Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380745
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Entry
139380745 CDS
T10872
Name
(RefSeq) GRIP and coiled-coil domain-containing protein 2-like isoform X1
KO
K20282
GRIP and coiled-coil domain-containing protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139380745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139380745
Membrane trafficking [BR:
ocla04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
139380745
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rab_bind
GRIP
CCDC106
Motif
Other DBs
NCBI-GeneID:
139380745
NCBI-ProteinID:
XP_070979828
LinkDB
All DBs
Position
22:29508894..29533300
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AA seq
1721 aa
AA seq
DB search
MEQDTVPESVASPPPGAAKSKLDTLSKDDLIKFAKKQMAAIQKMKSKCADLEKEVDTLKS
QPTGNSDDSIIQELTERMSALLLEKAETQQSAVLLRKENEKVKQWEQDAVRKLATLQGEL
NQAKEDHQEKMATFEKTMHVSQAKHKEEVEFFQRLLREKDESGREKESEREKEKHREREK
EDTNDSVEAVSHSLESQILSLQMELAAAVERSAQEAAVLQEDHQRAQTEAQQEVENLREE
LAQHSMQHEEELRALEEDFEMERERLLLLQEELSEQLALKDSFLQDVQEEEEEPSGRSSG
IARMLELSGLSQIDASDGETETGQLRSALEDLQSQNTMLQDELTFLGNVKTQLEAELERM
REEFQTEKEELEFKIDELLMTREGATPDLNMTPYRDPLSPATPKCDLQEVPALTQLQQSG
PQREPAYNLPASSASPSSPFPDTDHQSLTLEEQQRLILEVQELRTQCETLARKNTQAVGE
CESLAKERCQAVDECEYLARERGQAVAECEHTRDILRGLETELGQRTGDFVRQYEAMKEQ
GASAIQELQERVRGLTEERESLVEKLRLLNEDRECLLEEVQGLEKRLESFLEQTQAAEGL
KEQLQTSLEEKTELALEFKTSLEEKTVLASELKASLEEKTVLASELKASLEEQTALTLEL
KASVEDLSRQNGEILSQLQMKESAVQELEDSLNVVSTERDQTLSALQEREMEVVRLREVE
GRQGQRERVAELQARIEELEKERSLLKSSLGEVQGSPGEEVEELQARIEELEKERSLLKS
SLGEVQGSPGEEVEELQARIEELEKERSLLKSSLGEVQGSPGEEVEELQARIEELEKERS
LLKSSLGEVQGSPGEEVEELQACVEELEKERNLLKCNLGELVGDTEALQRDLVEMKLANE
KMRTENQELLAQVSNATETLADKEREQKVGGETERAEKEKQEERRALQQQLTEKDKVISQ
LKSEMAVLQSTASTVSEEKTAIEFTEKIALLEKESKEKDKRMNKIKAVAVKARKELDTSR
KEAVSLKEEVEVLKAEREKVTSSMKDIIHGAEGYKNLQLDYDRQTEQLDKEREKVEGAEK
QISELTKRLNTAVQQHEQLWSEREDLMTGVETLRSTVRQMEGQTAELHRQTDTLNRDHQA
ERLLKEQKTKELSSLQKEVEELTAQLRRQKQQSQQTARELEQLRKEAQQSSLLDMEMADY
ERLVKELNTNLSEKDVCVEELKTQIHTHTQKEDTLNQEIEGLKSQLDQGEDKSAKMKQLL
VKTKKDLADAKRQEASQMMTLASLKGELETHQQELENSKIQCCDLSGERHRLHEQLRTLT
EQQQRTSSTLQHRLTSLQQEFNTAQAELSFVTTEFDSYKVRVHNVLKQQKNKSSAQSDGH
ATKQEREQMESMVDQYKAKLQDSQQSLALSTAEFQQLQMEHDTLLERHNKILQETVTKEA
ELRERLLSLQAESMSLRTELAQTVGQLTSQADAQRSGFREQIRHLQDEHRTTVETLQNQM
TRLENQLFTLQSQTAPVQTSRKPVVDRRTVDQGAMGGLGLSDLQSMAREEGEGMETTETE
SLSLPHTPLPSLEHLLTSPDPKQEPFVWQVEPTKEELSQKLATATRSMEHMNMLLHETEA
TNAVLMEQVNLLKSEVRRLERNHEREKSVANLEYLKNVLLQFIFLQSGSERQALLPVIHT
MLQLSPEEKNKLAAIAMGEEEVGGAKGSGWTSYLHSWSGIR
NT seq
5166 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggacactgtcccggagtctgtggcctcaccacctccaggtgcagcaaaatca
aagttggacacgttgtccaaggatgacctcatcaagtttgccaagaagcagatggctgcc
atccagaagatgaagtccaaatgtgcagatttggagaaggaagttgacaccctcaagtct
cagccaacaggcaattcagacgactccataatacaggagctgactgagaggatgagtgcc
ttgctgctggagaaggctgagacccagcagagtgcagtgttgctgcggaaggagaatgag
aaggtcaagcagtgggaacaggatgcagtaagaaaactggccaccctgcagggagagttg
aaccaggccaaggaagaccaccaggaaaagatggccacttttgagaagaccatgcacgta
tcccaggccaaacataaagaagaagtcgaattctttcagaggcttctgagagagaaagac
gagagtggcagagagaaagagagcgaaagagagaaagaaaagcatagggaaagagaaaag
gaagatacaaacgacagtgtagaagctgttagtcacagcctggagtcgcagatcttgagt
ctgcagatggagctagctgcagcggtggagcgaagtgcccaggaggctgcagtgctgcag
gaggaccaccagagggcgcagacagaggcccagcaagaagtagagaacctacgagaagag
ttggcccagcatagcatgcaacatgaagaggagctgagagctctggaggaggactttgag
atggagagagagagactgcttctcctccaagaggagctcagtgagcagctcgctctcaaa
gacagtttcttgcaggatgtgcaggaggaagaggaggagcctagcggccgcagctcggga
attgccaggatgttggagctgtctggtttaagtcagattgatgccagtgatggagagacg
gagactggacagcttcgatccgccttggaggacctgcaatcccagaatacaatgctgcaa
gacgaactgaccttcttgggcaatgtgaagactcaactggaggcggagcttgagaggatg
agggaggagtttcagacagagaaggaggagctagaatttaagatcgatgagttgctgatg
acccgggagggtgcgacccctgacctgaatatgaccccttaccgagaccctctgagcccg
gcaactcccaagtgtgaccttcaggaggttccagcccttactcagctccagcagagtggg
ccacagagagaaccagcgtacaacctgcctgccagctctgctagcccctccagccctttc
cctgacacagaccaccagagtttgaccctggaagaacagcagagactgatcctagaggtt
caggagctgaggacccagtgtgagaccttagctagaaagaatacccaggcggtgggtgaa
tgtgagtctctagccaaagagaggtgccaggcagtggatgaatgtgagtacctagccaga
gagagggggcaggcggtggctgagtgcgaacacaccagagacatcctgagaggcctggag
actgagctaggtcagaggactggggacttcgtcagacaatatgaagctatgaaggaacag
ggggcgtcagcgatccaggagctacaggagagagtcagagggctaactgaggagagagag
agtctggtagagaagttgagactgctgaatgaagacagagaatgcctattggaggaggtc
cagggcctggagaagaggctggagagcttcttggagcagacacaggcagccgaggggctg
aaggagcagctgcagacatctctggaggagaagacagaattagctctcgagtttaagacc
tctctggaggagaagactgtgttagcctctgagctaaaggcctctcttgaggagaagact
gtgttagcctctgagctaaaggcctctcttgaggagcagacagcgttaaccctcgagcta
aaggcttcagtggaggatctgagcaggcagaatggggagatcctctctcagctacagatg
aaggagagtgctgttcaggagttggaggattcactcaatgtggtgagcacagagagggac
caaacactgtcagcactgcaggagagagagatggaggtggtgaggctgagggaggtggag
gggaggcaaggccaaagagaaagggtggctgagctacaggctcgtatagaggagctggag
aaggagaggagcctgctgaagagcagcctaggggaggtgcaggggagcccaggggaggag
gtggaggagctacaggctcgtatagaggagctggagaaggagaggagcctgctgaagagc
agcctaggggaggtgcaggggagcccaggggaggaggtggaggagctacaggctcgtata
gaggagctggagaaggagaggagcctgctgaagagcagcctaggggaggtgcaggggagc
ccaggggaggaggtggaggagctacaggctcgtatagaggagctggagaaggagaggagc
ctgctgaagagcagcctaggggaggtgcaggggagcccaggggaggaggtggaggagctg
caggcttgtgtagaggagcttgaaaaggagaggaacctcctgaagtgtaatctgggggag
ctggtgggagatactgaagctctacagagagacctggtagagatgaaacttgccaatgag
aagatgagaacagagaatcaggaattattggcccaggtcagcaacgctacagagacactg
gcagacaaagagagggagcagaaggtgggaggagagactgagagagcggagaaggaaaaa
caagaggagaggagagcgctacaacagcagctaacagaaaaagacaaagtcatatcccag
ctgaagagtgagatggctgtcctgcagtctacagcctccactgtctcagaggagaagaca
gccatagagttcactgagaaaatcgccctgctggagaaggaaagcaaagagaaggataag
aggatgaataagatcaaggcggtggctgtgaaagccaggaaggagctggacaccagcagg
aaagaggctgtgtctctgaaggaggaagtggaggtgttgaaggctgagcgagagaaagtg
accagctcaatgaaagacatcattcatggagcagagggatacaagaacttacagttggac
tacgacagacagacagagcagctggataaggagagagagaaggtggagggagctgagaaa
cagatctccgagctgaccaaacgactcaacaccgccgtacaacagcatgagcagctgtgg
tcggagagagaggacctgatgactggagtggagacgctgaggagcacggtgagacagatg
gaaggacagacagcagagctgcacaggcagacagacaccctgaacagagaccatcaggct
gagagactactgaaggaacaaaagacaaaggagctgtcgtcgttgcagaaggaggtagag
gagttgaccgctcagctccgcagacagaagcagcagtctcagcagactgcacgggagctg
gagcagctacgcaaggaggcccagcagagctcgttgttggacatggagatggcagactat
gaacgcctggtcaaagaactcaacaccaacctgtcagagaaggacgtgtgtgtggaggag
ctgaaaacacagatacacacacacactcagaaagaagacacactcaaccaggagattgag
ggtctgaagtcccagctggaccagggggaggacaagagcgccaagatgaaacagctgctg
gtgaaaaccaagaaagatctggcggacgccaagcgacaggaagcctctcagatgatgacc
ctggcctctctgaagggagaactggagacccaccaacaggagctagagaacagtaagatc
cagtgctgtgacctgtctggggagcgccaccggctgcatgagcagctgaggactctgacg
gaacaacagcagagaacaagcagcaccctgcaacaccgactgacctcactacagcaggag
ttcaacactgcccaggctgagctgtcatttgtcactactgagtttgacagctataaggtc
agagttcacaatgtcctcaaacagcagaagaacaagagttcggcccagagtgacggacac
gccaccaaacaggagagagagcagatggagtccatggtggaccagtataaagccaagctg
caggacagtcagcagagtctggcattgagcactgcagagttccaacagctccagatggaa
cacgacacactgctggaacgacacaacaagatactgcaggagaccgtcactaaagaggcc
gaactcagagagcgactcctgtctctccaggcagagagtatgtcgctgcggacagagctt
gcccagacggtgggtcaacttacctcccaggctgacgcccaacgctcagggttccgggag
cagatccgccaccttcaggacgaacacagaactacagtagagaccctgcagaaccagatg
acccggctggagaaccaactattcacattgcagagccagaccgctccagtccagaccagt
cgtaagccagtggtggaccgccggactgtggaccagggggcgatgggggggctgggcctc
agtgacctacagtccatggctagagaggagggggagggcatggagaccactgagacagag
tccctgtccctcccacacacacccctaccctcactggagcatctactcacctccccagac
cccaaacaggagccgtttgtgtggcaggtggagccgactaaagaggagttaagtcagaag
ttggccacagctacacgcagtatggaacacatgaacatgctactgcatgagacagaggct
accaacgctgttctgatggaacaggtcaatctgttgaagtctgaggtgcgtcgtctggag
cgtaaccatgagagggagaagagtgtagccaacctggagtatctgaagaatgtcctcctg
cagttcatcttcctgcagtcaggcagcgagagacaggctctactccccgtcatacacacc
atgttacaactcagccctgaggagaagaataaactggctgctatcgcaatgggtgaggag
gaggtgggaggagctaaaggctcaggatggacctcctaccttcacagctggtctggcatc
agatga
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integrated database retrieval system
