDEQGQGDGP
TQLEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIELSKKGLDVKCEACQ
RFFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMA
TNPHCKFHIYNGTRPSETVPAGVQLADDELFARPPDPRSPKGWLVDLINKFGSLNGFQTL
HDRFIGGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEELKKE
AKNEAKNDALSMIIKSLKNLASRVPGQEETVKSLEIFRLKMILRLLQISSFNGKMNALNE
VNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKIL
RFVIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWT
NASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILD
YSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKIPINIQT
NLAGQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQFSKAEQAEFDPQTVR
AGSRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSK
LMGDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMM
DDLELIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRL
KASYDTLRVLDGDKDSINSARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRG
KHITLTVRFPNQGRQVDDLDIWSHTNDTIGSVRRGILTRIKANATHTKIELFIGGDVVDP
ADDRKLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHFSDGPNPEVE
SCLPGVIMSLHLRYISFLWQVADLGCGINMPLLRDGARVLMKLMPPDNSTVEILRAMCLD
HAKLGENSLSPTLDSRFFGPSPSQVLYLIEVVYALLMPASATLGEDASDFQYNFLKSGGL
PLVLSMLTRNNFLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPNAEGTIP
VSPINQATHDQALVLQSALQNIPNPASECMLRNVAIRLAQQISDENFFQASKYIPDICVI
RAVQKIVWASGCGTVQLVFSSNEEISKIYEKTNAAKEPDGEDEQVCCEALEIMTLCFSLL
PTALDTLSKEKAWQTFIIDLLMHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFT
VLGSTAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTGE
TGVEETILEGHIGITKELLAFQTSEKKYYIGCEKGGANLIKELIDDFIFPASNVYLQYMK
SGEFPTEQAIPVCSSPASINAGFELLVALAVGCVRNLKQMVDTLTDMYYLGCEALTEWEY
LPPVGPRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGTDVDDDMSGDEK
QENESNVDPRDEVFNYHHQFDDKPSLSKSEDRKEYNIGVLRHLQVIFGHLASSRLQYYIP
RGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKIC
QGCPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRL
LIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPEN
QVIQQNEPSEPEPPGSSKYRLVGVLVHSGQASGGHYYSYITQRNVGGADGERNRWYKFDD
GDVTECKMDDEEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSLDKD
SELVKYIQELTISSSSNNKPPHQVKMPGVIECSVRKQNVQFMHNRMQYSLEYFQFVKKLL
TCNSVYLNPPPGQDHLLPEAEEMAMISVQLAAKFLFSTGFHTKKVVRGPASDWYDALCVL
LRHSKNVRYWFAHNFLFAYTNRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPT
ASPVGASTQPQACDNLSLSDHLLRTVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKT
QLLKLSVPATFMLVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVAARMQSSINGNPP
LPNPYGDANQTTPVMPVQQLVGEILFVRTSYVKKIIEDCSNSEETVKLLRFSCWENPQFS
STVLSELLWQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQ
RSKNHYQKRAYQCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGN
PQYTYNNWSPPVQSNETSNGYFLERSHSARMTLAKACELCPEECHLTKHGEAVSEEDAAM
RKSSSPQQLLPGEGTGQQHTEPDDQEAPEDQDTSPPDDISLYPHSSPGTTTQFQQQNNHP
HGQPYTGPAAQHMNNPQRPGPVPSSAPGTGPQAQDNWESTEEVPSTTSLAPAPPKE
NT seq
7911 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacgcgtggctctcctgttgggggaaacgacaaccaggcaggccaggcg
cccgacgctcagagccagagccagcccccgctgccacagaaccagacggcgtcccctaac
tccaccaatgagaactctccagtgagccccccggatgagcagggtcagggggatggcccc
acccagctggaggaggaggagcctgccttccctcacacagacctggccaagctggatgac
atgatcaacagaccccgctgggttgttccagttcttccaaagggagagttagaggttctt
ctagaagctgctatagagcttagtaaaaaaggacttgatgtgaagtgtgaggcgtgccag
aggtttttccgagatggcctgaccatctccttcaccaagatccttacagacgaggccgtc
agcgggtggaagtttgagatccataggtgtatcatcaacaacacacaccggctggtggag
ctgtgtgtggccaagctttctcaggactggttccccttgctggagctgctggccatggcc
accaacccccactgcaagttccacatctacaacggcacacggccctctgagacggtgcct
gccggggtgcagctggccgatgacgagctcttcgctcgcccccctgaccctcgctccccc
aagggctggttggtggatttaataaacaaatttggctcgttaaatgggtttcaaacactg
cacgatcgcttcataggtggccaagcactgaacgtccagatcatcgccgcacttatcaag
ccttttgggcagtgttacgagttcctcacattgcacacggtgaagaagtacttcctgcct
gtcatcgagatggttcctcagtttctggagaacctgacagatgaggagctgaagaaggag
gccaagaacgaagccaaaaatgacgccctgtccatgatcatcaagtccctgaagaacctg
gcctccagggtgcctgggcaggaggagaccgtgaagagtttagagatttttaggttaaaa
atgattcttaggttattgcaaatttcctcttttaatggcaaaatgaatgcactaaatgaa
gtaaacaaggtaatctcaagtgtgtcctactacacacatcgacatggcaaccctgaggag
gaggagtggcttactgcagagcgcatggcggagtggatccagcagaaccacatcctgtcc
atcgttctgagggacagtctgcaccagcctcagtacgtagaaaaactagagaagatactt
cgcttcgtcatcaaagagaaagctcttaccatgcaggacctggacaacatctgggctgca
caggctggtaaacatgaggccatcgtgaagaacgtccacgacctcctggccaagctggcc
tgggacttctcccctgagcagctcgaccacctttttgactgcttcaaggcgagttggacg
aacgctagtaagaagcagcgtgagaagctgctggagctgatccgtcgtctggcggaggat
gacaaggatggggtgatggcccacaaggtgctgaacctgttgtggaacctggctcacagc
gatgacgtgcctgtagacatcatggaccaggccctcagtgctcacatcaagatactggac
tacagttgctctcaggatcgagacacgcagaagatccagtggatcgatcgcttcatagaa
gagttgcgcaccaatgacaaatgggtgattcctgcactaaagcagatccgagagatctgt
agcctgttcggagaggctcctcagaatctcagaaagaaaattcctattaacatacaaacg
aacttagcgggtcagactcagaggagtcctcatgtgttctatcgtcatgacctgatcaac
cagctccaacacaaccatgccctggtcacactggtggctgagaacctctctgcctacatg
gagaccatgaggcagttctctaaagccgagcaggcagagtttgacccccagacggtgagg
gcagggagccgctacagccacgtacaggaagtccaggagagactcaacttcctgaggttc
ctgctgaaggatggccagttgtggctctgtgctcctcaggccaaacagatctggaagtgc
ctggctgaaaacgctgtcttcctatgtgatagagaggcctgcttcaaatggtactctaag
ctgatgggagatgagccagacctggacccagacattaacaaggacttctttgagaacaac
gtcctccagctggacccgtctctgctcacagagaacggcatgaagtgcttcgagaggttc
ttcaaggctgtcaactgccgggagggaaagctggtggccaaacgcagggcctacatgatg
gacgacctggagctcataggactggactacctctggagggtcgtaattcaagggagcgat
gacatcgccagtcgagccatagacctgctgaaagagatctacaccaacctcggaccaaaa
ctacaagtcaatcaggtagagatccacgaggatttcatccagtcgtgcttcgaccgtctg
aaggcgtcgtacgatacgctgcgtgtcctggacggggacaaggacagcatcaactcggcc
cggcaggaagccatccgcatggtccgcgtgctcactgtgctcaaggagtacatcaacgag
tgtgacagcgactaccatgaggagaggaccatactgcccatgtccagggcgttccggggg
aagcacatcacgttgaccgtgcgttttcctaaccagggccgtcaggtagatgacctggac
atctggtctcacaccaacgacaccatcggctcggtgcgccgtggcatcctcacacgcatc
aaggccaacgccacgcacaccaagatagagctcttcattggcggggatgtcgtcgaccca
gccgatgacagaaagctgattggccagctcaacctcaaagacaaaacgttgatcacagcc
aagctgacccaggtgagtgccaacatgccgtccagcccagacagctcctcggactcttcc
accggctcacctggtaaccacggcaaccacttcagcgacgggcccaacccagaggtggag
agctgtctccctggagtgatcatgtctctccacctgcgctacatatctttcctgtggcag
gtagcggacctgggctgtggcattaacatgcctctgttacgagatggagccagggtactc
atgaagctaatgcctccagataacagtaccgtggagatcctgcgtgccatgtgtctggac
catgccaagctgggagagaacagcctcagccccacactggactcgcgcttctttggcccc
tcgccatcacaagtcctctacctcatagaagtggtgtatgccctactcatgccagccagc
gccacattgggggaggatgccagcgacttccagtacaacttcctgaagagtggcgggctg
cctcttgtactgagcatgctcacacggaacaacttcctgccttcggccgacatggagaca
cggcgaggggcgtacctcaacgctctgaagatcgccaagctgctgctcaccgccgtgggg
ttcggacacgttaaagctgtggccgaggcctgccagcccaatgctgaggggaccatacca
gtctcaccgatcaaccaggccactcatgaccaagccctggtcctccagagtgccctgcaa
aacatccccaaccctgcctcagagtgtatgctccgcaacgtagctatacgcctggctcag
cagatctctgacgagaacttcttccaggcgtccaagtacatcccagacatctgtgtgatc
cgggcggtgcagaagatagtgtgggcgtcgggctgtggcaccgtacagctagtctttagc
tccaacgaagagatcagcaagatctacgagaagacgaatgcggctaaggagccggacggg
gaggatgagcaggtgtgttgtgaggccctggagatcatgaccctgtgtttctccctgctg
cccaccgctctggacacactcagcaaggagaaggcctggcagaccttcatcatagacctg
ctaatgcactgccacagcaagtcagttcgtcagatggcccaggagcagttcttcctcatg
gccaccaggtgttgcatgggccatcgaccccttctcttcttcatcaccctcctcttcact
gtgctggggagcaccgctaaggagcgggccaagcatgctggggactacttcaccctgctc
aggcacctcctgaactatgcctacaacagcaacatcaacctgcccaacgcagaggtgctg
ctcaacaatgaaatcgactggctcaagaggatcagggatgaggtaaagaggacaggggag
acgggcgtagaggaaaccatcctggagggccacatcgggatcaccaaggagctgctggcc
ttccaaacatcagagaagaagtactacatcggctgtgagaagggaggggccaacctcatc
aaggagttgatagatgacttcattttcccagcatcgaacgtgtacctgcagtacatgaag
agtggggagttccccacggagcaagccatccctgtctgtagcagccccgcctctatcaac
gcaggcttcgagctgctggtggcgctggcggtgggctgtgtccggaatctaaagcagatg
gtcgacacgctcactgatatgtactacctaggttgtgaggctttgacagagtgggagtat
ctccccccggtgggaccgaggccaactaaaggctttgtgggactgaagaacgccggagcc
acctgctacatgaactctgtcatccagcagctctacatgatcccgcccatacgcaacggc
attctggccatcgagggcaccggcaccgatgtggacgatgacatgtccggtgatgagaag
caggagaacgagagtaatgtggacccgcgagatgaggtgttcaactaccaccaccagttt
gacgacaagccatcgctcagtaaatcggaggacaggaaggagtacaacatcggcgtgctg
cgccacctgcaggtcatctttggccacctggcctcctccagactgcagtactacataccg
agaggcttctggaaacagttcaggttatggggcgagcctgtgaacctgcgagagcagcac
gatgccctggagttcttcaactctctagtggacagtctggacgaggctctgaaagccctg
ggtcacccagccatgctcagtaaggtgctgggtggatcctttgctgaccagaagatctgc
caggggtgcccacataggtatgagtgtgaggagtcgttcaccactctgaatgtagacatc
aggaaccaccagaacctgttggactcaatggagcagtacgtcaaaggagacctgctggag
ggtgctaacgcataccactgtgagaagtgcaacaagaaggtggacacagtgaagcggctg
ctgatcaagaagcttcccccagtgctggccatccagctgaagaggtttgactatgactgg
gagagggagtgtgccatcaagttcaacgactactttgagttccccagggagctggacatg
gagccctacactgtggccggggtggccaagctggagggggacgacgtcaacccagagaac
caggtgatccagcagaacgagccctctgaaccagagcccccaggcagctccaagtaccgc
ctggttggggtgctggtccactcaggccaggccagcggcggacactactactcatacatc
acacagaggaacgtgggcggggccgacggcgagcggaaccgctggtacaagtttgacgac
ggcgacgtgacggagtgcaagatggacgacgaggaggagatgaagaaccagtgcttcgga
ggggagtacatgggcgaggtgtttgaccacatgatgaagaggatgtcgtaccggcgtcag
aagcgctggtggaacgcatacatcctcttctacgagcggatggactcactggacaaggac
agcgagctggtcaagtacattcaggagctgaccatctcgtcctcgtccaacaacaagcca
ccgcaccaggtcaagatgcccggtgtaatcgagtgcagtgtgcgcaagcagaatgtgcag
ttcatgcacaatcgtatgcagtacagcctggagtatttccagtttgttaagaaacttctg
acctgtaacagtgtctatttaaaccctccgccaggacaagaccatctactgcctgaggcg
gaggagatggctatgattagtgttcagctggctgctaagttcctattcagcactgggttc
cacaccaagaaagtagtgagggggcccgccagtgactggtatgatgcactttgcgttttg
ctgagacatagtaagaatgtacgctactggtttgcacacaacttcctgtttgcctacacc
aaccgcttctccgagtacctgctggagtgccccagtgccgaggtccggggcgcgtttgcc
aaactcatcgtcttcattgcacacttctccctgcaagacggaccctgcccctcccccact
gcctctcctgtcggagcctccacccaaccacaggcatgtgataacctgagtctcagtgac
cacctgttgaggactgtattgaacctgctcaggagagaggtgtcagagcacggccgacac
ctgcagcagtacttcaacctcttcgttatgtatgccaacctggggctggcagagaagacc
cagttgttgaagctgagtgtcccagctaccttcatgctggtggctctagacgaggggcct
ggccctcccataaagtaccagtatgctgaactaggcaaactgtacaccgtagtctcccaa
ctggtgcgctgctgtgacgtggccgcgcgcatgcagtcctccatcaatggtaacccccct
ctccctaacccgtacggtgatgccaaccagaccaccccggtgatgcccgtgcagcagctg
gtgggagagatcctgttcgtaaggaccagctatgtgaaaaagatcattgaggactgcagc
aactcagaggagacggtcaagctgctgcgcttcagttgctgggaaaacccccagttctcc
tccactgtactatcagagctgctctggcaggtggcgtactcgtacacctacgagctgagg
ccttacctggacctgctgctgcagatcctgctcattgaggactcctggcagactcacagg
atccacaacgtgctgaagggtataccagatgacagggatggcctatttgacaccatccag
cgctccaagaaccactaccagaaacgggcctaccagtgtatcaagtgcatggtagccctc
ttcagcaactgctctgtggcctaccagatactacagagtaacggggacctgaagcgtaag
tggacgtgggcagtggagtggctcggtgacgagctggaaaggaggccctacacagggaac
cctcagtacacctacaacaactggtctcccccagtccagagcaacgagacctccaacgga
tacttcctggagcgctcgcactccgcacgcatgaccctggccaaggcctgtgaactctgc
cctgaggagtgtcacttaacgaagcacggtgaggcggtgtctgaagaagatgctgccatg
cggaaatcgtcctcgccacagcagcttttgccaggggaagggacaggacagcagcacact
gagcccgatgaccaggaagccccggaagatcaggacacctcccctccagatgacatctcc
ctctaccctcattcgtctccggggactacgacacagtttcagcagcagaacaaccacccc
cacgggcagccgtacacaggcccagctgcccagcacatgaacaacccccagcgccccggc
cctgtcccttcctctgcgcccggcacaggcccacaagcacaagacaactgggagagcact
gaggaggtcccctccaccacctccttggcccctgctccgcctaaggagtaa
DBGET
integrated database retrieval system
