Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380786
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Entry
139380786 CDS
T10872
Name
(RefSeq) B-cell receptor CD22-like
KO
K06467
CD22 antigen
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
139380786
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139380786
04090 CD molecules [BR:
ocla04090
]
139380786
04091 Lectins [BR:
ocla04091
]
139380786
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
SIGLEC family
139380786
CD molecules [BR:
ocla04090
]
Proteins
139380786
Lectins [BR:
ocla04091
]
I-type lectins (Siglecs)
139380786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
ig
Ig_7
I-set
V-set
C2-set_2
Ig_C17orf99
DUF3485
Motif
Other DBs
NCBI-GeneID:
139380786
NCBI-ProteinID:
XP_070979917
LinkDB
All DBs
Position
2:28802957..28822328
Genome browser
AA seq
1330 aa
AA seq
DB search
MAGALRFLLSGCLLQGVLCEDWTALMPQSIEALKGSCVRIPCSFTLGSIKAVDYNPCLKT
HSCNAIWMRGGTDKTNTVGSSPSGNLNQKDCTTILDNMPTGDKLYFRLECGNCVKFNFGT
PVQINIADTPPTPTLTPATVEVREGTSVSLICSAAAPCPSLHPTLTWTPSLGQSEEGLQE
NQDKTQVKTSSLTFTASYLHHEQNISCTALYKQQDGKNVKSPETSLTVTVLFSPKNTSVS
VSPSGSVLEGSSMTLTCSGNANPAVSYTWYRVNGVQVTTVGSSRMLTIQVSANNSQFYCE
ARNDHGTENSSVIQLDLPYPPMYTSVLVSPSGPVVEGSSVTLTCSSNANPAVKTYTWYRV
NGVQVTLIGHGEKHQTQVYTDQRKFYCEAKNVHGTQNSSVFELDVMYSPKNTSVSVSPSG
SMIEGSSVTLTCNSNANPAVKTYTWYTIRGGRGTPVKNMPELTVQVLTDNSMFYCEAKND
HGIQKSSAFQLDMMYPPKNTSVSVSPSDSVLEGSSVTLTCSSNANPVGTYAWYRVIGDQV
TSIGHGNKHQTQVYTDHRQFYCGATNDHGTKNSSVIELDVLYPPKNTSVSVSPSGSVLEG
SSVTLTCSSNANPAVKNYTWYRVNGDHVTQIANERELKTEASIDQFYCEARNDHGTKNSS
IILLNVLYPPKNSSVSVSPSSSAIEGSSVTLTCSSNANPPVGSYTWHRVNQEQVTEVGSS
RMLTIKVPADNSQFYCETRNRLGSQNSSVTQLDGMYPAKNTSLSVSPSGSVVEGSSVTLT
CSSNANPAVKTYTWYRVNGREGVIVGSGQSFTFNKIVISDSGRYYCEAENKHGVDNSTTT
YIDVTYPPKNTSVSVSPSSSAIEGSSVTLTCSSNANPPVVSYTWHRVNQEQVTEVGSSRM
LTIKVPADNSQFYCETRNRLGSQNSSVTQLDGMYPAKNTSLSVSPSGSVVEGSSVTLTCS
SNANPAVKTYTWYRVNGREGVIVGSGQSFTFNKIAINDGGRYYCEAKNKHGVDNSTTTYI
DVTFAPKILPSSRCIRTADQINCTCESHGNPSPEVEWRLAGSPVNHFTNTVVRERMGSTG
LRSSLTTHQSQEEDTPPLVCLSTNSVGSSSLQFCIQCLGSHQGLGKSVEVLEGQVSLPIF
ITAIFVSVLMTALICALLYLRRVWYPCFTVLRGHYKYYDSDVGMNLVPTSGERTQDPPAP
EEDIYANSMIPSQARRQGRKQDLEAPNLGPKPLPSSKTISETDRTSLPNLIADTATNPGE
GTAKKEGEDVFYSSVIWKKKKWMKKKNEGSVDGGREASSGSYLEEERCVLGNVGRHRISK
VLEMDHLQFL
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggctggcgctttaagattcctcctcagtggctgtctgctgcaaggtgttctctgtgaa
gattggacagccttgatgcctcagagtatagaggctctgaagggatcatgtgtgcgcatt
ccctgctcatttacacttggttccataaaggcagtggactataatccctgcctaaaaact
cactcatgtaatgccatttggatgagagggggaacagataagacaaacacagtaggctcc
agtccatctgggaacttgaaccagaaagactgtactacaatcctggacaacatgcctact
ggtgacaagctttacttcagactagaatgtggcaactgtgtcaagtttaattttggcaca
cctgttcaaatcaatatcgcagacactccccccacacccactctaaccccagctacagtg
gaagtgagggaggggacctcagtgagtttgatttgctctgctgcagccccatgtccctct
ctccacccaactctgacatggacccccagtctgggtcaaagtgaggagggactacaggag
aatcaggataaaactcaagtcaagacctcttctctgaccttcactgcttcatacctccat
catgaacagaatatctcctgcactgctctctacaaacaacaagatggcaagaatgtcaaa
tcacctgaaactagtctgaccgtcacggttctattttctcccaagaacacctcagtgtca
gtcagtccctctggttcagtgttagagggcagctccatgactctgacctgcagcggcaat
gccaacccagcagtgagctacacctggtacagagtcaatggagttcaggtgacaacagtg
gggtctagcagaatgctaactatccaggtgtctgcaaacaacagtcagttctactgtgaa
gccagaaatgaccatggaaccgagaactcctctgtcattcaactagatttgccatatcct
cccatgtatacctcagtgttagtcagtccctctggtccagtggtagagggcagctctgtg
actctgacctgcagcagcaatgccaacccagcagtgaagacctacacctggtacagagtc
aatggagttcaggtgacattaataggacatggagagaaacatcagacccaggtgtacaca
gatcaaagaaagttctactgtgaggctaaaaatgtccatggaacacagaactcatcagtc
tttgaactggatgttatgtactccccaaagaacacctcagtgtcagtcagtccctctggt
tcaatgatagagggcagctctgtgactctgacctgcaacagcaatgccaacccagcagtg
aagacctacacctggtacacaatcaggggaggtcgggggacaccagtgaagaatatgcca
gagctaactgtccaggtgttgacagataacagcatgttctactgtgaggccaaaaatgac
catggaatccagaaatcatctgcctttcaactagatatgatgtaccctcccaagaacacc
tcagtgtcagtcagtccctctgattcagtgttagagggcagctctgtgactctgacctgc
agcagcaatgctaacccagtggggacctacgcctggtacagagtcattggagatcaggtg
acatcaataggacatggaaacaaacatcagacccaggtgtacacagatcacagacagttt
tactgtggtgccacaaatgaccatggcactaagaactcatcagtcattgaactggatgta
ttgtatcctccaaagaacacctcagtgtcagtcagtccctctggttcagtgttagagggc
agctctgtgactctgacctgcagcagcaatgccaacccagcagtgaaaaactacacctgg
tacagagtcaatggagaccatgtgacacaaattgctaatgaaagagagttaaaaacggaa
gcatctatagaccagttctactgtgaggccagaaatgaccatggtacaaagaactcatca
atcattctactgaatgtgctatacccaccaaaaaacagctcagtgtcagtcagtccctct
agttcagcaatagagggcagctctgtgactctgacctgcagcagcaatgccaacccacca
gtggggagctacacctggcacagagtcaatcaagaacaggtcacagaagtgggatctagc
agaatgctaactatcaaggtacccgcagacaacagccagttttattgtgagaccagaaat
cgtcttggatcccagaactcatctgtcactcaactagatgggatgtatcctgccaagaac
acctcattgtcggtcagtccctctggttcagtggtagagggcagctctgtgactctgacc
tgcagcagcaatgccaacccagcagtgaagacctacacctggtacagagtcaatgggagg
gagggagtcattgtaggatctggacagagcttcaccttcaataagattgttatcagtgat
agtgggcggtactattgcgaagcagagaacaagcatggggtggacaactcaacaactact
tacatagatgtgacatacccaccaaagaacacctcagtatcagtcagtccctctagttca
gcaatagagggcagctctgtgactctgacctgcagcagcaatgccaacccaccagtggtg
agctacacctggcacagagtcaatcaagaacaggtcacagaagtgggatctagcagaatg
ctaactatcaaggtacccgcagacaacagccagttctattgtgagaccagaaatcgtctt
ggatcccagaactcatctgtcactcaactagatgggatgtatcctgccaagaacacctca
ttgtcggtcagtccctctggttcagtggtagaaggcagctctgtgactctgacctgcagc
agcaatgccaacccagcagtgaagacctacacctggtacagagtcaatgggagggaggga
gtcattgtaggatctggacagagcttcaccttcaataagattgctatcaatgatggtggg
cggtactattgcgaagcaaagaacaagcatggggtggacaactcaacaactacttacata
gatgtgacatttgctccaaagattctgccctcctctcgctgcatcagaactgctgatcag
atcaactgtacctgtgagagtcatgggaacccctctcccgaagtggagtggcgattggct
ggatcgcctgtcaatcactttactaacactgtcgtcagagagcgaatgggcagcacaggc
ctgagaagctccctcaccacccaccaatcacaggaggaggacacgccccctctggtctgc
ctcagcaccaactctgtaggatcttccagcctccagttctgtattcaatgcctggggagt
caccaggggctgggaaaaagcgttgaagttcttgagggtcaagtttccttgccaatcttc
atcactgcaatatttgtttcggtattaatgacagcactgatatgtgctttactgtatctc
cgaagggtttggtatccttgttttacggtactcagaggtcattacaaatattacgacagt
gatgtggggatgaacctagttccgaccagtggtgagaggacacaggatcctcctgcgcca
gaagaagacatatacgccaacagcatgataccgagtcaggccaggagacagggacgcaaa
caagacctagaggccccgaatctgggtcccaaacccctgccttcctccaaaaccatctct
gagaccgaccgaaccagcctgcccaatctaatcgctgacactgctacaaatccaggagaa
ggcactgcaaagaaggagggggaggatgtgttttattccagtgtgatttggaagaagaag
aagtggatgaagaagaagaatgaggggtccgtggacgggggaagggaggcgtctagcggt
tcctatctggaggaggaaaggtgtgtgctgggaaatgtaggcagacacagaataagtaag
gtactggagatggatcacctgcagtttctctag
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