Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380904
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Entry
139380904 CDS
T10872
Name
(RefSeq) cyclin-T2-like
KO
K15188
cyclin T
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
139380904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocla03021
]
139380904
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
139380904
Brd4/P-TEFb complex
139380904
7SK RNP complex
139380904
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CycT2-like_C
Cyclin_N
Motif
Other DBs
NCBI-GeneID:
139380904
NCBI-ProteinID:
XP_070980160
LinkDB
All DBs
Position
22:40403728..40412245
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AA seq
665 aa
AA seq
DB search
MAACRGSSSKWFFTREQLEATPSRRTGVEPDRELSYRQQAANLIQDMGQRLNVSQLTINT
AIVYMHRFYMYHSFTKFHRNIISPTTLFLAAKVEEQPRKLEHVIKVSHACLNPQEAPLDT
KSNAYLQQAQELVILETIVLQTLGFEITIEHPHTDVVKCSQLVRASKDLAQTSYFMATNS
LHLTTFCLQHKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDNSVTLELLDELTHDF
LQILEKTPSRLKRIRNWRATQAAKKPKGDGSQANDPYPGPSLVHEHSLGDGIPGVSNSAF
SKAAASFPVPLPGHASGPLSLDSIASMQGSSYTFTAPSDWPQDMGGRSEGGGYSLKTDTL
GLQQGASLSLQHGSLNPHRPDKTMEFNPIKHEHKAVAGGGKQQQQQPPPAQKMSLDKYRE
KHAAELAVQQKRKQTEQQAMEPEGRDAYIPSVQSDHRKHMQPPSNPGSSSSGTTSSPLKM
KLAVLGQDRLPSDKRDKGGSLKLRLPVPSQGGMASKEELKMKIKVSSERHSSSDEGGPKS
KHSSPLVSKEKHRDQSAHRHHKQHGHSQLHAAQHSGNGRGGLEGPAGVGPALLRSPLGLG
NVEGLAGPALASVSSSSRKRAHPNVAGHNHHSSKTSKSSKGGAGGLRTSQHPSETGQEAS
GEPRP
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtgccggggatcctcgtcgaaatggtttttcacccgggagcagcttgaagcc
acgccgtcccgccgtacgggagtggagccggatagagagctttcttaccgacagcaggcg
gcaaacctcattcaagatatgggccagagactcaacgtctcacaacttactataaataca
gcaattgtttacatgcatagattttatatgtaccactctttcaccaaattccacagaaat
ataatttctccaaccacattattcctagctgcaaaagttgaagagcaacctcggaaactg
gagcatgttattaaggtttcacatgcttgtctaaaccctcaagaggccccgcttgatacg
aagagtaatgcatacctccagcaagctcaagagctggtgatacttgaaaccatagtgctg
cagactttaggatttgaaataactatagaacatccacacactgatgtggtgaaatgttcc
cagctagtgagagcaagcaaggatctggcacagacttcctatttcatggctaccaacagc
ctccacctcaccacgttctgcctgcagcacaagcccacagtcatcgcctgcgtctgcatc
cacctggcctgtaaatggtccaactgggagatccccgtctccactgatgggaaacactgg
tgggagtacgtggacaactctgtcacgctggagcttctcgatgaactgacacacgacttc
cttcagattctggagaagacgccgagcaggttgaagaggatacggaactggagggccaca
caagctgccaagaagcccaagggagatggctctcaggcgaacgacccctacccaggaccc
tccctggtccacgaacattccctgggagacggcatccctggggtctccaactcagccttc
tccaaagccgccgcctcgttccctgtcccactgccgggtcacgccagtggacccctctcc
ctggactccatcgcctccatgcagggcagctcctacaccttcaccgcccccagcgactgg
ccccaggacatggggggtcgctcggagggaggaggatattccctcaaaacagatacacta
ggcctccagcagggggcttcactgtctctgcagcacggctctctgaacccacacagacca
gataagaccatggagttcaaccctattaaacatgaacacaaggctgtagcggggggggga
aagcagcagcaacagcagcccccgcctgcccagaaaatgtccctggacaaatacagagag
aagcacgctgccgagctggcggtgcagcagaaacgcaaacagacagagcagcaggctatg
gagcctgagggcagggatgcctatataccctctgtccagtcagaccacaggaaacacatg
cagcccccctctaacccagggagcagcagcagcggcaccacttcatctcctcttaaaatg
aagctggccgttttaggccaagacaggctcccctctgacaaacgggacaaggggggctca
ctcaaactccgcctcccagttccttctcaggggggcatggccagcaaagaggagctgaag
atgaaaatcaaggtgtcctctgagcgccacagctcttctgatgagggtgggcccaaaagc
aaacattccagcccgctggtgagcaaggagaagcatcgggaccagtctgcccaccgccac
cacaagcagcacggacactctcagctccacgcagcacagcacagcggcaatggccgaggg
ggccttgaggggcctgcaggtgtcgggccggccctcctccggagccccctggggctaggg
aacgttgaggggttggcgggcccggcccttgcttctgtttccagttcctcccgcaagagg
gcacaccccaacgttgccggccacaaccaccactcctccaaaacgagcaaaagctccaag
ggcggcgcaggtgggctacggacatctcagcaccctagtgaaactggacaagaagccagt
ggagagccgcggccctga
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