Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380758
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Entry
139380758 CDS
T10872
Name
(RefSeq) guanylate-binding protein 1-like isoform X1
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
139380758
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
malic
Motif
Other DBs
NCBI-GeneID:
139380758
NCBI-ProteinID:
XP_070979860
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All DBs
Position
22:complement(30903164..30913062)
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AA seq
690 aa
AA seq
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MDSPMCLVENADGELHVVPGAIRYLMGLNQQVVVVAVVGLYRTGKSYLMNKLAGKRQGFA
LGATIQSKTKGIWMWCVPHPEKRDHTLVLLDTEGLGDVEKGDSKNDAWIFSLAILLSSTL
VYNSRGTIDNQAVENLQYVSELTERIKVNSSSAASSSHDDEEGGDAQFVQFFPNFVWTIR
DFTLLLEIDGRNVTEDEYLEHSLELRKGGGKKNLMYNLPRECIRNYFPSRKCFVFPTPTT
PANMPHLDSMDEADLCGSFRKVADTFCRFIFQESRTKTVKGGHKVTGRMLGHLVKTYVET
IAKGSVPCLENAVLAMAQIENQAAVVEGQAVYQRCMEEVKALFPVAMGQISAHHLRSDHQ
ATQAFMKRSFKDENGDFLKALAVAISKHYADLLIQNEDASEKKCAALLEKLSVPMAQKIT
EGIYATPGGYELYCSHHDNMVAQYRAEPDKGVRAEEILEQFLRDKSLEKNSILQADKKLT
ENEKKIHEEQEKRALAEQAVKMEAEKQHQLEKLIQERERSHQEGICQLETKMVQEAKEKQ
HELERALDSKLREQEKLMAKGFTEKEAAMKEEIQSLREKEEAKREEKEEQSRNFRAIAQG
VMESVSNSLGHYFNYKKAREQRKALVFKEQVRFNLKSGAVGNIPDKEGMTLKQDKTATPK
LETGAVGNSKDTTLPKVNTGTTDKSPGSEV
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggattccccaatgtgcctggtcgaaaacgccgacggcgagcttcatgtagttcctggt
gccatcaggtacctgatgggactgaaccagcaagtcgtagtggtggcggtggtcgggctg
taccgcacgggcaagtcctacctcatgaacaagctggctggaaagagacaaggttttgcc
cttggcgccaccatccaatctaagactaagggaatctggatgtggtgtgtgcctcatcct
gaaaaaagagaccacaccctggtgctgctggatacagaggggctgggggatgtggagaag
ggagattctaagaatgatgcctggatcttctccttggccattctgttaagcagtactctg
gtctacaacagtcgagggaccatcgacaatcaagccgtggagaacctccaatatgtgagt
gagctgacagagcggatcaaggtgaattcttccagtgcagcttcatcctctcacgatgac
gaggaaggaggggatgcccagtttgtgcagttctttccaaattttgtgtggaccatcaga
gatttcactctactactcgagatcgacggtagaaacgtcaccgaagatgagtatctggag
cattccctggaactcagaaaaggtgggggtaaaaagaacctgatgtacaacctcccacga
gagtgcatccggaactacttcccctcacgcaagtgctttgtattccccactcctacaact
cctgccaacatgccccatctggattccatggacgaggctgacctctgtggaagcttccga
aaggttgcagatactttctgccgcttcattttccaggagagccgtacaaaaactgtcaaa
gggggccacaaagtaaccgggagaatgctcggccacttggttaaaacctatgtggagacc
atagccaaaggctctgtgccctgtctggagaatgcagtgctggccatggctcaaattgag
aaccaggctgctgtggttgagggccaggcggtataccagaggtgtatggaggaggtgaag
gccttattccctgtggccatgggtcagatttcagctcatcacctccgctcagaccaccag
gccacgcaggctttcatgaaacgatccttcaaagacgaaaatggggatttcttgaaagcg
ttggcggtggccatttcaaagcactacgctgaccttctcatccagaacgaggatgcctca
gagaagaagtgtgcggcccttctggagaagctgtctgttccaatggcccagaagattacg
gaggggatctatgccacacctggaggatatgagctttactgcagtcaccatgacaacatg
gtggcacaataccgggccgagcctgataaaggagttagggctgaggagattcttgagcag
ttcctgagggataagagtctagagaagaattccatcctgcaagctgacaaaaaattgacc
gaaaatgagaaaaagatccacgaggagcaagagaagagagccctggctgaacaggcagtg
aagatggaggcagagaaacagcaccagttagagaaactgatccaggagagggagaggagt
catcaggagggaatctgtcagctagagactaagatggtccaggaggcgaaggagaagcaa
catgagttggagagagcgctagatagcaagctccgtgagcaggaaaagctgatggctaag
ggcttcacagagaaagaggcagccatgaaggaggagatacagagcctgagggagaaggag
gaggccaagcgcgaggagaaggaagagcagtctcgtaacttcagagccatagcacagggt
gtcatggaaagtgtcagcaatagcttaggtcactactttaactataagaaagcccgtgag
caacgcaaggcgcttgtgttcaaggagcaggtcagattcaatctcaaatcaggtgcggtt
ggcaatatccctgataaggagggcatgacactcaagcaagacaagacggccacgcccaaa
ctcgaaacaggagcagttggcaactctaaagacacaactctgcccaaagtcaacacaggt
acaactgacaaaagccctggctcagaggtctaa
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