Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380936
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Entry
139380936 CDS
T10872
Name
(RefSeq) glypican-6-like
KO
K08112
glypican 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ocla00535
]
139380936
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ocla00537
]
139380936
Proteoglycans [BR:
ocla00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
139380936
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ocla00537
]
Others
139380936
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GFIT
Motif
Pfam:
Glypican
Put_Phosphatase
Fz
Serglycin
DUF5856
Sec8_C
Motif
Other DBs
NCBI-GeneID:
139380936
NCBI-ProteinID:
XP_070980208
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Position
22:43159486..43314713
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AA seq
560 aa
AA seq
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MLGIRTVLWTLSVALSVVTGADFKAHNCSEVRQASIAKGFSFENVPLQETSGDHLRVCPQ
GSTCCTSEMEDKFGQRSKLELENLVDETSHELRSTFVSRHKKFDEFFLELLENTEKSLNE
MFVRTYGKPYMQNSEVFQNLFAELKRYYTGGNVNLEEMLNDFWSRLLERMFTLLNSQYVI
TEDYLECISKYTDQLKPFGDVPKKLKAQVTRAFIVARTFVQGLSVGREVASRVSKVSSTP
ACIRALTKMMYCPYCQAMPSVKPCNNYCLNVMKGCLANQADLDPEWNQYIDAMLLVAQRL
EGPFNIESVMEPIDVKISEAIMNMQDNSVQLSYKVFQGCGQPKPSGMGGRSTRGISDVFN
ARFRPYSPEERPTTAAGTSLDRLLIDIKEKLKLFKKFWSNLPEDICKPHRLTAGNATDDD
QCWNGHTKGRYFPEVLKDGLTNQVNNPEVGVDITRPDTFIRQQIMALRVMTNKLKNAYNG
NDIYFQDSSDEGSGSGSGSGCTEACVTEFDFASTEAPVVGADRSGSGPMEDSAAATHPAP
SAALLASLALSALALHRLWR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgttgggaatacggaccgtcctatggactttatctgtggcgctgtccgttgtcactgga
gcagattttaaagcacataactgcagtgaggttagacaagcttcaatcgcaaaaggcttc
agctttgaaaatgttcctctgcaagaaacgtcaggcgaccatcttcgtgtatgtcctcaa
gggagcacctgttgcacctctgaaatggaggacaagtttggccaacggagcaagctggag
ttggagaacctggtcgatgaaactagtcatgaattacgaagcacctttgtctccagacat
aaaaagtttgacgagttcttcctggagttgttggagaacacggagaagtctttgaacgag
atgttcgtgcggacctacggaaagccgtacatgcagaactcggaggtgttccagaacctg
tttgccgagctgaaacgctactacacgggaggcaacgtcaacctggaggagatgctcaac
gacttctggtcgcggctgctggagcgcatgttcacactgctcaactcccagtacgtcatc
actgaggactatttggagtgcatcagtaagtacacggaccagctcaagccctttggagac
gtacccaagaagctcaaggctcaggttaccagggctttcatcgtggcacgcactttcgtc
cagggcctctcggtcggtagagaggtggccagcagggtgtccaaggtgagcagcacccca
gcgtgtatccgagctctgaccaagatgatgtactgcccatactgccaagccatgccctcc
gtgaagccctgcaacaactattgtctgaatgtcatgaagggctgcctcgccaaccaggct
gatctggacccagagtggaaccagtacatcgatgccatgttgctggtggcacagaggctg
gagggacccttcaacattgagtctgtcatggagcccattgatgtgaagatttcagaggcc
atcatgaatatgcaagacaacagcgtccagctctcctacaaggtttttcaaggctgcggc
cagccaaagccctcaggaatgggtggcaggtctacccgcggcatttcggatgtgttcaac
gcccgtttcaggccctacagcccagaggagcggcccaccactgcagctggcaccagcctg
gacagactgttgattgacatcaaggagaaactgaagctgttcaagaagttctggtccaac
ctgcctgaggacatctgcaagccacacaggttgacagcagggaatgccaccgatgatgac
cagtgttggaatgggcacaccaagggcaggtatttcccagaggttctgaaagacggattg
accaatcaggtgaataaccctgaggtgggcgtggacatcaccaggccggacacgttcatt
cgccagcagatcatggctctgagagtgatgacaaacaagttaaaaaatgcctacaatggc
aatgatatctactttcaagactcaagcgacgagggcagtggctcgggcagtggcagcggc
tgcacggaggcctgcgtcactgagtttgactttgccagcaccgaggccccggtggtggga
gcggaccggagcgggagtggcccgatggaggattcagcagcagccacacaccctgccccc
tcagcagccctgctggccagcctggccctttcagccctggcactgcacagactatggaga
taa
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