Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380876
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Entry
139380876 CDS
T10872
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139380876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139380876
03110 Chaperones and folding catalysts [BR:
ocla03110
]
139380876
03029 Mitochondrial biogenesis [BR:
ocla03029
]
139380876
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139380876
Enzymes [BR:
ocla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
139380876
Messenger RNA biogenesis [BR:
ocla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
139380876
Chaperones and folding catalysts [BR:
ocla03110
]
Heat shock proteins
HSP60 / Chaperonin
139380876
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
139380876
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139380876
Exosomal proteins of other body fluids (saliva and urine)
139380876
Exosomal proteins of breast cancer cells
139380876
Exosomal proteins of colorectal cancer cells
139380876
Exosomal proteins of bladder cancer cells
139380876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Gag_p15
Motif
Other DBs
NCBI-GeneID:
139380876
NCBI-ProteinID:
XP_070980119
LinkDB
All DBs
Position
22:complement(38275792..38283013)
Genome browser
AA seq
576 aa
AA seq
DB search
MLRLPTVMRQMRPVCRALAPHLTRAYAKDVKFGADARAMMLKGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKCKYQNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDTISKGANPVEIRRGVMLAVETVIAELKRMSKPVTTPEEIAQVATISANGDV
EIGTIISNAMKKVGRKGVITVKDGKTLHDELEIIEGLKFDRGYISPYFINTAKGQKCEFQ
DAYVLLSEKKISTVQSIVPALELANQNRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKAQLHDMAVATGGTVFGDEAVGIALEDIQAHDFGQVGEVSVTKDDTMLLKG
KGDTASIEKRQAQIAEQLENTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRSIPALDALVPINSDQKIGIDIIRRALRVPAMTIA
KNAGVEGSLVVEKILQAAVEIGYDAMEGEYVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAECVVTELPKEEKEGGMPGGMGGMGGMGGMGGGMF
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtctacccacggtgatgagacagatgaggccagtctgcagggccctggccccc
cacctcacccgagcctacgccaaggacgtcaagtttggagccgatgctcgggccatgatg
ctgaagggagtggatctgctggctgatgctgtcgccgtcaccatgggtcccaagggtcgc
acagtaatcatcgagcagagctggggcagccccaaggtgaccaaggacggcgtcactgta
gccaaggccattgacctgaagtgcaagtaccagaacatcggtgccaagctggtccaggac
gtggccaacaacacaaacgaggaagcaggagatggcaccactaccgccaccgtgctggcc
agagccatcgccaaggagggctttgacaccattagtaaaggcgctaaccctgtggagatc
cgccgtggcgtcatgctggctgtggagaccgtcattgctgaactgaagaggatgtctaag
ccagtcaccacacctgaggagattgcccaggtggccaccatctctgctaatggagacgtg
gagatcggcaccatcatctccaacgccatgaaaaaagtgggccgtaagggagtcatcact
gtcaaggatggcaaaactctgcatgatgagcttgagatcattgaggggctgaagttcgac
cgcggatacatctcaccttacttcatcaacacagccaaaggccagaagtgtgagtttcag
gatgcctatgtgttgctgagtgagaagaagatctccactgtccagagcatcgtccctgcc
ctggaattggccaaccagaaccggaaacctctggtcatcgtggctgaggatgtggacgga
gaggccctcagcaccctggttctcaacaggctgaaggtgggactacaagtggtggcagtc
aaggccccaggctttggagacaacaggaaggcccagctgcacgacatggccgtggccacc
gggggcactgtgtttggtgatgaggcggtgggcattgctctggaggacatccaggcacat
gactttggccaggtgggcgaggtgtcagtgaccaaggacgacaccatgctgctgaagggg
aagggagacacggcatccatcgagaagaggcaggctcagatcgctgagcagctggagaac
accaccagcgattacgagaaggagaagctcaacgaaaggctggccaagctgtctgacgga
gtggctgtgctcaaggtgggaggaacgagtgatgtggaggtgaatgagaagaaggaccgt
gtgaccgacgccctgaatgccaccagggccgctgtggaggagggcatcgtgcccgggggt
ggctgtgccctgctgcgctcaatccctgccctggatgccctcgtgcccatcaactctgac
cagaagattggaattgacatcatcagacgagctctgcgtgtgccagccatgacaattgct
aagaacgctggtgtggagggctctctagtggtagagaagatccttcaggccgcggtggag
atcggctacgatgccatggaaggagagtacgtcaacatggtagagaagggcatcattgac
cccaccaaggtggtgaggactgcactaatggatgctgcaggtgtcgcatctcttctctcc
actgctgagtgtgtggtcacagagctgcccaaggaggagaaggagggtggcatgccagga
ggtatgggcggcatgggaggtatgggaggtatgggcggtggcatgttctga
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