Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380602
Help
Entry
139380602 CDS
T10872
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocla03021
]
139380602
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
139380602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF4_int
DUF6857
Motif
Other DBs
NCBI-GeneID:
139380602
NCBI-ProteinID:
XP_070979530
LinkDB
All DBs
Position
22:complement(22110190..22143846)
Genome browser
AA seq
1245 aa
AA seq
DB search
MPTVLRDKGKLSNVSLLLRCAFQDMNHSWQSQQPSGGGQAQCFLYNPKDTKQHTTQHKQR
MYSQSKLGGMTHPHLAPHKSMLADDLKLSSDDDDADKGPEQSAPWVVNNSLSEQHTHTHG
GRVRHSSSDSSGSDSYSELEEESSGQRSLSPSPETHSDPGTPTDTQALGCTKEIYHPSTT
QWQLDKWLKKVPKKSSSCDQDPSNHDHAQRATEHRSLSPDPHRAPSPSRPWGIREDYSPS
QSPVPSPRFNYSPRHSPRPSPGYSPCPSPSPCSSPCPSPTPRHSPIPSPVLSVCPSPFPS
PRATCSLSSIPQHPPRSPSPSLTHSSPRRYPQVRSPHQESHRPPTWPSLTTSPSHRPKIR
PWTAPVPSTEPKSKPRHSPYPQPPPQHSSRPKSTQTQPVPTPKTTAKAAPALTTELSHRH
KHRPRPSPNSSPKLHSQPSLKHAHTLDPKSQHLSTSGQRPKESSRHSHNSNSNPRPSNGP
SLTTRLSTSLSPTPRAKTLPTTDPSRETSSRVGHCSKSSPKPHSLPNSKASSEPRAKFSP
SPRPKVKSWAPAPHSKLPQRKPQSREREQEVDNRRETHAPKRKVDRQTEGKGEHEVERQT
EKQGESQGKKQKERKGERQGERRLAEEQLLRRPWVQSSEEEEDVEERKRRREEREKEKYK
RRRKEQQQSGEWQAVQPKQRPHTNSERRHHPIDPQRHGTKKKRRRKSEEEERQSQPDPSP
PPSPSSPTPVVPPTDSSASSESDSEPDLPPNVTKVPADSTSSQRPIPRRGYQGPGRPADS
RPRVLYPRRTTASNPGQGHQIQGKQKLYTLVPFGRRELAAASHRGLRNLVVQIDLSLLNR
VPDTTTGTPASHKHSSSSSASSRQKEAMRHLCIPETERGDSKRKRKSENGIQHHRESKRS
NSQTNGPSAHTESTTHRRLDTHSDTRHNGFLEDYLDSTPLSDTLDPTKPPIKTQNSEPKM
EVEGCVGVSGQPRPECEPWGPPLQRAGGQRGTVTNHEPPHHAEYYMHEAKRMKHRADAMV
DKLGKAVNYVDAALSFMECGKAMEEGPLEAKSPYTMYAETVELIRYAMKLKNHSGPGARQ
EDQQLAVLCFRCLALLYWQMFRLKKDHALKYSKALLDYFKSSPKVPTTPPIWSDSGKGTG
GPPSSLSPSPSALTLGSHTGSSPSSLISIPQRIHQMAANHLNITNSVLYSYEYWEVADSL
ARDNKEFFNYLNTLSGPLTLHSSIAHAVQYTRQALQWIRISANVG
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgcctacagtcctccgcgacaagggcaaactttccaacgtctctttgttgcttcgatgt
gctttccaggacatgaaccactcctggcagtcccagcaaccctcaggaggtggccaggcc
cagtgcttcctctacaaccctaaagacacaaagcagcacactactcagcacaaacaacgt
atgtattcacagtctaagctcggggggatgacccaccctcacctggcgcctcacaaatcc
atgctcgctgatgacttgaagctcagcagtgacgatgatgatgctgacaagggccctgaa
cagtcagccccctgggttgttaacaacagtctgtcggagcagcacacacacacacatggt
gggagggtgagacattccagctcagactcttcaggctcagactcctacagtgaattggag
gaggagagcagtggccagcgctcccttagcccaagcccagaaacacactccgatcctggg
acacccaccgacactcaggcccttggctgcaccaaggagatatatcacccctccaccact
cagtggcagctggataagtggctgaaaaaagtccccaaaaaatcctcttcctgcgaccag
gatcccagcaatcacgaccacgcccagagagctacagagcaccggtcgctctccccagac
ccccacagagctccatctccatccagaccctgggggatcagagaggactacagccccagc
cagagccctgttcccagcccgcgctttaactacagccccaggcatagccctcggcctagc
cctggctacagcccctgccccagccccagcccctgttccagtccttgtcctagccccacc
ccaagacacagccccatccctagcccggtcctcagtgtctgtccaagccccttcccaagc
cccagagccacctgcagccttagttccattccccagcacccccctaggagtcctagtcct
agccttactcattctagcccccgccgctatcctcaggttcggagtccccatcaggaaagc
cacaggcctcccacgtggcctagcctaacaaccagcccgagccatagacccaaaatcagg
ccctggactgcccctgtacccagcactgagcccaagagcaagccaagacacagtccatat
cctcagcctccgcctcagcacagctccaggcctaaatccacacagacccagcctgttccc
actcccaagaccacagccaaggcagcccctgcactgaccactgagctgagccacaggcac
aaacacagacccaggcctagtcccaactcgagtcccaagcttcattctcagcctagcttg
aaacacgcacacactctagaccccaaaagccaacacctatcaacctctggacaaaggcct
aaggagagtagcagacacagccataattccaactccaaccccagacccagtaatgggcct
agtttgacaaccagactcagtaccagtctcagccccacacccagggccaagaccttaccc
accacagaccctagcagagagaccagcagcagagttggtcactgttccaaatccagccca
aagccacattctctgcctaactccaaagctagttctgagcctcgcgctaaattcagcccc
agccctagacccaaagtcaagtcctgggcccctgctccccactcaaagcttccacagagg
aagccccaatccagggagagagaacaggaggtggacaaccggagagagacccatgcacca
aagaggaaggtagacaggcagacagagggaaagggggaacatgaggtagagagacagaca
gaaaaacaaggagagagtcaggggaagaaacagaaggaaagaaagggggagagacaggga
gagagaagactggcagaggagcagttgcttagacgcccctgggtccagagctcagaggag
gaagaggacgtagaggagagaaagaggagaagggaggaaagagagaaggagaagtacaag
aggaggaggaaggagcagcagcagagtggtgaatggcaggcggtccagcccaagcagaga
cctcacaccaacagcgagcgccgtcaccatcccatcgacccacaacgccacgggaccaag
aaaaagaggaggaggaagagtgaggaggaagagagacagtctcagccggacccttcccct
ccaccatcaccctcctcccccactcctgttgtcccacccacggactcctccgcctcttca
gagtccgactcggagcccgatctgcctcccaacgtcaccaaagtcccggccgactccaca
tcaagccagcgtcccatccccaggagagggtaccagggcccagggaggcccgcggatagc
aggcccagagtgctctaccccaggcgcaccaccgcatccaacccaggccaggggcaccaa
atccagggaaagcagaaactctacaccctggtcccgtttggacgtcgtgagctggccgca
gcctcccatcgaggcctgagaaacttggtggtgcagatagacctctccctgctcaacaga
gtgcctgatactacgacaggcaccccagcctctcacaaacactcttcctcctcctcggcc
tcttccaggcagaaagaagccatgagacacctgtgcatccccgagacagagagaggagac
agcaagaggaaacgcaagtcagagaatggaatccagcaccacagagagagtaagaggagc
aactcccagaccaacggcccctctgcccacacagagtctacaacgcacagacgtctagac
actcactcagacaccagacacaacgggttcttggaggactatctggacagtacccctctc
tctgacaccctcgaccccaccaagccccccatcaaaacacagaactcagagcctaagatg
gaggttgagggttgtgttggggtgtcagggcagcctcggcccgagtgtgaaccatgggga
cctcctttacaacgggcagggggacagagaggaaccgtaaccaaccatgaacccccacat
catgctgagtactacatgcatgaagccaagaggatgaagcaccgtgcagatgccatggtg
gataagctggggaaggcagtgaactatgtggatgctgctctctccttcatggagtgtgga
aaagctatggaggagggaccactggaggccaagtctccctataccatgtacgcagagaca
gtagagcttatcaggtacgccatgaagctgaagaaccactctggcccaggggctagacag
gaagaccaacagttggccgtactgtgtttccggtgccttgctctcctatactggcagatg
tttcgtctaaagaaggatcacgccctgaagtattccaaggctctattggactactttaaa
agttctccaaaagtgcctactactcccccaatctggagcgactctggaaagggcacaggg
ggacctccctcgtccctctcccccagcccctcagccctcaccctgggctctcacactggc
agctccccctcctccctcatcagcattccccaacgtatccaccagatggcagcaaaccac
ctcaacatcaccaacagtgtcctctacagctatgagtactgggaggtagcagatagcctt
gccagagacaacaaggagttttttaactacttgaacaccctgtcggggccgttgactctc
cacagtagtattgctcatgcagtccagtacaccagacaggctctacagtggatacgcatc
agtgccaatgtgggttag
DBGET
integrated database retrieval system
