Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380833
Help
Entry
139380833 CDS
T10872
Name
(RefSeq) CLIP-associating protein 1-A-like
KO
K16578
CLIP-associating protein 1/2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139380833
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139380833
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
139380833
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
139380833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
TOR1L1_N
HEAT_2
RTP1_C1
Cnd1
Sec7-like_HUS
HEAT_DAAF5
ParcG
MMS19_C
TAN
Motif
Other DBs
NCBI-GeneID:
139380833
NCBI-ProteinID:
XP_070980025
LinkDB
All DBs
Position
22:complement(36431332..36552157)
Genome browser
AA seq
1556 aa
AA seq
DB search
MEVNMEYCLAQVVQKDLGRKVQVGQELIDYILDKDRSQDLEQDQTGLDRMVDSIATTWVN
CSNFKVALLGIDLLSVLVTRLQDRFRNHVGTVLPSLIDRLGDSKDQVRDQDQILLLKIME
QAATPQYVWDRMLGGFKHKNNRTREGVCLCLISTLNMYGAQGLTLSKIVPHICNLLGDPT
SQVRDGAMGCLVEIYRHVGERVRMDLSKKGLPQSRLNVIFSRFDEVQRSGNMIPSSGSDK
NFDDEDSVDGGRSCSSASSSKAPPSGRRTVAAASVRRPSSATGPGKISAKDAAAGAVDEE
DFIKAFEEVPTIQIHSNREMEDNLSKVREVLSDDKNDWEHRVIALKKVRSLLLAGALEYE
SFPQQLRLLEAPLKLSAKDLRSQVVREACITLGYLSTLMGNKFDHCAETLMPTLLNLVPN
SAKVMATSGMAAIRLILRHTHYSRLIPIITSNCTSKSVAVRRRSYEFLELLLLEWQTHTL
ERHVAILTETIKKGIHDADSEARSVARKCYWGFHGHYSREAEHLFQALESTYQKALQSHL
KSSDSVVSLHQSDRSSSSSQESLNRPLSVKSVIGGDMTRGKMVSSRVNSNPGGSLQRSRS
DIDVNAAASAKSCLVTVPSASPFSSAATLPPGSYASLGRVRTRRTSAGSAVGASATVTDS
RGRSRAKMVSQSQRSRSANPTGGGKARTSSNQTGSRSSSPGKLLGHSSGYGRISRPPSAS
STPADKRSKVPRSQGCSRDSSPSRLGLARSRIPRPSMSQGCSRDTSRESSRDTSPARGFK
PLASRRTSRSTSALSTADPHGQSDRFGLIHQDRISASVNAMRVLNTGTEVEAAVADALLL
GDSRNNKRKPMRRRYESPGIYSDDDANSDASSACSERSYGSRNGGIPHYLRQTEDVAEVL
NHCASSNWSERKEGLLGLQNLLKNQRTLSRVELKRLCEIFSRMFADPHSKVFSMFLETLL
DFILVHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDITRESFPFDQQFNILMRF
IVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKA
AQVVLISLFELNTPEFTMLLGALPKTFQDGATKLLQNHLKNSSNTSSVSSPSNTIGRTPS
RHPPSRTSPLTSPTNCSHGGLSPSMLEYDTENMNSDEIYSSLRGVTEAIQSFSYRSQEDL
NELRGKRDDAAGREGVAPSPGSDARLGLDVVEGGRTALDNKTSLLNTPSPRSFSGPRTRE
FAPYGYGDTITSSYDKSALKEAVFDDDVEQFRDCRRQDSSGENKMVLSKGFAPGSQDHSD
LVADLLKELSNHNERVEERKGALVELLKITREDSLAVWDEHFKTILLLLLETLGDKDYTI
RAMALRVLKEILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEESASTLAGSIHPEQ
CIKVLCPIVQTADYPINLAAIKMQTKVIERITKESLHQLLPDIIPGLLQGYDNTESSVRK
ASVFCLVAIYSVIGEELKPHLQLLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSSHS
NT seq
4671 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcaatatggagtactgtctggcccaggtggtgcagaaagacctggggaggaag
gtgcaggtgggacaggagctcatagattacatcctggataaggataggtcccaggatctg
gagcaagaccagacaggtctggacaggatggtggacagcatcgctaccacctgggtcaac
tgttccaacttcaaggtggctttgcttggaatagaccttttatctgtcctagtgacaagg
ttacaggaccgatttaggaaccatgtgggaacagtactgcccagtctgatagatcgtctg
ggggattccaaagaccaagtcagagaccaagatcaaatcctgctgctgaagatcatggag
caggctgccaccccacagtacgtttgggacagaatgctgggaggcttcaaacacaagaac
aacaggaccagagagggagtgtgcctttgtctcatctcaacgctcaacatgtacggagcc
caaggcttaaccctcagtaaaatagtccctcacatatgtaatctactaggagatcccacc
agccaggtgagagacggagctatgggctgcctggtggagatctacagacatgtgggggag
agggtgaggatggacctcagcaagaagggcctaccacagtcacggttgaatgtaatcttc
agtagatttgatgaagtccaaagatctgggaacatgatcccatcctcgggttcagataag
aactttgatgatgaggactctgtggatgggggccggtcctgctcctccgcatcgtcctcc
aaggcgccccccagcgggaggaggactgtagctgcagcttctgtccgcaggcccagctct
gccaccggacccggcaagatctctgctaaagatgctgctgcaggagcagtagatgaggag
gacttcatcaaggcttttgaagaggttcctactatccagatccactccaacagagagatg
gaggacaacctctccaaggtccgggaggttctgtctgacgacaaaaacgactgggagcac
cgtgtcatcgctctgaagaaggtgcgttctctgctcctggctggagcgctggagtatgag
agtttccctcagcagctccgtctgctggaggcccctctgaagctgtcggctaaagacctg
aggtcccaggtggtacgagaggcctgcatcacactgggatacctgtccacgctaatgggc
aacaagtttgaccactgtgccgagaccctgatgcccacactgctcaacctggtgcccaac
agtgccaaggtgatggccacgtctggcatggcagccatacgtctcatcctcaggcataca
cactactcacgtctcatcccaatcatcactagtaactgcacgtccaaatcagtggccgtc
agacggcgcagttatgagttcctagagctgttattactggagtggcagacacacacactg
gagaggcacgtggctattctgacggagaccatcaagaaagggatccatgatgccgactca
gaggccaggtccgtggccagaaagtgttattggggtttccatggccactacagccgggaa
gcggagcatcttttccaggccctggagtcgacctatcagaaggctctccagtctcacctg
aaaagttctgacagcgttgtgtccctccaccaatcagaccgctcatcctcctcctctcag
gagagcctcaaccggcccctgtctgtcaagagtgtcataggaggcgacatgacaaggggg
aagatggtgagttccagggtgaactctaaccccggcggttctcttcagcgttcccgtagt
gacatcgacgtgaacgctgcggccagcgcgaaatcctgtctggtcaccgtgccctccgct
tctcccttcagctcagccgctactctgcccccaggctcctacgcctctctaggtcgtgtg
cgtacgaggaggacaagcgctggcagtgccgtaggagccagcgctactgtgactgacagc
agggggcgcagccgagccaaaatggtatcccagtcccagcgatccagatctgctaacccc
actggcggtggtaaggcccggacttcatccaatcagactggcagtcgctccagttcccct
ggcaagctgctgggccactcgtctgggtacgggaggatcagcaggcccccctcagcctcc
agcacccctgcagacaagaggagcaaggtcccccgcagccagggctgcagtagagattcc
tctcccagccgactgggactagcaaggagccgtatcccccggcccagcatgagtcagggc
tgcagcagggacacctctagggaaagcagccgagacaccagccctgctcggggcttcaag
cctcttgcctcccgacgtacttcccgctctaccagtgccctatccacggctgacccccac
ggccagtcagatcggtttggtttgattcaccaggaccgtatctctgcctcagtaaatgcc
atgagagtcctcaacactggcactgaggtggaggctgctgtggctgatgcactgctgtta
ggagactccagaaataataagaggaagcctatgaggcggcggtatgagtctccgggtatc
tattctgacgacgatgctaacagcgacgcatccagtgcatgctcagagcgctcatacggg
tccaggaacggaggtatccctcactacctgcgtcaaacggaggatgtggcggaggtccta
aaccactgtgccagctctaactggtcagagaggaaggaggggctgctgggtctgcagaac
ctactcaagaaccaaagaacactcagccgagtggagctgaagagactatgtgagatcttc
agcaggatgtttgcagatccacacagcaaggtgtttagtatgtttctggagactctgttg
gactttatcttggtgcatagagaagacctgcaggactggctgtttgtcctgctcacccag
ctactgaagaagatgggagctgacctgctggggtctgtccaggccaaggtccagaaggct
ctggacatcaccagggagtcttttccgtttgatcaacagttcaacatcctgatgaggttc
attgttgaccagacacagacacccaacctcaaggtgaaggtggccattctgaagtacata
gaatcactggcaagacagatggatccgacagactttgtcaactccagtgaaacccgactg
gctgtatctcgcatcattacctggaccacagagcccaagagctccgacgtcaggaaggca
gcccaggttgtgctgatctctctgtttgagctgaacactccagagttcaccatgctgctg
ggagccttgcccaagaccttccaggacggggccaccaagctgctccagaaccacctgaag
aactccagcaacaccagcagcgtgagttctcccagcaacactattgggcggaccccaagc
cggcaccccccaagccggaccagccctctcacttccccgaccaactgctcccatgggggg
ctatctcccagtatgttggagtatgacacagagaacatgaactctgatgagatctacagc
tccctgcgaggggtcacagaggccatccagagcttcagctaccgcagccaggaggacctc
aacgagttgagagggaagagggacgatgctgcgggacgggaaggtgtggcgccctctcca
ggctctgatgcccgtctggggctggatgtggttgagggtgggcgtacagccctggataac
aagacctcccttctcaacaccccatccccccgctccttctctgggccgcgaaccagggag
ttcgccccctacggatacggagacaccatcacctcatcctacgacaagagcgccctgaag
gaggccgtgtttgatgacgacgtggagcagtttagagactgccgtcggcaggacagcagt
ggtgaaaacaagatggtgctgtctaagggctttgctccaggttcccaggaccactcggac
ctggttgcagacctgctgaaggaactgtcaaatcacaatgaacgcgtggaggagcgtaaa
ggggcgttggtggagctcctgaagattacccgggaggacagcctggccgtgtgggacgaa
cacttcaagaccatcctccttctgctcctggagacactgggggataaagactacactatc
cgggccatggcactgagggtactgaaggagatactgcggaaccagccggcccgcttcaag
aactacgctgaactcaccatcatgaagaccctggaggcacacaaagactcccacaaggag
gtggtaagagcagcggaggagtctgcctccaccctggccggctccatccacccagagcag
tgtatcaaggtgctgtgtcccatcgttcagacggctgactaccccatcaacctggctgcc
atcaagatgcagaccaaggtgatcgaacgcatcaccaaggagtccctccaccagctgctg
cctgacatcataccaggactactgcagggctatgacaacacagagagtagtgttcgcaag
gccagcgtgttctgtctggtggccatctactccgtgattggagaagagctcaaaccacac
ctgcagctactcacgggcagcaagatgaagctgctgaacttgtacatcaagagggctcag
acaaccaacagcaacagcagcagttcctcggatgtctcttcacacagctag
DBGET
integrated database retrieval system
