Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380823
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Entry
139380823 CDS
T10872
Name
(RefSeq) unconventional myosin-Ib-like isoform X1
KO
K10356
myosin I
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
139380823
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocla01009
]
139380823
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139380823
03036 Chromosome and associated proteins [BR:
ocla03036
]
139380823
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139380823
04147 Exosome [BR:
ocla04147
]
139380823
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139380823
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Phagocytosis
Others
139380823
Others
Actin-binding proteins
Myosins
139380823
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
139380823
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
139380823
Exosome [BR:
ocla04147
]
Exosomal proteins
Proteins found in most exosomes
139380823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
IQ
nSTAND3
AAA_16
AAA_22
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
139380823
NCBI-ProteinID:
XP_070980008
LinkDB
All DBs
Position
22:34900226..35066623
Genome browser
AA seq
1166 aa
AA seq
DB search
MEVKTSLLDNMIGVGDMVLLEPLNEDSFIENLRKRFDHNEIYTYIGSVVISMNPYRSLPI
FTPEKVEEYRNRNFYELSPHIYALADEAYRSLRDQDKDQCILITGESGAGKTEASKLVMS
YVAAVCGRGQEVNKVKEQLLQSNPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFKGDPLGG
VISNYLLEKSRVCKQPRGERNFHIFYQLLSGASGDTLTKLKLDRDFSKYNYLSLDSATVN
GLDDAASFRTVRNAMQIVGFMEDEVQLVLELVAAVLKLGNIEFKPESRVNGFDESRVKDK
NDLKEMCELLGIEQSVLERAFSYRTVEAKMEKVSTTLNVAQAYYARDALAKNLYSRLFSW
LVTRINESIKAQAKTRHKVMGVLDIYGFEIFEDNSFEQFIINYCNEKLQQIFIELTLREE
QEEYVREGIEWTNIEYFNNAIICDLIENNQNGILAMLDEECLRPGTVTDDTFLDKLNTIC
AEHQHFESRLSKNSKFLTDHSLPHSCFRIQHYAGKVLYRVEGFVDKNNDLLYRDLSQAMY
KATHSLMRQLFPEGNPAKVNLKRPPTAGFQFKASVGGLMRNLQTKNPNYIRCIKPNDKKA
AHIFTDSLVCHQVRYLGLMENVRVRRAGYAFRQPYEPCLERYKMLCKQTWPHWRGPARDG
VEVLLTDCSVPAEEFAYGRSKIFIRNPRTLFTLEERRRACLEDLATLIQKIYRGWKCRTH
FLLLKKSQVVVAAWYRRYAQQKKYEKIKSATLVMQSFTRGWKARKILRQLKYEKRCKEAV
TTIAAYWHGTQARMELRRLKTEARNKHAVSVIWAYWQGTKARRELRFLKKEAREKHAVSV
IWAGWQGTKARRELRCLKEEARRKHAVAVIWAYWRGLQVRREYRKFFRANAGKKIYCFII
QRIMQKYFLGLKTTVPSMSPIDNTWSAQPYSFLEGAHTELRRIFHLWRCKKHRGQFTEEK
KAVYEEKLEASEIFKNKKALYPSSVSQPFKGDYLEIHKNPKYQKLNSAVEEKVLLADVVN
KINRANGKGSPRLFLLTKNNFVLADQKTGQVKASVPLPDLTSVSVSTQSDGFFALKLKEG
SASAAKGDFLLNSEHLIEIITKLHRTWTTAADKDQINIDISDEFLVQFKQDKVCVKFIQG
GPKNGTSAACKRKNNRLLEVSVPSSP
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaagacgtcacttctagacaacatgataggagtgggggacatggtcctgcta
gaacctctcaacgaagactccttcatcgagaacctgaggaaacgcttcgaccacaatgag
atctacacatacatcggcagtgtggtgatctccatgaacccctacaggtctctgcctatc
ttcacaccagagaaggtggaggaatatcgcaacaggaacttctacgagctcagcccacac
atctatgccctggcagacgaggcctaccgttctctgagggaccaggataaagaccagtgt
atcctcatcacaggagagagtggagctggaaagaccgaggccagtaagctggtgatgtca
tatgtggcggcggtgtgtgggaggggccaggaggtgaacaaggtgaaggagcagctgctg
cagtcaaatcccgtgctggaggctttcgggaatgctaaaactgtgagaaatgacaactca
tcccgatttggaaaatacatggacattgagtttgacttcaaaggagaccctctgggtgga
gttattagcaactatttgttggagaagtccagggtttgcaagcagccaagaggagagaga
aacttccacatcttctaccagcttctttctggagcttcaggtgacaccctgacgaagctg
aagttggacagagacttcagtaagtacaactacctgagtctggattcagccaccgtcaat
ggactagacgacgcagcaagctttaggaccgtcaggaatgcaatgcagattgtgggtttt
atggaggatgaggtgcagttggtcctagagctggtagcagccgtcctcaaattggggaac
attgagttcaaaccagagtccagggtcaacggcttcgacgaaagcagggtcaaggacaag
aatgacctgaaggagatgtgtgagctgttgggtattgagcagtctgtgctggagagggct
ttcagctaccgcaccgtggaagccaagatggagaaggtgtctaccacactcaacgtggcc
caggcctactatgcccgtgatgccctggccaaaaacctctacagccgtctgttcagctgg
ctggtcaccaggatcaatgaaagcatcaaggctcaggccaaaacacgccacaaggtgatg
ggagtcctggacatctatggttttgaaatatttgaggacaacagctttgaacagttcatc
atcaactactgcaacgagaagcttcagcagatcttcatcgaactgacgctacgtgaagag
caggaggagtacgtaagagagggcattgaatggaccaacattgagtatttcaacaacgcc
attatctgtgacctcattgagaataaccagaatggtatcctggccatgttggatgaggaa
tgtctcaggccaggcacagtgactgatgacaccttcctagacaagctcaacaccatctgt
gctgagcaccagcactttgagagtcgcctcagcaagaactccaagttcctgacagaccac
agcttgcctcacagctgcttccgcatccaacactacgctgggaaagtgctgtaccgtgtg
gagggctttgtagacaagaacaatgacctgctgtacagagacctgtctcaggccatgtac
aaggccacccacagtctgatgagacagctgtttcctgagggaaaccctgcgaaggtcaac
ctgaagagaccccccaccgcaggcttccagttcaaggcctctgtagggggactaatgagg
aacctgcagaccaagaaccccaactacatcaggtgcatcaagcccaacgataagaaggca
gcccacatcttcaccgactcactggtgtgtcaccaggtgcgttacctgggtctgatggag
aatgtgcgtgtgaggagggcaggctatgcattccgccagccctacgagccctgtctggag
cggtacaagatgctctgcaagcagacctggcctcactggagaggacccgcgagggatgga
gtggaggtgctgctgacagactgttctgttccagctgaggagtttgcctacggacgctcc
aaaatcttcatcaggaaccccagaacgctgttcaccctggaggagaggagaagggcgtgt
ctggaggacctggccaccctgattcagaagatctaccgggggtggaagtgtcgtactcac
ttcctcctgctgaagaaaagccaggtggtggtagcagcctggtaccgcagatatgcacaa
caaaagaaatatgagaagatcaagagtgctacactagtgatgcagtccttcaccagaggg
tggaaggcccgcaagatcttgcggcagctgaaatacgagaagagatgcaaggaggcagtg
actaccattgcagcgtactggcacgggacccaggcccggatggagctgcggcgcctaaag
acggaggcacggaataagcatgccgtgtctgtcatatgggcatactggcaggggaccaag
gctcggcgagaactgcggtttctaaagaaggaggcgcgagaaaagcacgctgtgtctgtc
atttgggctggctggcaggggaccaaggcacgcagggagctaaggtgcctgaaggaggag
gccaggcgtaagcacgccgtcgccgtcatttgggcctactggcggggactccaggttcgc
cgggagtacaggaagttctttagggccaacgctggcaagaagatctactgctttatcatc
cagagaatcatgcagaagtacttcctgggtctgaagactaccgtgccctccatgtcaccc
atagacaacacctggtcggcccagccttacagcttcctggagggagctcacactgagctc
aggaggatcttccacctctggaggtgcaagaagcaccggggccagttcacagaggagaag
aaggctgtgtacgaggagaaactggaggccagtgagatcttcaagaacaaaaaggctctg
taccccagcagcgtgagccagcctttcaaaggagactatctagagatccataagaaccct
aagtaccagaagctgaacagtgctgtggaggagaaggtgctactggctgacgtggtgaac
aagatcaaccgggccaacggcaaggggtcaccaaggctcttcttgttgaccaaaaacaac
tttgtcttagctgaccagaagacaggccaggtgaaggccagcgtgccgctgccagacctc
accagcgtgtcggtcagcactcagagtgacggcttcttcgccctcaagctcaaagagggc
tctgcttcagctgccaaaggtgacttcctgctaaacagtgagcatcttattgagatcatc
accaaactccaccgcacatggaccaccgctgcagacaaggaccaaatcaacattgatatc
tcagacgagttcctcgttcagttcaagcaggacaaggtgtgtgtcaagttcatccagggg
gggcctaagaacggcaccagtgctgcctgcaagcgcaagaacaaccgcctactggaggtg
tctgtgccatcatcgccatag
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integrated database retrieval system
