KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380600
Entry
139380600         CDS       T10872                                 
Name
(RefSeq) DNA repair protein REV1 isoform X1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    139380600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ocla03400]
    139380600
DNA repair and recombination proteins [BR:ocla03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    139380600
SSDB
Motif
Pfam: IMS IMS_HHH_1 REV1_C IMS_C UBM BRCT_2 POLH-Rev1_HhH BRCT LIG3_BRCT IMS_HHH Cdd1 PTCB-BRCT HHH_5 DUF7674 DUF1805
Other DBs
NCBI-GeneID: 139380600
NCBI-ProteinID: XP_070979527
LinkDB
Position
22:complement(22085676..22107957)
AA seq 1448 aa
MSRDGRRKRDRDDNGWASMGGYMAAKVSKLDEQFKMDAPREKQKDGACSSIFTGVAIYVN
GYTDPSADELRRLMMLHGGLFHMYYSRSKTTHIITTNLPNSKIQELRDQKVVRPEWITDS
IKAGHLLSYLQYQLYAKQKGLSFPSVCVRQGQEAAGLIHGQTQPSHSLPVPSLNNLIPVL
NNPSPSLGKPLSSHHTPISSHSHLHIDNLLPQPNQCNPLSGDLNPQPSHSLPLASHLNPQ
SRHFSPGHCFLSPYSSNHLYSDPGHIPHHPPSQGQAKPGCIQPLAPADTHLQTPGPIPAH
PSHEHSKPGHAQPQSSLSFSNHLQHSYRDLDFRLNGSLLTYDKMRTAQINWVQEGGGEDP
CSVRPTRGATDPPLTNGHAHPVNGALKPLDLSPNPTLPTDTPLNPDRKSTGGSVSLHPAS
PLSNSPLKSDPPKLLHSPPRNPTPPPVSHHRHHEQLANEQRPKPPPPTYQEATAALASRP
LVLSPPKPRQSDSPPEKPLPLDNPNRSTSPVRLNGSHHNAFTPNPAPLETNNLSAIPSNP
APPDSDHQSVLAKTGGIISEFYSHSRLHHISTWRSEFSEYVNTLQSKRRATGGATFPGRD
RLKRQRREGSSAAPGPQSCILHVDMDCFFVSVGIRHRPDLKGKPVAVTSNRGPGRVAQRP
GVDRQLELQYYQRKYSHAGVSERKDGDLEEMTSAEDHVSHGNGVDPDTTCLSMAEIASCS
YEARQAGVRNGMFFGQAKQLCPSLQSVPYDFQAYKEVALAMYETLASYTHNIEALSCDEA
LVDCSALLAELGATPEELASAIRTDVRERTGCTASVGMGSNILLARMATRKAKPDGQYLL
RSEEVDDFIRDHRVTSLPGVGRSMGAKLASLGVRSCGDLQQVSLQQLQKEFGPRTGQTLF
RFCRGLDDRPVRSEKERKSVSAEMNYNIRFTQVDEAESFLTNLSMEVQKRLQGAGLRGRR
LTLKVMVRKVGAPVEPSKYGGHGICDNLARSVTLAHSTDSGQLIASEVIKLFHSMRLEVQ
DLRGVGLQVQLLDGAHSAPYDPSGPKTRSIRDMLLAQRPPAQHNHTDLLADAPVADSTTN
QGKSSSARVPPPFSTLRPPSPADPIPGTSKEEPLPSTRTPNHVRTRLNLSIEVPSPSQVD
RSVLDALPAELREQVERSWTHREKERSHNGSHHRPSSPHPSSLLSSPSSPPTPAALPVGT
LVLQIPNQPGQPGSTGIILELPDFSQVDPEVFAALPRELQEELRSAYSRRETAQAQGIIM
AEQRNPLLQLKQVGVGRVKRRYKKKNTNSSPIKKGPSPLKRPHPPGNSPAKALQHPLRPR
DLSNGLKLENGPSTSSLKQDVPETLSKFTPRPEPTLAGACDFTDIRTLLREWVTTISEPM
EEDILQVVKYCTDLIEDKDLEKLDLVIKYMKRLMQQSVESVWSMAFDFILDNVQVVVQQT
YGSTLKIT
NT seq 4347 nt   +upstreamnt  +downstreamnt
atgagtcgagatgggcggaggaagagggacagggatgacaacggttgggcctccatgggt
ggctacatggctgctaaggtgtccaagctggatgagcagtttaagatggacgcccccaga
gagaaacagaaagatggagcctgctctagcatcttcactggggtggccatatatgtcaac
gggtacacagaccccagtgcggacgagctgcgcaggctgatgatgctgcatgggggtctg
tttcacatgtactactcccgctccaagacaacccacataatcaccaccaatctgcccaac
agcaagatacaggagctgagggaccagaaggtggtccggccggagtggatcactgacagt
atcaaggctggccatctcctgtcctacctgcagtaccagctctatgccaagcagaaaggc
ctgagcttccccagtgtgtgtgttcgccagggccaggaggctgcaggactcatccacggg
caaacccaacccagccacagcctccctgtacccagcctcaataacctcatacctgtcctc
aacaacccatcccccagccttgggaagcccctatccagccaccacactcctatatccagc
cacagtcatctacacatagacaatctcctcccccagcccaaccagtgtaacccgctatct
ggtgacctcaacccccagcccagccactcgctccccctcgccagtcacctcaaccctcag
tccagacactttagcccaggacactgctttctcagcccctactcctccaatcacctctac
tctgacccaggacacatcccccaccacccacccagccaagggcaggccaagccaggctgc
atccagcctcttgctccagccgacacccacttacagacccccggtcccatcccagctcac
cccagccatgagcactctaaacctgggcacgcacaacctcagtccagcctttccttctcc
aaccacctccagcacagctaccgggatctggacttcagactaaatggatcattactgacc
tatgacaaaatgaggaccgcccaaataaactgggtgcaagaggggggcggtgaggacccc
tgttctgtcagacccaccagaggggcaacggacccccctctgaccaatggtcacgcccac
cctgtgaatggtgccttaaagcctctggatctctcccccaaccccacactacccacagac
acacccctgaaccctgacaggaagtccacgggggggtctgtgtccctgcatcctgccagc
cccctatccaactcccctttgaaatctgacccccccaaacttctccacagcccccccagg
aacccaactcctccccctgtgtctcaccacagacaccacgaacaactggccaatgaacag
cgacccaaacctccgccgcccacctatcaggaggcgacggctgccttggcgtcccgcccc
ctcgttctctcaccgccgaagccccgtcaatcagattcccctcctgagaaacccctcccc
cttgataacccaaaccgctccacttcccctgtccgtctgaatggcagtcaccacaatgcc
tttacacctaaccctgcccctcttgaaaccaacaacttatcagctattccctcaaatccc
gcccctccagacagcgaccaccaatcagtactggcgaagaccggggggatcatctcagag
ttctattcccactctcgtctacatcacatctccacgtggaggagtgagttctctgagtat
gtcaacacgctgcagagcaagaggagggccacggggggcgccacattccccggtagagac
aggctcaaacgccagaggagagagggttcgtcagctgctcctggccctcagtcctgtatc
ctgcatgtggacatggactgtttctttgtctctgtggggatcagacacaggcccgacctt
aaagggaagccagtagctgtgaccagtaaccgtggtccaggcagagtggcccagaggcct
ggtgttgaccgccagctggagctgcagtactatcagaggaaatactcccatgcaggtgtg
tcggagaggaaggatggggacctggaggaaatgacctcggccgaggatcacgtctcccac
ggcaatggtgtggacccggacacaacttgcctctctatggctgagattgcctcctgtagc
tacgaggccaggcaggcaggagtgaggaatgggatgttttttggccaggccaaacagctg
tgtccttccctgcagtctgtcccttatgacttccaggcttacaaggaggtggcactggct
atgtacgagaccctcgccagttatactcacaacattgaggctctgagttgtgacgaggcg
ttggtggattgctctgccctgctggctgagttgggtgctacacctgaagagctggccagc
gccatccggacagatgtcagggagaggactgggtgcactgcctcagtgggcatggggtcc
aacatcctgttggcgaggatggcgacccggaaggccaagccagacggacagtacctcctg
aggtcagaggaagtggacgacttcattagggaccacagggtcactagcctgccaggtgtg
ggccgttctatgggcgcaaagctggcgtctctgggtgtgaggtcgtgtggggacctgcaa
caggtgtctctacagcaactgcagaaggagtttggccctcgcaccgggcagaccctcttc
aggttctgccgaggtctcgacgaccggcccgtacgcagcgagaaggaaaggaagtctgtc
tcggccgagatgaactacaacatccgcttcacacaggtggacgaggcggagtcgttcctg
accaacctgtccatggaggtacagaagcgtcttcagggggcggggctcaggggtcgcaga
ctgaccctaaaggtcatggtgcgtaaggtgggggccccggtggagccatccaaatatggt
ggtcacggcatctgtgacaatctggccaggtcagtgaccctggcccattcgacagacagt
ggtcagctgatagccagtgaggtcatcaagctgttccactcaatgaggctggaggtgcag
gacctgaggggggtgggccttcaggtgcagctccttgatggggctcactcagccccctat
gacccctccggccctaaaacgcgctccatcagagacatgcttctggcccagcggcccccc
gcccaacacaaccacacagatttgctagctgatgctcctgttgctgactcaaccaccaat
caggggaagagttcctctgccagagtcccacctcccttctccactctccgccctccttcg
cctgctgatccaatcccagggacaagtaaagaagagccgctgccctctacacgcacacct
aaccatgttcggacacgcctcaacctcagcatcgaggtcccctctccttcacaggtggac
aggtcagtgttggatgccttgcctgcagaattgagagaacaggtggagcgctcctggacc
cacagagagaaagagagatcccacaacgggtcacaccaccgcccctctagccctcacccc
tcatcccttctttcttccccctcctctcctcctacccccgctgcccttcctgtaggaaca
ctggtgcttcagatccccaaccagcctggacagcctggctccacgggcatcatactggaa
ctgcctgacttttcccaggttgacccggaggtgtttgcagcgctccccagagagctccag
gaggaactgcgttcagcgtacagccgcagagagaccgcccaggcccaagggatcatcatg
gcagagcagaggaaccccctgttgcagctgaagcaggttggagtgggtcgggtgaagagg
cgctacaagaagaagaacaccaactccagtcccattaagaaaggcccctcccctctaaag
aggccccacccaccaggaaacagccctgccaaagccctacagcacccgctcagaccgagg
gacctatccaacggcctcaagctggagaatggaccttccacatcctccctaaagcaggat
gtcccagagactctgtctaagttcacccctcgccctgaacccaccctggctggagcctgt
gatttcacggacatccgaacactactcagagaatgggtcactaccatatcagaacccatg
gaggaggacattctgcaggtggtcaagtactgcactgatctgatcgaggacaaagacctg
gagaaacttgacctggtcatcaagtacatgaagaggttgatgcagcagtctgtggagtct
gtgtggagcatggcctttgacttcatcctggacaacgtgcaggtggtggtacagcagacc
tacggcagcactctgaagatcacatag

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