KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380685
Entry
139380685         CDS       T10872                                 
Name
(RefSeq) splicing factor U2AF 35 kDa subunit-like protein isoform X1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    139380685
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ocla03041]
    139380685
Spliceosome [BR:ocla03041]
 Complex A
  U2 snRNP components
   U2 related factors
    139380685
 Complex B
    139380685
SSDB
Motif
Pfam: zf-CCCH Torus RRM_1 zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 139380685
NCBI-ProteinID: XP_070979718
LinkDB
Position
22:complement(24286569..24299545)
AA seq 245 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKRGGGHHSRSRSRERRSRSRDRGRGGGGGGGGGGGGGGRDRERRRSRDRE
RSGRF
NT seq 738 nt   +upstreamnt  +downstreamnt
atggcggaatacctggcgtccattttcggtacagagaaagataaggtgaactgttctttc
tactttaaaattggtgcctgccgccatggtgaccgatgctccagattacataataaacca
actttcagtcagaccattgccctcttgaacatttaccgtaaccctcaaaacactgcccag
tctgccgatggtttgcgctgtgccgtcagtgatgtggagatgcaggagcactatgacgag
ttctttgaggaggtcttcacagagatggaggagaagtatggagaggtggaggagatgaac
gtgtgcgataacctgggagaccatctggttggaaacgtatatgtgaagttccgtcgtgaa
gaagacgcggagaaggcagtgatggatctgaataaccgctggttcaacggtcagcccatc
cacgccgagctctctcccgttaccgactttagagaagcctgctgccgccagtacgagatg
ggggagtgcactcgaggaggcttctgtaacttcatgcacctgaagcccatctctagggag
ctgaggagggagctatacggacgccgcaggaagaggggaggggggcatcattctcgctcc
cgttccagggaacgtcgttcgcgctcaagggacagaggaaggggaggtggaggtggaggt
ggaggtggaggtggtggaggtggacgcgaccgcgagagaaggcgctccagagaccgagaa
cgctctggaagattctaa

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